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{{DOID
{{DOID
|id=DOID:1325
|alt_id=
|name=bronchus cancer
|namespace=
|def=
|xref=
|is_a=DOID:1324
|synonym="malignant neoplasm of bronchus and lung, unspecified" EXACT [ICD9CM_2006:162.9];;"malignant neoplasm of bronchus or lung NOS (disorder)" EXACT [SNOMEDCT_2005_07_31:269465004];;"malignant neoplasm of bronchus or lung, unspecified (disorder)" EXACT [SNOMEDCT_2005_07_31:190092003]
|comment=
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|alt_id=
|disjoint_from=
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|obo_creation_date=
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|id=DOID:1325
|is_a=DOID:1324
|is_obsolete=
|located_in=
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|name=bronchus cancer
|namespace=FANTOM
|obo_creation_date=
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|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|subset=
|synonym="malignant neoplasm of bronchus and lung, unspecified" EXACT [ICD9CM_2006:162.9];;"malignant neoplasm of bronchus or lung NOS (disorder)" EXACT [SNOMEDCT_2005_07_31:269465004];;"malignant neoplasm of bronchus or lung, unspecified (disorder)" EXACT [SNOMEDCT_2005_07_31:190092003]
|union_of=
|xref=ICD9CM:162.9;;SNOMEDCT_2010_1_31:187875007;;SNOMEDCT_2010_1_31:190092003;;SNOMEDCT_2010_1_31:269465004;;UMLS_CUI:C0348343
}}
}}

Latest revision as of 16:48, 12 September 2014

Name:bronchus cancer
Namespace:FANTOM
Xrefs:
links:

ICD9CM:162.9
SNOMEDCT_2010_1_31:187875007
SNOMEDCT_2010_1_31:190092003
SNOMEDCT_2010_1_31:269465004

UMLS_CUI:C0348343
Synonyms: "malignant neoplasm of bronchus and lung, unspecified" EXACT [ICD9CM_2006:162.9]
"malignant neoplasm of bronchus or lung NOS (disorder)" EXACT [SNOMEDCT_2005_07_31:269465004]
"malignant neoplasm of bronchus or lung, unspecified (disorder)" EXACT [SNOMEDCT_2005_07_31:190092003]

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:DOID:1324(lung cancer)



Children


is a:DOID:3904 (bronchogenic carcinoma)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:1325 (bronchus cancer), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
4.76e-57FFCP PHASE2:Hg19::chr6:45399533..45399540,+#_ce48738c62d3333ff2f6d2b34f669c50p@chr6:45399533..45399540, +
4.76e-57FFCP PHASE1:Hg19::chr6:45399294..45399301,+#_ce48738c62d3333ff2f6d2b34f669c50p@chr6:45399294..45399301, +
4.76e-57FFCP PHASE2:Hg19::chr6:45405393..45405412,+#_ce48738c62d3333ff2f6d2b34f669c50p@chr6:45405393..45405412, +
4.76e-57FFCP PHASE2:Hg19::chr6:45399263..45399274,+#_ce48738c62d3333ff2f6d2b34f669c50p@chr6:45399263..45399274, +
4.76e-57FFCP PHASE2:Hg19::chr6:125378873..125378876,+#_ce48738c62d3333ff2f6d2b34f669c50p@chr6:125378873..125378876, +
