DOID:5409: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{DOID
|id=DOID:5409
|name=lung small cell carcinoma
|namespace=
|def=
|xref=
|is_a=DOID:3905
|synonym="Oat cell carcinoma of lung (disorder)" EXACT [SNOMEDCT_2005_07_3...") |
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| | |comment=OMIM mapping confirmed by DO. [SN]. | ||
|created_by= | |created_by= | ||
| | |def= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=DOID:5409 | |||
|is_a=DOID:3905 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=lung small cell carcinoma | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of= | |part_of= | ||
|preceded_by= | |||
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo | |||
|subset= | |||
|synonym="Oat cell carcinoma of lung (disorder)" EXACT [SNOMEDCT_2005_07_31:254633006];;"SCLC" EXACT [CSP2005:2017-6589];;"small cell carcinoma of lung" RELATED [];;"small cell carcinoma of lung (disorder)" EXACT [SNOMEDCT_2005_07_31:254632001];;"small cell neuroendocrine carcinoma of lung" EXACT [NCI2004_11_17:C4917] | |||
|union_of= | |||
|xref=MSH:D055752;;NCI:C4917;;OMIM:182280;;SNOMEDCT_2010_1_31:254632001;;SNOMEDCT_2010_1_31:254633006;;UMLS_CUI:C0149925 | |||
}} | }} |
Latest revision as of 16:52, 12 September 2014
Name: | lung small cell carcinoma | ||
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Namespace: | FANTOM | ||
Xrefs: |
| ||
Synonyms: |
"Oat cell carcinoma of lung (disorder)" EXACT [SNOMEDCT_2005_07_31:254633006] "SCLC" EXACT [CSP2005:2017-6589] "small cell carcinoma of lung" RELATED [] "small cell carcinoma of lung (disorder)" EXACT [SNOMEDCT_2005_07_31:254632001] "small cell neuroendocrine carcinoma of lung" EXACT [NCI2004_11_17:C4917] | ||
Comments: | OMIM mapping confirmed by DO. [SN]. |
Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | DOID:3905(lung carcinoma) |
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Children
NA
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
Human (Homo sapiens)
- 10462-106H3
- 10468-106H9
- 10502-107C7
- 10503-107C8
- 10504-107C9
- 10505-107D1
- 10506-107D2
- 10524-107F2
- 10525-107F3
- 10526-107F4
... further results Mouse (Mus musculus)
- 10462-106H3
- 10468-106H9
- 10502-107C7
- 10503-107C8
- 10504-107C9
- 10505-107D1
- 10506-107D2
- 10524-107F2
- 10525-107F3
- 10526-107F4
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:5409 (lung small cell carcinoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
P-value | FFCP | Short description |
---|---|---|
1.55e-98 | FFCP PHASE2:Hg19::chr6:125378873..125378876,+#_5a0cadd9f97072f65b901942816bde31 | p@chr6:125378873..125378876, + |
1.55e-98 | FFCP PHASE1:Hg19::chr6:125378873..125378876,+#_5a0cadd9f97072f65b901942816bde31 | p@chr6:125378873..125378876, + |
2.4e-66 | FFCP PHASE1:Hg19::chr8:40525350..40525354,-#_40c90676995a138ba0819dfe8db6fb93 | p@chr8:40525350..40525354, - |
