FFCP PHASE1:Mm9::chr15:67008386..67008403,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20442 | |EntrezGene=20442 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=122 | |||
|TSSclassifier=NA | |||
|UniProt=P54751,Q544T4 | |UniProt=P54751,Q544T4 | ||
|association_with_transcript=40bp_to_NM_009177,uc007wba.1,uc007wbb.1_5end | |association_with_transcript=40bp_to_NM_009177,uc007wba.1,uc007wbb.1_5end | ||
|cluster_id=chr15:67008386..67008403,- | |||
|description=CAGE_peak_3_at_St3gal1_5end | |description=CAGE_peak_3_at_St3gal1_5end | ||
|id=chr15:67008386..67008403,- | |id=chr15:67008386..67008403,- | ||
|ontology_enrichment_celltype=CL:0000988!3.00e-07!32;CL:0002032!3.00e-07!32;CL:0000037!3.00e-07!32;CL:0000566!3.00e-07!32;CL:0000837!3.00e-07!32;CL:0002031!7.65e-07!25 | |ontology_enrichment_celltype=CL:0000988!3.00e-07!32;CL:0002032!3.00e-07!32;CL:0000037!3.00e-07!32;CL:0000566!3.00e-07!32;CL:0000837!3.00e-07!32;CL:0002031!7.65e-07!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0002031,8.79e-08,25;CL:0000988,1.01e-07,32;CL:0002032,1.01e-07,32;CL:0000037,1.01e-07,32;CL:0000837,1.01e-07,32;CL:0000838,9.82e-07,12 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.67e-12!45;UBERON:0003061!5.67e-12!45;UBERON:0002193!7.29e-11!48;UBERON:0004177!7.60e-10!29;UBERON:0002405!5.40e-08!70;UBERON:0002370!3.60e-07!23;UBERON:0000974!3.60e-07!23;UBERON:0004807!3.60e-07!23;UBERON:0005058!3.60e-07!23;UBERON:0003351!3.60e-07!23;UBERON:0009113!3.60e-07!23;UBERON:0003295!3.60e-07!23;UBERON:0009722!3.60e-07!23;UBERON:0005562!3.60e-07!23;UBERON:0007690!3.60e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.00e-13,45;UBERON:0003061,5.00e-13,45;UBERON:0002193,3.17e-12,48;UBERON:0002405,3.17e-12,48;UBERON:0004177,7.50e-11,29;UBERON:0005057,7.50e-11,29;UBERON:0002370,5.92e-08,23;UBERON:0000974,5.92e-08,23;UBERON:0004807,5.92e-08,23;UBERON:0005058,5.92e-08,23;UBERON:0003351,5.92e-08,23;UBERON:0009113,5.92e-08,23;UBERON:0003295,5.92e-08,23;UBERON:0009722,5.92e-08,23;UBERON:0005562,5.92e-08,23;UBERON:0007690,5.92e-08,23;UBERON:0006562,3.36e-07,24;UBERON:0003408,3.36e-07,24;UBERON:0001557,3.36e-07,24;UBERON:0001042,3.36e-07,24;UBERON:0008814,3.36e-07,24;UBERON:0009145,3.36e-07,24;UBERON:0000077,4.08e-07,35 | |||
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| ||
|short_description=p3@St3gal1 | |short_description=p3@St3gal1 | ||
}} | }} |
Latest revision as of 22:22, 26 September 2015
Short description: | p3@St3gal1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_St3gal1_5end |
Coexpression cluster: | MCL_coexpression_mm9:122 |
Association with transcript: | 40bp_to_NM_009177, uc007wba.1, uc007wbb.1_5end |
EntrezGene: | St3gal1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 8.79e-08 | 25 |
hematopoietic cell | 1.01e-07 | 32 |
hematopoietic oligopotent progenitor cell | 1.01e-07 | 32 |
hematopoietic stem cell | 1.01e-07 | 32 |
hematopoietic multipotent progenitor cell | 1.01e-07 | 32 |
lymphoid lineage restricted progenitor cell | 9.82e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.00e-13 | 45 |
blood island | 5.00e-13 | 45 |
hemolymphoid system | 3.17e-12 | 48 |
immune system | 3.17e-12 | 48 |
hemopoietic organ | 7.50e-11 | 29 |
immune organ | 7.50e-11 | 29 |
thymus | 5.92e-08 | 23 |
neck | 5.92e-08 | 23 |
respiratory system epithelium | 5.92e-08 | 23 |
hemolymphoid system gland | 5.92e-08 | 23 |
pharyngeal epithelium | 5.92e-08 | 23 |
thymic region | 5.92e-08 | 23 |
pharyngeal gland | 5.92e-08 | 23 |
entire pharyngeal arch endoderm | 5.92e-08 | 23 |
thymus primordium | 5.92e-08 | 23 |
early pharyngeal endoderm | 5.92e-08 | 23 |
pharynx | 3.36e-07 | 24 |
gland of gut | 3.36e-07 | 24 |
upper respiratory tract | 3.36e-07 | 24 |
chordate pharynx | 3.36e-07 | 24 |
pharyngeal arch system | 3.36e-07 | 24 |
pharyngeal region of foregut | 3.36e-07 | 24 |
mixed endoderm/mesoderm-derived structure | 4.08e-07 | 35 |