FFCP PHASE1:Hg19::chr12:52887034..52887049,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3853 | |EntrezGene=3853 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6443 | |HGNC=6443 | ||
|TSSclassifier=strong | |||
|UniProt=P02538 | |UniProt=P02538 | ||
|association_with_transcript=0bp_to_ENST00000330722_5end | |association_with_transcript=0bp_to_ENST00000330722_5end | ||
|cluster_id=chr12:52887034..52887049,- | |||
|coexpression_cluster_id=C594 | |||
|description=CAGE_peak_1_at_KRT6A_5end | |description=CAGE_peak_1_at_KRT6A_5end | ||
|id=chr12:52887034..52887049,- | |id=chr12:52887034..52887049,- | ||
|ontology_enrichment_celltype=CL:0002076!7.44e-21!43;CL:0000066!3.50e-15!254;CL:0000223!9.89e-14!59;CL:0002251!5.72e-11!21;CL:0002368!5.52e-10!13;CL:0002159!1.36e-08!13;CL:0000076!3.98e-07!62 | |ontology_enrichment_celltype=CL:0002076!7.44e-21!43;CL:0000066!3.50e-15!254;CL:0000223!9.89e-14!59;CL:0002251!5.72e-11!21;CL:0002368!5.52e-10!13;CL:0002159!1.36e-08!13;CL:0000076!3.98e-07!62 | ||
|ontology_enrichment_celltype_v019=CL:0002076;7.03e-18;42!CL:0002368;3.89e-13;13!CL:0002251;7.71e-13;20!CL:0002159;2.11e-10;14!CL:0002202;3.51e-08;9!CL:0002632;3.51e-08;9!CL:0000622;4.76e-08;5!CL:0000349;8.50e-08;19!CL:0000244;6.28e-07;4!CL:0000731;6.28e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,7.72e-24,42;CL:0000223,1.00e-16,58;CL:0000066,1.42e-16,253;CL:0002368,3.89e-13,13;CL:0002251,8.13e-13,20;CL:0002159,2.12e-10,14;CL:0002202,3.49e-08,9;CL:0002632,3.49e-08,9;CL:0000622,4.76e-08,5;CL:0000349,8.50e-08,19;CL:0000244,6.29e-07,4;CL:0000731,6.29e-07,4;CL:0002077,9.27e-07,34 | |||
|ontology_enrichment_development_v019=CL:0000223;1.57e-09;58 | |||
|ontology_enrichment_disease=DOID:1749!6.52e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;4.73e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,4.83e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.86e-17!169;UBERON:0000925!2.86e-17!169;UBERON:0006595!2.86e-17!169;UBERON:0001004!2.18e-14!72;UBERON:0000077!6.29e-11!130;UBERON:0001007!7.84e-11!155;UBERON:0001555!7.84e-11!155;UBERON:0007026!7.84e-11!155;UBERON:0000065!1.19e-10!53;UBERON:0005631!1.36e-10!14;UBERON:0000158!1.36e-10!14;UBERON:0000161!1.82e-10!35;UBERON:0004923!5.28e-10!57;UBERON:0003102!9.74e-10!95;UBERON:0005181!4.51e-09!35;UBERON:0000922!1.14e-08!612;UBERON:0000062!1.15e-08!511;UBERON:0005178!1.31e-08!34;UBERON:0002224!1.31e-08!34;UBERON:0002050!1.73e-08!605;UBERON:0005423!1.73e-08!605;UBERON:0000064!2.03e-08!219;UBERON:0003124!2.90e-08!7;UBERON:0004921!3.72e-08!129;UBERON:0004185!3.72e-08!129;UBERON:0005911!3.76e-08!82;UBERON:0000923!4.09e-08!604;UBERON:0005291!4.09e-08!604;UBERON:0006598!4.09e-08!604;UBERON:0002532!4.09e-08!604;UBERON:0007196!7.92e-08!14;UBERON:0001558!7.92e-08!14;UBERON:0000166!1.03e-07!21;UBERON:0000467!1.12e-07!625;UBERON:0000480!1.36e-07!626;UBERON:0000468!1.40e-07!659;UBERON:0005157!2.43e-07!51;UBERON:0005153!2.94e-07!37;UBERON:0000165!3.01e-07!28;UBERON:0000930!3.01e-07!28;UBERON:0000072!5.61e-07!46;UBERON:0000344!7.59e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;5.69e-09;10!UBERON:0000158;5.69e-09;10!UBERON:0000161;1.68e-08;19!UBERON:0000166;1.68e-08;19!UBERON:0000165;2.80e-08;28!UBERON:0000365;5.66e-08;5!UBERON:0000478;5.83e-08;24!UBERON:0000077;7.67e-08;27!UBERON:0000974;1.17e-07;6!UBERON:0000344;1.17e-07;20!UBERON:0000486;2.25e-07;12!UBERON:0004923;4.58e-07;55!UBERON:0005911;5.58e-07;36!UBERON:0007196;5.65e-07;15!UBERON:0001558;5.65e-07;15!UBERON:0001987;8.07e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.86e-16,160;UBERON:0000925,1.86e-16,160;UBERON:0006595,1.86e-16,160;UBERON:0001004,1.61e-14,74;UBERON:0003102,5.80e-14,99;UBERON:0005631,6.09e-14,14;UBERON:0000158,6.09e-14,14;UBERON:0000161,3.79e-13,36;UBERON:0004923,9.89e-11,66;UBERON:0003124,1.77e-10,7;UBERON:0000166,5.64e-10,22;UBERON:0001007,1.07e-09,145;UBERON:0001555,1.07e-09,145;UBERON:0007026,1.07e-09,145;UBERON:0000065,1.88e-09,54;UBERON:0000153,1.40e-08,62;UBERON:0007811,1.40e-08,62;UBERON:0000365,5.66e-08,5;UBERON:0000478,5.83e-08,24;UBERON:0000165,7.57e-08,29;UBERON:0000930,7.57e-08,29;UBERON:0000344,1.23e-07,20;UBERON:0004921,1.86e-07,118;UBERON:0000974,2.05e-07,10;UBERON:0005181,2.51e-07,35;UBERON:0005911,3.76e-07,82;UBERON:0000077,4.79e-07,29;UBERON:0007196,5.63e-07,15;UBERON:0001558,5.63e-07,15;UBERON:0000033,8.05e-07,56;UBERON:0001987,8.07e-07,4;UBERON:0004340,8.07e-07,4;UBERON:0005178,8.26e-07,34;UBERON:0002224,8.26e-07,34 | |||