2.4e-66 | FFCP PHASE2:Hg19::chr8:40525350..40525354,-#_40c90676995a138ba0819dfe8db6fb93 | p@chr8:40525350..40525354, - |
3.1e-50 | FFCP PHASE2:Hg19::chr6:45398505..45398508,+#_5be4114e7d0131f457d60e83d77a108d | p@chr6:45398505..45398508, + |
3.1e-50 | FFCP PHASE1:Hg19::chr15:85564362..85564385,+#_5be4114e7d0131f457d60e83d77a108d | p@chr15:85564362..85564385, + |
3.1e-50 | FFCP PHASE2:Hg19::chr17:58979826..58979836,+#_5be4114e7d0131f457d60e83d77a108d | p@chr17:58979826..58979836, + |
3.1e-50 | FFCP PHASE1:Hg19::chr5:134907210..134907215,-#_5be4114e7d0131f457d60e83d77a108d | p@chr5:134907210..134907215, - |
3.1e-50 | FFCP PHASE1:Hg19::chr3:150914241..150914244,+#_5be4114e7d0131f457d60e83d77a108d | p@chr3:150914241..150914244, + |
3.1e-50 | FFCP PHASE1:Hg19::chr1:225650299..225650317,-#_5be4114e7d0131f457d60e83d77a108d | p@chr1:225650299..225650317, - |
3.1e-50 | FFCP PHASE2:Hg19::chr7:26590581..26590596,-#_5be4114e7d0131f457d60e83d77a108d | p@chr7:26590581..26590596, - |
3.1e-50 | FFCP PHASE2:Hg19::chr20:13085064..13085070,+#_5be4114e7d0131f457d60e83d77a108d | p@chr20:13085064..13085070, + |
3.1e-50 | FFCP PHASE2:Hg19::chr13:25269076..25269105,-#_5be4114e7d0131f457d60e83d77a108d | p@chr13:25269076..25269105, - |
3.1e-50 | FFCP PHASE2:Hg19::chr12:54535470..54535475,+#_5be4114e7d0131f457d60e83d77a108d | p@chr12:54535470..54535475, + |
3.1e-50 | FFCP PHASE1:Hg19::chr10:129704201..129704232,-#_5be4114e7d0131f457d60e83d77a108d | p@chr10:129704201..129704232, - |
3.1e-50 | FFCP PHASE1:Hg19::chr7:79840127..79840130,+#_5be4114e7d0131f457d60e83d77a108d | p@chr7:79840127..79840130, + |
3.1e-50 | FFCP PHASE1:Hg19::chr16:13010590..13010593,+#_5be4114e7d0131f457d60e83d77a108d | p@chr16:13010590..13010593, + |
3.1e-50 | FFCP PHASE2:Hg19::chr15:89655929..89655934,+#_5be4114e7d0131f457d60e83d77a108d | p@chr15:89655929..89655934, + |
3.1e-50 | FFCP PHASE2:Hg19::chr11:1643561..1643566,+#_5be4114e7d0131f457d60e83d77a108d | p@chr11:1643561..1643566, + |
3.1e-50 | FFCP PHASE1:Hg19::chr8:98015616..98015617,-#_5be4114e7d0131f457d60e83d77a108d | p@chr8:98015616..98015617, - |
3.1e-50 | FFCP PHASE2:Hg19::chr8:98014001..98014041,-#_5be4114e7d0131f457d60e83d77a108d | p@chr8:98014001..98014041, - |
3.1e-50 | FFCP PHASE2:Hg19::chr5:134920622..134920655,+#_5be4114e7d0131f457d60e83d77a108d | p@chr5:134920622..134920655, + |
3.1e-50 | FFCP PHASE1:Hg19::chr7:95775942..95775990,-#_5be4114e7d0131f457d60e83d77a108d | p@chr7:95775942..95775990, - |
3.1e-50 | FFCP PHASE1:Hg19::chr5:28571958..28571968,-#_5be4114e7d0131f457d60e83d77a108d | p@chr5:28571958..28571968, - |
3.1e-50 | FFCP PHASE1:Hg19::chr3:102635409..102635414,-#_5be4114e7d0131f457d60e83d77a108d | p@chr3:102635409..102635414, - |
3.1e-50 | FFCP PHASE2:Hg19::chrX:135761931..135761934,-#_5be4114e7d0131f457d60e83d77a108d | p@chrX:135761931..135761934, - |
3.1e-50 | FFCP PHASE2:Hg19::chr7:95766136..95766143,-#_5be4114e7d0131f457d60e83d77a108d | p@chr7:95766136..95766143, - |
