FFCP PHASE1:Hg19::chr12:53200731..53200762,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:53200731..53200762,- | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_at_chr12:53200731..53200762,- | |description=CAGE_peak_at_chr12:53200731..53200762,- | ||
|id=chr12:53200731..53200762,- | |id=chr12:53200731..53200762,- | ||
|ontology_enrichment_celltype=CL:0002368!2.83e-10!13 | |ontology_enrichment_celltype=CL:0002368!2.83e-10!13 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;3.16e-18;1!UBERON:0008814;9.46e-10;2!UBERON:0010056;9.46e-10;2 | |||
|ontology_enrichment_disease=DOID:3151!4.69e-07!1;DOID:3149!4.69e-07!1;DOID:178!4.97e-07!1;DOID:326!4.97e-07!1;DOID:3978!4.97e-07!1;DOID:3394!4.97e-07!1;DOID:5844!4.97e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:3151;8.72e-18;1!DOID:3149;8.72e-18;1!DOID:178;1.44e-17;1!DOID:326;1.44e-17;1!DOID:3978;1.44e-17;1!DOID:3394;1.44e-17;1!DOID:5844;1.44e-17;1!DOID:3451;1.44e-09;2!DOID:4159;1.44e-09;2!DOID:0060122;1.44e-09;2!DOID:114;1.86e-09;2!DOID:3910;1.86e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,1.03e-17,1;DOID:3149,1.03e-17,1;DOID:178,1.22e-17,1;DOID:326,1.22e-17,1;DOID:3978,1.22e-17,1;DOID:3394,1.22e-17,1;DOID:5844,1.22e-17,1;DOID:3451,1.57e-09,2;DOID:4159,1.57e-09,2;DOID:0060122,1.57e-09,2;DOID:114,1.71e-09,2;DOID:3910,2.02e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0000341!4.43e-12!2;UBERON:0003127!8.58e-12!2;UBERON:0000065!1.67e-10!53;UBERON:0001004!2.88e-10!72;UBERON:0007196!1.17e-09!14;UBERON:0001558!1.17e-09!14;UBERON:0001041!1.81e-09!98;UBERON:0001723!9.35e-09!3;UBERON:0001033!9.35e-09!3;UBERON:0010056!9.35e-09!3;UBERON:0000078!1.08e-07!18;UBERON:0003126!1.58e-07!7;UBERON:0001005!1.58e-07!7;UBERON:0004119!1.87e-07!169;UBERON:0000925!1.87e-07!169;UBERON:0006595!1.87e-07!169;UBERON:0000077!2.05e-07!130;UBERON:0002372!3.73e-07!1;UBERON:0001961!3.73e-07!1;UBERON:0001744!3.73e-07!1;UBERON:0001735!3.73e-07!1;UBERON:0005178!3.90e-07!34;UBERON:0002224!3.90e-07!34;UBERON:0002171!6.60e-07!1;UBERON:0006518!6.60e-07!1;UBERON:0008949!6.60e-07!1;UBERON:0000101!6.60e-07!1;UBERON:0002167!6.60e-07!1;UBERON:0005181!6.63e-07!35;UBERON:0000997!7.39e-07!1;UBERON:0005056!7.39e-07!1;UBERON:0000989!9.79e-07!1;UBERON:0008811!9.79e-07!1;UBERON:0006258!9.79e-07!1;UBERON:0005876!9.79e-07!1;UBERON:0004874!9.79e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;2.63e-23;3!UBERON:0001033;2.63e-23;3!UBERON:0002372;5.26e-18;1!UBERON:0001961;5.26e-18;1!UBERON:0001744;5.26e-18;1!UBERON:0001042;5.26e-18;1!UBERON:0001735;5.26e-18;1!UBERON:0000002;5.37e-12;6!UBERON:0001560;5.37e-12;6!UBERON:0000341;7.98e-10;2!UBERON:0000165;8.03e-10;28!UBERON:0006562;1.12e-09;2!UBERON:0004903;1.86e-09;2!UBERON:0002173;1.86e-09;2!UBERON:0002186;1.86e-09;2!UBERON:0001043;6.14e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,2.63e-23,3;UBERON:0001033,2.63e-23,3;UBERON:0010056,2.63e-23,3;UBERON:0002372,5.26e-18,1;UBERON:0001961,5.26e-18,1;UBERON:0001744,5.26e-18,1;UBERON:0001735,5.26e-18,1;UBERON:0001042,1.06e-15,10;UBERON:0009145,1.06e-15,10;UBERON:0006562,2.46e-14,11;UBERON:0000166,2.04e-12,22;UBERON:0000002,5.08e-12,6;UBERON:0001560,5.08e-12,6;UBERON:0000341,7.98e-10,2;UBERON:0000165,1.71e-09,29;UBERON:0000930,1.71e-09,29;UBERON:0004903,2.02e-09,2;UBERON:0002173,2.02e-09,2;UBERON:0002186,2.02e-09,2;UBERON:0001557,1.50e-08,19;UBERON:0000161,1.07e-07,36;UBERON:0001043,6.14e-07,3;UBERON:0009143,6.14e-07,3;UBERON:0000153,9.30e-07,62;UBERON:0007811,9.30e-07,62 | |||
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|short_description=p@chr12:53200731..53200762,- | |short_description=p@chr12:53200731..53200762,- | ||
}} | }} |
Latest revision as of 09:40, 24 July 2015
Short description: | p@chr12:53200731..53200762, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:53200731..53200762, - |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tongue | 2.63e-23 | 3 |
gustatory system | 2.63e-23 | 3 |
future tongue | 2.63e-23 | 3 |
tonsil | 5.26e-18 | 1 |
mucosa-associated lymphoid tissue | 5.26e-18 | 1 |
lymphoid tissue | 5.26e-18 | 1 |
tonsillar ring | 5.26e-18 | 1 |
chordate pharynx | 1.06e-15 | 10 |
pharyngeal region of foregut | 1.06e-15 | 10 |
pharynx | 2.46e-14 | 11 |
oral opening | 2.04e-12 | 22 |
uterine cervix | 5.08e-12 | 6 |
neck of organ | 5.08e-12 | 6 |
throat | 7.98e-10 | 2 |
mouth | 1.71e-09 | 29 |
stomodeum | 1.71e-09 | 29 |
bronchoalveolar duct junction | 2.02e-09 | 2 |
alveolar duct | 2.02e-09 | 2 |
bronchiole | 2.02e-09 | 2 |
upper respiratory tract | 1.50e-08 | 19 |
orifice | 1.07e-07 | 36 |
esophagus | 6.14e-07 | 3 |
esophageal region | 6.14e-07 | 3 |
anterior region of body | 9.30e-07 | 62 |
craniocervical region | 9.30e-07 | 62 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 1.03e-17 | 1 |
keratoacanthoma | 1.03e-17 | 1 |
vascular disease | 1.22e-17 | 1 |
ischemia | 1.22e-17 | 1 |
extrinsic cardiomyopathy | 1.22e-17 | 1 |
myocardial ischemia | 1.22e-17 | 1 |
myocardial infarction | 1.22e-17 | 1 |
skin carcinoma | 1.57e-09 | 2 |
skin cancer | 1.57e-09 | 2 |
integumentary system cancer | 1.57e-09 | 2 |
heart disease | 1.71e-09 | 2 |
lung adenocarcinoma | 2.02e-09 | 2 |