4.76e-57FFCP PHASE1:Hg19::chr6:45405332..45405343,+#_ce48738c62d3333ff2f6d2b34f669c50p@chr6:45405332..45405343, +
4.76e-57FFCP PHASE1:Hg19::chr6:45399245..45399258,+#_ce48738c62d3333ff2f6d2b34f669c50p@chr6:45399245..45399258, +
4.76e-57FFCP PHASE1:Hg19::chr6:45399533..45399540,+#_ce48738c62d3333ff2f6d2b34f669c50p@chr6:45399533..45399540, +
4.76e-57FFCP PHASE2:Hg19::chr6:45399294..45399301,+#_ce48738c62d3333ff2f6d2b34f669c50p@chr6:45399294..45399301, +
4.76e-57FFCP PHASE1:Hg19::chr6:45405393..45405412,+#_ce48738c62d3333ff2f6d2b34f669c50p@chr6:45405393..45405412, +
4.76e-57FFCP PHASE1:Hg19::chr6:45399263..45399274,+#_ce48738c62d3333ff2f6d2b34f669c50p@chr6:45399263..45399274, +
4.76e-57FFCP PHASE1:Hg19::chr6:125378873..125378876,+#_ce48738c62d3333ff2f6d2b34f669c50p@chr6:125378873..125378876, +
4.76e-57FFCP PHASE2:Hg19::chr6:45405332..45405343,+#_ce48738c62d3333ff2f6d2b34f669c50p@chr6:45405332..45405343, +
4.76e-57FFCP PHASE2:Hg19::chr6:45399245..45399258,+#_ce48738c62d3333ff2f6d2b34f669c50p@chr6:45399245..45399258, +
1.49e-38FFCP PHASE1:Hg19::chr6:45399724..45399733,+#_b5aa4a1e098d01cde551406e1db2f153p@chr6:45399724..45399733, +
1.49e-38FFCP PHASE1:Hg19::chr6:73786593..73786601,+#_b5aa4a1e098d01cde551406e1db2f153p@chr6:73786593..73786601, +
1.49e-38FFCP PHASE1:Hg19::chr6:45399422..45399430,+#_b5aa4a1e098d01cde551406e1db2f153p@chr6:45399422..45399430, +
1.49e-38FFCP PHASE1:Hg19::chr6:73786620..73786627,+#_b5aa4a1e098d01cde551406e1db2f153p@chr6:73786620..73786627, +
1.49e-38FFCP PHASE2:Hg19::chr8:40525350..40525354,-#_b5aa4a1e098d01cde551406e1db2f153p@chr8:40525350..40525354, -
1.49e-38FFCP PHASE2:Hg19::chr6:45399724..45399733,+#_b5aa4a1e098d01cde551406e1db2f153p@chr6:45399724..45399733, +
1.49e-38FFCP PHASE2:Hg19::chr6:73786593..73786601,+#_b5aa4a1e098d01cde551406e1db2f153p@chr6:73786593..73786601, +
1.49e-38FFCP PHASE2:Hg19::chr6:45399422..45399430,+#_b5aa4a1e098d01cde551406e1db2f153p@chr6:45399422..45399430, +
1.49e-38FFCP PHASE1:Hg19::chr8:40525350..40525354,-#_b5aa4a1e098d01cde551406e1db2f153p@chr8:40525350..40525354, -
1.49e-38FFCP PHASE2:Hg19::chr6:73786620..73786627,+#_b5aa4a1e098d01cde551406e1db2f153p@chr6:73786620..73786627, +
1.8e-38FFCP PHASE2:Hg19::chr18:10085554..10085562,+#_56a3faba1a472007fb8d88e1c18523d7p@chr18:10085554..10085562, +
1.8e-38FFCP PHASE1:Hg19::chr18:10085554..10085562,+#_56a3faba1a472007fb8d88e1c18523d7p@chr18:10085554..10085562, +
2.18e-38FFCP PHASE2:Hg19::chr2:233352641..233352675,+#_77e220dbff3f2a7369f3b5ad85083a57p@chr2:233352641..233352675, +
2.18e-38FFCP PHASE1:Hg19::chr2:233352641..233352675,+#_77e220dbff3f2a7369f3b5ad85083a57p@chr2:233352641..233352675, +
1.14e-32FFCP PHASE2:Hg19::chr14:106916169..106916203,+#_5e7202742a66b7b462faf1dac721969ep@chr14:106916169..106916203, +