3.1e-50 | FFCP PHASE1:Hg19::chr1:81686906..81686911,+#_5be4114e7d0131f457d60e83d77a108d | p@chr1:81686906..81686911, + |
3.1e-50 | FFCP PHASE1:Hg19::chr2:103235035..103235044,+#_5be4114e7d0131f457d60e83d77a108d | p@chr2:103235035..103235044, + |
3.1e-50 | FFCP PHASE1:Hg19::chr8:116215298..116215305,+#_5be4114e7d0131f457d60e83d77a108d | p@chr8:116215298..116215305, + |
3.1e-50 | FFCP PHASE1:Hg19::chr7:44574327..44574332,-#_5be4114e7d0131f457d60e83d77a108d | p@chr7:44574327..44574332, - |
3.1e-50 | FFCP PHASE1:Hg19::chr11:73475071..73475076,-#_5be4114e7d0131f457d60e83d77a108d | p@chr11:73475071..73475076, - |
3.1e-50 | FFCP PHASE2:Hg19::chr5:28571974..28571978,-#_5be4114e7d0131f457d60e83d77a108d | p@chr5:28571974..28571978, - |
3.1e-50 | FFCP PHASE1:Hg19::chr13:92571088..92571098,-#_5be4114e7d0131f457d60e83d77a108d | p@chr13:92571088..92571098, - |
3.1e-50 | FFCP PHASE2:Hg19::chr3:102635473..102635480,-#_5be4114e7d0131f457d60e83d77a108d | p@chr3:102635473..102635480, - |
3.1e-50 | FFCP PHASE1:Hg19::chr10:121863383..121863387,-#_5be4114e7d0131f457d60e83d77a108d | p@chr10:121863383..121863387, - |
3.1e-50 | FFCP PHASE1:Hg19::chr7:120381610..120381618,+#_5be4114e7d0131f457d60e83d77a108d | p@chr7:120381610..120381618, + |
3.1e-50 | FFCP PHASE1:Hg19::chr2:135120480..135120481,+#_5be4114e7d0131f457d60e83d77a108d | p@chr2:135120480..135120481, + |
3.1e-50 | FFCP PHASE1:Hg19::chr18:6928495..6928520,-#_5be4114e7d0131f457d60e83d77a108d | p2@LOC400643 |
3.1e-50 | FFCP PHASE2:Hg19::chr2:194837773..194837784,-#_5be4114e7d0131f457d60e83d77a108d | p@chr2:194837773..194837784, - |
3.1e-50 | FFCP PHASE2:Hg19::chr2:103235120..103235130,+#_5be4114e7d0131f457d60e83d77a108d | p@chr2:103235120..103235130, + |
3.1e-50 | FFCP PHASE1:Hg19::chr8:97961177..97961185,-#_5be4114e7d0131f457d60e83d77a108d | p@chr8:97961177..97961185, - |
3.1e-50 | FFCP PHASE2:Hg19::chr13:92571252..92571265,-#_5be4114e7d0131f457d60e83d77a108d | p@chr13:92571252..92571265, - |
3.1e-50 | FFCP PHASE1:Hg19::chr10:29213480..29213487,-#_5be4114e7d0131f457d60e83d77a108d | p@chr10:29213480..29213487, - |
3.1e-50 | FFCP PHASE2:Hg19::chr10:129703430..129703445,+#_5be4114e7d0131f457d60e83d77a108d | p@chr10:129703430..129703445, + |
3.1e-50 | FFCP PHASE2:Hg19::chr4:3344577..3344588,+#_5be4114e7d0131f457d60e83d77a108d | p@chr4:3344577..3344588, + |
3.1e-50 | FFCP PHASE1:Hg19::chr2:192805223..192805230,+#_5be4114e7d0131f457d60e83d77a108d | p@chr2:192805223..192805230, + |
3.1e-50 | FFCP PHASE2:Hg19::chr8:54464033..54464036,-#_5be4114e7d0131f457d60e83d77a108d | p@chr8:54464033..54464036, - |
3.1e-50 | FFCP PHASE1:Hg19::chr18:39798771..39798780,-#_5be4114e7d0131f457d60e83d77a108d | p@chr18:39798771..39798780, - |
3.1e-50 | FFCP PHASE1:Hg19::chr13:76549637..76549662,+#_5be4114e7d0131f457d60e83d77a108d | p@chr13:76549637..76549662, + |
3.1e-50 | FFCP PHASE1:Hg19::chr8:72938203..72938230,+#_5be4114e7d0131f457d60e83d77a108d | p@chr8:72938203..72938230, + |