|phase1_expression=0,0,0,0,0,0,0,0,11.2309820125931,29.4880723801811,55.8240934377942,2157.54543252971,2170.53846384194,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,25.8542925937847,7756.23744970423,7643.70260083565,4640.78258160335,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,52.0643572264697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.63508860674636,0,22.8718389042239,0,0,2.72287835648691,16.5688530504606,7854.9350061638,9024.52255293023,0,0,0,0,0,0,0,2.58070378531837,0,0.56530794192401,0,0,0.208994966536811,0,0,0,0,0,14.6437234528902,0,0,0,0,0.225222960966644,0,0,1.46561395144326,0,0,10453.6105239087,0,0,0.132409180813219,0,29.4374757224636,25.2304920064038,0,0.74000264525148,0,0,0.163461903113459,0,0,0,0,189.967116574302,1.94283284717341,0.117434498643765,2.42809416552197,1.96631129383148,0,0,0,0,0,0,0,0,0.375355559615893,0,0,0,0.751190294532984,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5777.53320531676,5392.46355020139,3992.31996781493,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,2.09080345523293,0,21392.1963809931,7484.83274942489,5108.1786751522,3311.98127176576,0,0,0,0,0,0,0,0,0,1.71697232418975,0,0,0,7408.72223831485,3535.3518700732,3339.37064044717,3964.66624153239,3169.65373343327,6260.6391507679,0.492663237895943,0,7.46381215946779,8.2148373447668,2.90357596880674,14.2235283214459,0,0,316.484025142005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699810938274399,0,0,0,0,0,0,0,0,0,0,0,0,0,3.55732473911449,0,0,0,0,0,0,0,0,25.5086965740435,0,0,0,0,0,0,0,152.105414799982,0,14.1964259777111,0,0,0,0,0,0,14001.4625251027,2661.30267777285,4096.48130373718,0,0,0,0,0,0.321707842287215,1.48418066444991,0,0.177561725313127,0,0,0,8.7018803705968,4309.08455328789,8933.69754656066,0,0,19.0130401691165,0,0.0770153371044148,0,0,0.316654886678627,0,0.170093705276516,3.02282282542995,0,0,0,0,0,0,0,0,0,0,0,16.7956848985787,0,0,5479.06749802148,6521.40438823838,0,0,0,0,0,0,0,4.68746450788555,0,6260.33145421241,2792.71386888236,1906.53392466909,3923.10105713994,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,2.23843564456804,0,0,0,0,0,0,0,0,6.78048699721457,0,0,0,0.578775534266688,0,0,32.221643802374,0,0,0,0,0,0.633322905892992,0,0,0,5764.1856628218,5096.30820089859,4258.72641792633,15.0630081242847,4701.5491749425,3994.4586880794,6513.54552530023,1265.54621174014,0,0,0,0,0,0,0,0,0,12.5122381184237,433.476142070445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9579.38370561507,36.2296910615819,12802.7652241981,0,0,0,0,0.844501632511974,3.78571177677032,0,0,0.306806047506464,0,0,0.269605053441981,0.895105873378046,0,4.53759665929895,0,0,0,0,0,0,0,0,1195.51396768746,0,5.2005289988946,0,0,0,0,0,0,0,0,0,0,3997.97586718895,3512.47149966432,0,0,0,0,4312.57667841582,179.073295100641,2163.58815585964,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.530745387020035,0,0,0,0,0.134802265961354,1.60515529459758,0,0,17.6098157038881,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.277349346026277,0.694238953340524,1040.58126814328,95.7651272384428,0.17472666824203,0,0,0,0,4284.19883632646,0,11.0730562982461,0,0,0.189932387867636,11.928634346823,118.875530433024,2.13452994739353,65.3377423333566,0,0,0,0,0,278.118960847819,0,0,0,0,0,0,0,0,0,0,0,0,2.39614800598789,0,0,4.43410918412393,0,0,0,0,0,0,0,0,0,0,0,0,8.32