1.14e-32FFCP PHASE1:Hg19::chr14:106916169..106916203,+#_5e7202742a66b7b462faf1dac721969ep@chr14:106916169..106916203, +
1.78e-29FFCP PHASE2:Hg19::chr13:26155734..26155742,+#_1b95cd093abad85ff1daec551ffc50b7p@chr13:26155734..26155742, +
1.78e-29FFCP PHASE1:Hg19::chr7:84651827..84651832,-#_1b95cd093abad85ff1daec551ffc50b7p@chr7:84651827..84651832, -
1.78e-29FFCP PHASE1:Hg19::chr7:120383546..120383560,+#_1b95cd093abad85ff1daec551ffc50b7p@chr7:120383546..120383560, +
1.78e-29FFCP PHASE1:Hg19::chr4:107955476..107955508,-#_1b95cd093abad85ff1daec551ffc50b7p@chr4:107955476..107955508, -
1.78e-29FFCP PHASE2:Hg19::chr7:26590563..26590574,-#_1b95cd093abad85ff1daec551ffc50b7p@chr7:26590563..26590574, -
1.78e-29FFCP PHASE2:Hg19::chr2:135119636..135119642,+#_1b95cd093abad85ff1daec551ffc50b7p@chr2:135119636..135119642, +
1.78e-29FFCP PHASE2:Hg19::chr8:97972117..97972120,-#_1b95cd093abad85ff1daec551ffc50b7p@chr8:97972117..97972120, -
1.78e-29FFCP PHASE1:Hg19::chr8:116215335..116215378,+#_1b95cd093abad85ff1daec551ffc50b7p@chr8:116215335..116215378, +
1.78e-29FFCP PHASE1:Hg19::chr2:222160741..222160750,+#_1b95cd093abad85ff1daec551ffc50b7p@chr2:222160741..222160750, +
1.78e-29FFCP PHASE1:Hg19::chr18:10085817..10085825,+#_1b95cd093abad85ff1daec551ffc50b7p@chr18:10085817..10085825, +
1.78e-29FFCP PHASE1:Hg19::chr14:60194070..60194083,-#_1b95cd093abad85ff1daec551ffc50b7p25@RTN1
1.78e-29FFCP PHASE2:Hg19::chr7:79840323..79840338,+#_1b95cd093abad85ff1daec551ffc50b7p@chr7:79840323..79840338, +
1.78e-29FFCP PHASE2:Hg19::chr7:111234799..111234807,-#_1b95cd093abad85ff1daec551ffc50b7p@chr7:111234799..111234807, -
1.78e-29FFCP PHASE1:Hg19::chr13:76563913..76563916,+#_1b95cd093abad85ff1daec551ffc50b7p@chr13:76563913..76563916, +
1.78e-29FFCP PHASE2:Hg19::chr12:84664687..84664694,+#_1b95cd093abad85ff1daec551ffc50b7p4@ENST00000547882
1.78e-29FFCP PHASE1:Hg19::chr7:39018314..39018323,+#_1b95cd093abad85ff1daec551ffc50b7p@chr7:39018314..39018323, +
1.78e-29FFCP PHASE1:Hg19::chr4:185426203..185426209,-#_1b95cd093abad85ff1daec551ffc50b7p@chr4:185426203..185426209, -
1.78e-29FFCP PHASE1:Hg19::chr13:95133382..95133389,-#_1b95cd093abad85ff1daec551ffc50b7p@chr13:95133382..95133389, -
1.78e-29FFCP PHASE2:Hg19::chr8:39970826..39970832,+#_1b95cd093abad85ff1daec551ffc50b7p@chr8:39970826..39970832, +
1.78e-29FFCP PHASE2:Hg19::chr15:71685918..71685922,-#_1b95cd093abad85ff1daec551ffc50b7p@chr15:71685918..71685922, -
1.78e-29FFCP PHASE1:Hg19::chr8:98065877..98065881,-#_1b95cd093abad85ff1daec551ffc50b7p@chr8:98065877..98065881, -
1.78e-29FFCP PHASE2:Hg19::chr8:57525935..57525942,+#_1b95cd093abad85ff1daec551ffc50b7p@chr8:57525935..57525942, +