3.1e-50 | FFCP PHASE1:Hg19::chr3:86701902..86701920,-#_5be4114e7d0131f457d60e83d77a108d | p@chr3:86701902..86701920, - |
3.1e-50 | FFCP PHASE2:Hg19::chr6:17845348..17845358,-#_5be4114e7d0131f457d60e83d77a108d | p@chr6:17845348..17845358, - |
3.1e-50 | FFCP PHASE1:Hg19::chr14:60194446..60194457,-#_5be4114e7d0131f457d60e83d77a108d | p16@RTN1 |
3.1e-50 | FFCP PHASE2:Hg19::chr2:192805239..192805246,+#_5be4114e7d0131f457d60e83d77a108d | p@chr2:192805239..192805246, + |
3.1e-50 | FFCP PHASE2:Hg19::chr18:39798771..39798780,-#_5be4114e7d0131f457d60e83d77a108d | p@chr18:39798771..39798780, - |
3.1e-50 | FFCP PHASE1:Hg19::chr6:125378772..125378777,+#_5be4114e7d0131f457d60e83d77a108d | p@chr6:125378772..125378777, + |
3.1e-50 | FFCP PHASE1:Hg19::chr1:33705218..33705225,-#_5be4114e7d0131f457d60e83d77a108d | p@chr1:33705218..33705225, - |
3.1e-50 | FFCP PHASE2:Hg19::chr13:76554315..76554319,+#_5be4114e7d0131f457d60e83d77a108d | p@chr13:76554315..76554319, + |
3.1e-50 | FFCP PHASE2:Hg19::chr12:58158560..58158567,-#_5be4114e7d0131f457d60e83d77a108d | p@chr12:58158560..58158567, - |
3.1e-50 | FFCP PHASE1:Hg19::chr2:97626442..97626445,-#_5be4114e7d0131f457d60e83d77a108d | p@chr2:97626442..97626445, - |
3.1e-50 | FFCP PHASE1:Hg19::chr2:23850233..23850248,+#_5be4114e7d0131f457d60e83d77a108d | p@chr2:23850233..23850248, + |
3.1e-50 | FFCP PHASE1:Hg19::chr12:79756320..79756329,-#_5be4114e7d0131f457d60e83d77a108d | p@chr12:79756320..79756329, - |
3.1e-50 | FFCP PHASE2:Hg19::chr3:95401565..95401581,-#_5be4114e7d0131f457d60e83d77a108d | p2@ENST00000463799 |
3.1e-50 | FFCP PHASE2:Hg19::chr2:135169581..135169587,+#_5be4114e7d0131f457d60e83d77a108d | p@chr2:135169581..135169587, + |
3.1e-50 | FFCP PHASE2:Hg19::chr18:6928495..6928520,-#_5be4114e7d0131f457d60e83d77a108d | p2@LOC400643 |
3.1e-50 | FFCP PHASE2:Hg19::chr14:60194459..60194462,-#_5be4114e7d0131f457d60e83d77a108d | p43@RTN1 |
3.1e-50 | FFCP PHASE1:Hg19::chr6:154729003..154729006,-#_5be4114e7d0131f457d60e83d77a108d | p@chr6:154729003..154729006, - |
3.1e-50 | FFCP PHASE2:Hg19::chr8:98108427..98108430,-#_5be4114e7d0131f457d60e83d77a108d | p@chr8:98108427..98108430, - |
3.1e-50 | FFCP PHASE2:Hg19::chr8:39970826..39970832,+#_5be4114e7d0131f457d60e83d77a108d | p@chr8:39970826..39970832, + |
3.1e-50 | FFCP PHASE1:Hg19::chr12:27925654..27925663,-#_5be4114e7d0131f457d60e83d77a108d | p@chr12:27925654..27925663, - |
3.1e-50 | FFCP PHASE2:Hg19::chr7:84390545..84390550,+#_5be4114e7d0131f457d60e83d77a108d | p@chr7:84390545..84390550, + |
3.1e-50 | FFCP PHASE2:Hg19::chr2:97626185..97626188,-#_5be4114e7d0131f457d60e83d77a108d | p@chr2:97626185..97626188, - |
3.1e-50 | FFCP PHASE2:Hg19::chr14:25326297..25326305,-#_5be4114e7d0131f457d60e83d77a108d | p@chr14:25326297..25326305, - |
3.1e-50 | FFCP PHASE2:Hg19::chr12:84664736..84664743,+#_5be4114e7d0131f457d60e83d77a108d | p2@ENST00000547882 |
3.1e-50 | FFCP PHASE1:Hg19::chr10:65821760..65821780,+#_5be4114e7d0131f457d60e83d77a108d | p@chr10:65821760..65821780, + |