403398740552,5.41661368190565,0,1966.3181387069,0,0.0524545881349981,0,0,0,0.714695326373367,0,1.27134268827375,0,0,0,0,0,0,0,0,0,0,0,0,8.45778026780006,5.33937062838473,0.471612915298998,0.414239055347196,0,0,0,940.276672695478,0,0,0,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0,21.4966301694823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0.380805212168795,0.813741466409323,0,0,0,0,0,0,0,0,0,1.07220795687463,0,0,0,0,0,83.6851921806235,0.219284049578707,0,0.192914038270915,0,0,0,0,0.138258436151731,0.584580926518165,0.265729680626726,1.63565394255844,0,0,19.8633395957109,0,0,0,0,0,6388.29711754703,4005.55547735231,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0.968853873791107,0,262.25070383474,483.321956555692,840.836695623376,2.19498765685643,0,0,0,0.0752103283492573,0,0,0,0,2.80926563812386,0,0,0,0,0,0,88.8218009316837,0,7.53798323073612,0,0,0,0.455324382702595,284.823310592233,0,0,0.0679697329768317,0.328863867814245,0,0.333694205676207,1.80534113556182,0,0.280272163313789,0,0,0,0.142953088353313,0,0,0,0,697.904040901108,2708.7900760497,1634.82910019033,10.3254566116867,0,0,0,1.3746412112643,0,0,0.111855431797792,0.490751168076215,0,1.94228651156368,0.102662806856247,0,148.627563876097,0,0,2.14056163399623,1.01651473835064,0.659643100472575,0,0,0.218559560503957,0,0,0.235676547101626,0.196308467114945,0,1.2679671827502,0,0,0.515663103788617,0,744.391370046987,134.100051251963,0,0.730336388246517,0,0.430018749454354,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0.530450887527676,0,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| ||
|short_description=p1@KRT6A | |short_description=p1@KRT6A | ||
}} | }} |
Latest revision as of 22:54, 18 September 2015
Short description: | p1@KRT6A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KRT6A_5end |
Coexpression cluster: | C594_Keratinocyte_Placental_amniotic_Esophageal_tongue_Corneal_Prostate |
Association with transcript: | 0bp_to_ENST00000330722_5end |
EntrezGene: | KRT6A |
HGNC: | 6443 |
UniProt: | P02538 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 7.72e-24 | 42 |
endodermal cell | 1.00e-16 | 58 |
epithelial cell | 1.42e-16 | 253 |
respiratory epithelial cell | 3.89e-13 | 13 |
epithelial cell of alimentary canal | 8.13e-13 | 20 |
general ecto-epithelial cell | 2.12e-10 | 14 |
epithelial cell of tracheobronchial tree | 3.49e-08 | 9 |
epithelial cell of lower respiratory tract | 3.49e-08 | 9 |
acinar cell | 4.76e-08 | 5 |
extraembryonic cell | 8.50e-08 | 19 |
transitional epithelial cell | 6.29e-07 | 4 |
urothelial cell | 6.29e-07 | 4 |
ecto-epithelial cell | 9.27e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.86e-16 | 160 |
endoderm | 1.86e-16 | 160 |
presumptive endoderm | 1.86e-16 | 160 |
respiratory system | 1.61e-14 | 74 |
surface structure | 5.80e-14 | 99 |
extraembryonic membrane | 6.09e-14 | 14 |
membranous layer | 6.09e-14 | 14 |
orifice | 3.79e-13 | 36 |
organ component layer | 9.89e-11 | 66 |
chorion | 1.77e-10 | 7 |
oral opening | 5.64e-10 | 22 |
digestive system | 1.07e-09 | 145 |
digestive tract | 1.07e-09 | 145 |
primitive gut | 1.07e-09 | 145 |
respiratory tract | 1.88e-09 | 54 |
anterior region of body | 1.40e-08 | 62 |
craniocervical region | 1.40e-08 | 62 |
urothelium | 5.66e-08 | 5 |
extraembryonic structure | 5.83e-08 | 24 |
mouth | 7.57e-08 | 29 |
stomodeum | 7.57e-08 | 29 |
mucosa | 1.23e-07 | 20 |
subdivision of digestive tract | 1.86e-07 | 118 |
neck | 2.05e-07 | 10 |
thoracic segment organ | 2.51e-07 | 35 |
endo-epithelium | 3.76e-07 | 82 |
mixed endoderm/mesoderm-derived structure | 4.79e-07 | 29 |
tracheobronchial tree | 5.63e-07 | 15 |
lower respiratory tract | 5.63e-07 | 15 |
head | 8.05e-07 | 56 |
placenta | 8.07e-07 | 4 |
allantois | 8.07e-07 | 4 |
thoracic cavity element | 8.26e-07 | 34 |
thoracic cavity | 8.26e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 4.83e-10 | 14 |