1.78e-29FFCP PHASE2:Hg19::chr17:39140393..39140399,-#_1b95cd093abad85ff1daec551ffc50b7p3@KRT40
1.78e-29FFCP PHASE1:Hg19::chr20:13085064..13085070,+#_1b95cd093abad85ff1daec551ffc50b7p@chr20:13085064..13085070, +
1.78e-29FFCP PHASE1:Hg19::chr17:13574618..13574636,-#_1b95cd093abad85ff1daec551ffc50b7p@chr17:13574618..13574636, -
1.78e-29FFCP PHASE2:Hg19::chr6:140771120..140771128,+#_1b95cd093abad85ff1daec551ffc50b7p@chr6:140771120..140771128, +
1.78e-29FFCP PHASE2:Hg19::chr2:234862436..234862439,+#_1b95cd093abad85ff1daec551ffc50b7p16@TRPM8
1.78e-29FFCP PHASE2:Hg19::chr1:100110807..100110818,+#_1b95cd093abad85ff1daec551ffc50b7p@chr1:100110807..100110818, +
1.78e-29FFCP PHASE1:Hg19::chr2:220594710..220594720,+#_1b95cd093abad85ff1daec551ffc50b7p3@ENST00000442416
1.78e-29FFCP PHASE1:Hg19::chr2:103235329..103235342,+#_1b95cd093abad85ff1daec551ffc50b7p@chr2:103235329..103235342, +
1.78e-29FFCP PHASE1:Hg19::chr14:58439259..58439262,-#_1b95cd093abad85ff1daec551ffc50b7p@chr14:58439259..58439262, -
1.78e-29FFCP PHASE2:Hg19::chr7:7749088..7749127,+#_1b95cd093abad85ff1daec551ffc50b7p@chr7:7749088..7749127, +
1.78e-29FFCP PHASE2:Hg19::chr4:39301903..39301910,-#_1b95cd093abad85ff1daec551ffc50b7p@chr4:39301903..39301910, -
1.78e-29FFCP PHASE2:Hg19::chr3:95401565..95401581,-#_1b95cd093abad85ff1daec551ffc50b7p2@ENST00000463799
1.78e-29FFCP PHASE2:Hg19::chr12:79756349..79756364,-#_1b95cd093abad85ff1daec551ffc50b7p@chr12:79756349..79756364, -
1.78e-29FFCP PHASE1:Hg19::chr12:58158560..58158567,-#_1b95cd093abad85ff1daec551ffc50b7p@chr12:58158560..58158567, -
1.78e-29FFCP PHASE2:Hg19::chr3:150914192..150914197,+#_1b95cd093abad85ff1daec551ffc50b7p@chr3:150914192..150914197, +
1.78e-29FFCP PHASE1:Hg19::chr8:97964849..97964868,-#_1b95cd093abad85ff1daec551ffc50b7p@chr8:97964849..97964868, -
1.78e-29FFCP PHASE1:Hg19::chr3:102635473..102635480,-#_1b95cd093abad85ff1daec551ffc50b7p@chr3:102635473..102635480, -
1.78e-29FFCP PHASE2:Hg19::chrX:48394285..48394295,+#_1b95cd093abad85ff1daec551ffc50b7p@chrX:48394285..48394295, +
1.78e-29FFCP PHASE2:Hg19::chr7:95775942..95775990,-#_1b95cd093abad85ff1daec551ffc50b7p@chr7:95775942..95775990, -
1.78e-29FFCP PHASE1:Hg19::chr10:129704562..129704569,+#_1b95cd093abad85ff1daec551ffc50b7p@chr10:129704562..129704569, +
1.78e-29FFCP PHASE2:Hg19::chr19:46531064..46531073,+#_1b95cd093abad85ff1daec551ffc50b7p@chr19:46531064..46531073, +
1.78e-29FFCP PHASE1:Hg19::chr7:79840276..79840283,+#_1b95cd093abad85ff1daec551ffc50b7p@chr7:79840276..79840283, +
1.78e-29FFCP PHASE1:Hg19::chr18:6928495..6928520,-#_1b95cd093abad85ff1daec551ffc50b7p2@LOC400643
1.78e-29FFCP PHASE1:Hg19::chr5:6961030..6961034,+#_1b95cd093abad85ff1daec551ffc50b7p@chr5:6961030..6961034, +
1.78e-29FFCP PHASE1:Hg19::chr12:15722105..15722121,+#_1b95cd093abad85ff1daec551ffc50b7p@chr12:15722105..15722121, +