3.1e-50 | FFCP PHASE2:Hg19::chr10:29212181..29212188,+#_5be4114e7d0131f457d60e83d77a108d | p@chr10:29212181..29212188, + |
3.1e-50 | FFCP PHASE1:Hg19::chr5:6961030..6961034,+#_5be4114e7d0131f457d60e83d77a108d | p@chr5:6961030..6961034, + |
3.1e-50 | FFCP PHASE1:Hg19::chr3:78334430..78334433,-#_5be4114e7d0131f457d60e83d77a108d | p@chr3:78334430..78334433, - |
3.1e-50 | FFCP PHASE1:Hg19::chr2:202413051..202413061,-#_5be4114e7d0131f457d60e83d77a108d | p@chr2:202413051..202413061, - |
3.1e-50 | FFCP PHASE2:Hg19::chr8:57525935..57525942,+#_5be4114e7d0131f457d60e83d77a108d | p@chr8:57525935..57525942, + |
3.1e-50 | FFCP PHASE2:Hg19::chr19:46531064..46531073,+#_5be4114e7d0131f457d60e83d77a108d | p@chr19:46531064..46531073, + |
3.1e-50 | FFCP PHASE2:Hg19::chr14:57021818..57021822,+#_5be4114e7d0131f457d60e83d77a108d | p@chr14:57021818..57021822, + |
3.1e-50 | FFCP PHASE2:Hg19::chr10:65730100..65730104,-#_5be4114e7d0131f457d60e83d77a108d | p@chr10:65730100..65730104, - |
3.1e-50 | FFCP PHASE1:Hg19::chr10:129704562..129704569,+#_5be4114e7d0131f457d60e83d77a108d | p@chr10:129704562..129704569, + |
3.1e-50 | FFCP PHASE1:Hg19::chr4:41749788..41749795,-#_5be4114e7d0131f457d60e83d77a108d | p10@PHOX2B |
3.1e-50 | FFCP PHASE1:Hg19::chr2:234862409..234862414,+#_5be4114e7d0131f457d60e83d77a108d | p14@TRPM8 |
3.1e-50 | FFCP PHASE2:Hg19::chr6:23637684..23637686,-#_5be4114e7d0131f457d60e83d77a108d | p@chr6:23637684..23637686, - |
3.1e-50 | FFCP PHASE2:Hg19::chr4:178653531..178653568,+#_5be4114e7d0131f457d60e83d77a108d | p@chr4:178653531..178653568, + |
3.1e-50 | FFCP PHASE2:Hg19::chr3:86701921..86701925,-#_5be4114e7d0131f457d60e83d77a108d | p@chr3:86701921..86701925, - |
3.1e-50 | FFCP PHASE2:Hg19::chr2:220594691..220594695,+#_5be4114e7d0131f457d60e83d77a108d | p4@ENST00000442416 |
3.1e-50 | FFCP PHASE2:Hg19::chr14:60194043..60194066,-#_5be4114e7d0131f457d60e83d77a108d | p18@RTN1 |
3.1e-50 | FFCP PHASE1:Hg19::chr8:98066259..98066270,-#_5be4114e7d0131f457d60e83d77a108d | p@chr8:98066259..98066270, - |
3.1e-50 | FFCP PHASE2:Hg19::chr8:98051049..98051058,-#_5be4114e7d0131f457d60e83d77a108d | p@chr8:98051049..98051058, - |
3.1e-50 | FFCP PHASE2:Hg19::chr21:26144899..26144920,-#_5be4114e7d0131f457d60e83d77a108d | p@chr21:26144899..26144920, - |
3.1e-50 | FFCP PHASE1:Hg19::chr7:26482715..26482738,-#_5be4114e7d0131f457d60e83d77a108d | p@chr7:26482715..26482738, - |
3.1e-50 | FFCP PHASE1:Hg19::chr5:33619040..33619056,-#_5be4114e7d0131f457d60e83d77a108d | p@chr5:33619040..33619056, - |
3.1e-50 | FFCP PHASE1:Hg19::chr3:115898365..115898379,+#_5be4114e7d0131f457d60e83d77a108d | p@chr3:115898365..115898379, + |
3.1e-50 | FFCP PHASE1:Hg19::chr1:181360250..181360259,+#_5be4114e7d0131f457d60e83d77a108d | p@chr1:181360250..181360259, + |
3.1e-50 | FFCP PHASE1:Hg19::chr17:70939741..70939790,-#_5be4114e7d0131f457d60e83d77a108d | p@chr17:70939741..70939790, - |