1.78e-29FFCP PHASE2:Hg19::chr2:97626375..97626385,-#_1b95cd093abad85ff1daec551ffc50b7p@chr2:97626375..97626385, -
1.78e-29FFCP PHASE2:Hg19::chr14:60194267..60194275,-#_1b95cd093abad85ff1daec551ffc50b7p20@RTN1
1.78e-29FFCP PHASE2:Hg19::chr13:76688920..76688924,+#_1b95cd093abad85ff1daec551ffc50b7p@chr13:76688920..76688924, +
1.78e-29FFCP PHASE1:Hg19::chr7:95766136..95766143,-#_1b95cd093abad85ff1daec551ffc50b7p@chr7:95766136..95766143, -
1.78e-29FFCP PHASE1:Hg19::chr2:208001650..208001675,-#_1b95cd093abad85ff1daec551ffc50b7p@chr2:208001650..208001675, -
1.78e-29FFCP PHASE2:Hg19::chr3:86701921..86701925,-#_1b95cd093abad85ff1daec551ffc50b7p@chr3:86701921..86701925, -
1.78e-29FFCP PHASE2:Hg19::chr17:59657604..59657621,-#_1b95cd093abad85ff1daec551ffc50b7p@chr17:59657604..59657621, -
1.78e-29FFCP PHASE2:Hg19::chr8:98104439..98104444,-#_1b95cd093abad85ff1daec551ffc50b7p@chr8:98104439..98104444, -
1.78e-29FFCP PHASE2:Hg19::chr8:1616323..1616360,+#_1b95cd093abad85ff1daec551ffc50b7p@chr8:1616323..1616360, +
1.78e-29FFCP PHASE2:Hg19::chr5:33619084..33619089,-#_1b95cd093abad85ff1daec551ffc50b7p@chr5:33619084..33619089, -
1.78e-29FFCP PHASE2:Hg19::chr3:145094664..145094665,+#_1b95cd093abad85ff1daec551ffc50b7p@chr3:145094664..145094665, +
1.78e-29FFCP PHASE2:Hg19::chr11:31093041..31093047,-#_1b95cd093abad85ff1daec551ffc50b7p@chr11:31093041..31093047, -
1.78e-29FFCP PHASE1:Hg19::chr2:234862409..234862414,+#_1b95cd093abad85ff1daec551ffc50b7p14@TRPM8
1.78e-29FFCP PHASE2:Hg19::chrX:154251771..154251775,-#_1b95cd093abad85ff1daec551ffc50b7p@chrX:154251771..154251775, -
1.78e-29FFCP PHASE1:Hg19::chr10:129703363..129703373,+#_1b95cd093abad85ff1daec551ffc50b7p@chr10:129703363..129703373, +
1.78e-29FFCP PHASE1:Hg19::chr11:98528704..98528712,+#_1b95cd093abad85ff1daec551ffc50b7p@chr11:98528704..98528712, +
1.78e-29FFCP PHASE2:Hg19::chr10:129704512..129704515,+#_1b95cd093abad85ff1daec551ffc50b7p@chr10:129704512..129704515, +
1.78e-29FFCP PHASE1:Hg19::chr9:97856010..97856019,+#_1b95cd093abad85ff1daec551ffc50b7p@chr9:97856010..97856019, +
1.78e-29FFCP PHASE1:Hg19::chr4:37653629..37653673,-#_1b95cd093abad85ff1daec551ffc50b7p@chr4:37653629..37653673, -
1.78e-29FFCP PHASE1:Hg19::chr3:87647430..87647437,-#_1b95cd093abad85ff1daec551ffc50b7p@chr3:87647430..87647437, -
1.78e-29FFCP PHASE1:Hg19::chr21:38295313..38295326,-#_1b95cd093abad85ff1daec551ffc50b7p@chr21:38295313..38295326, -
1.78e-29FFCP PHASE1:Hg19::chr12:84126726..84126727,-#_1b95cd093abad85ff1daec551ffc50b7p@chr12:84126726..84126727, -
1.78e-29FFCP PHASE2:Hg19::chr6:125378772..125378777,+#_1b95cd093abad85ff1daec551ffc50b7p@chr6:125378772..125378777, +

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