FFCP PHASE1:Mm9::chr19:4594312..4594332,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18563 | |EntrezGene=18563 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=652 | |||
|TSSclassifier=NA | |||
|UniProt=G5E8R3,Q3UFS6,Q8BP54 | |UniProt=G5E8R3,Q3UFS6,Q8BP54 | ||
|association_with_transcript=0bp_to_ENSMUST00000113825,NM_008797,uc008gag.2_5end | |association_with_transcript=0bp_to_ENSMUST00000113825,NM_008797,uc008gag.2_5end | ||
|cluster_id=chr19:4594312..4594332,+ | |||
|description=CAGE_peak_5_at_Pcx_5end | |description=CAGE_peak_5_at_Pcx_5end | ||
|id=chr19:4594312..4594332,+ | |id=chr19:4594312..4594332,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!3.29e-14!49;UBERON:0005173!3.29e-14!49;UBERON:0002417!3.29e-14!49;UBERON:0000916!3.29e-14!49;UBERON:0002365!1.08e-12!25;UBERON:0002330!1.08e-12!25;UBERON:0009854!1.95e-11!23;UBERON:0009856!1.95e-11!23;UBERON:0002107!3.76e-11!22;UBERON:0007499!3.76e-11!22;UBERON:0006925!3.76e-11!22;UBERON:0009497!3.76e-11!22;UBERON:0000015!3.76e-11!22;UBERON:0002423!3.76e-11!22;UBERON:0006235!3.76e-11!22;UBERON:0008835!3.76e-11!22;UBERON:0003894!3.76e-11!22;UBERON:0004161!3.76e-11!22;UBERON:0008836!3.76e-11!22;UBERON:0009569!1.36e-09!66;UBERON:0005177!2.56e-07!85 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,5.88e-15,49;UBERON:0005173,5.88e-15,49;UBERON:0002417,5.88e-15,49;UBERON:0000916,5.88e-15,49;UBERON:0002365,3.43e-13,25;UBERON:0002330,3.43e-13,25;UBERON:0009854,1.44e-12,23;UBERON:0009856,1.44e-12,23;UBERON:0002107,3.62e-12,22;UBERON:0007499,3.62e-12,22;UBERON:0006925,3.62e-12,22;UBERON:0009497,3.62e-12,22;UBERON:0000015,3.62e-12,22;UBERON:0002423,3.62e-12,22;UBERON:0006235,3.62e-12,22;UBERON:0008835,3.62e-12,22;UBERON:0003894,3.62e-12,22;UBERON:0004161,3.62e-12,22;UBERON:0008836,3.62e-12,22;UBERON:0003104,6.72e-10,61;UBERON:0009142,6.72e-10,61;UBERON:0009569,5.26e-09,66;UBERON:0005177,2.51e-07,79;UBERON:0005256,7.06e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87095238332354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,8.06693078607652,0.659058548203415,0.194429899074283,0.55994568650145,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0.299600110518405,1.92109152660777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,0,6.88339101585109,10.1995700056163,2.69851595818909,5.84798775702902,6.72040330646003,4.91555470461132,0,0,0,0,0,0,0,0,0,0,8.79215873836762,0.258937883647172,8.75808620482466,0,0,3.45923245884088,1.50722640552623,1.99900802130698,16.2109902815281,26.6970565153124,22.1237016087465,0,0.161766849947409,0,0,1.86391761218122,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0.101839363850316,1.36847667671102,0.252722758433675,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0.268273401399619,0,0.16455984991348,0,0,0,5.26920276698522,0.268412837520744,0,0,0,0,0,0,0.128867461322093,0.605050573870028,1.33426826306922,2.09248188723815,0.474529061544512,0.658795818896044,0.754005626400808,0.397912944082302,0.19496408711912,0,0.216138049874694,0.199141273254367,0,1.14248512609729,3.38123207019241,7.94240178596726,17.0678188707511,28.2647354157984,59.5688179710504,22.8795729368383,20.8808308029028,30.8492909804501,2.96452627087149,0.166845105716094,0.393117990226406,0.449724224769707,2.23146133527353,14.7118067448974,35.3929933976174,64.4439347889816,78.1491793055671,39.8114049122718,23.0029130443767,49.1226050922424,30.8917296383415,2.52578877947112,4.4849353380478,8.68398338454061,0,0,0,0.169745085775188,0,0,0.952174563544055,0.195133647857799,0,0,0,0.327726629431476,1.55416483679306,0.433947175744535,0,0,23.6046851049137,9.3818493743609,0,0,0,6.81671503451807,3.15508219416257,3.51394869866975,1.29254038639679,0.238968797952552,0,0,0.404810701674894,0,0,0,6.38730383437209,2.84904965867608,0,0.329940245945071,1.32745138339963,0,0.302323556964751,0,0.295301892880773,0,1.29214146584111,0,0.356497378384721,0,1.05418608574999,0,0,0,0,0,0,0,0,0,1.17335854031855,7.62595455109753,0.441056796109924,0.8244312647074,0.645857706783622,5.1869115438214,1.07435109602823,0.492422699235184,0,0.18542530201051,0,0.206386867963223,0.370389054739423,0,0,0.457556346413045,0,0,0,0,0,0,0.324016022465404,0,2.40198820120795,1.48350781023303,5.53778153359751,1.57053565190418,0.259229946583586,0.621339313086926,0,0,0,0,0.129159823477731,0,0,1.3020438484395,0.104859344425711,0.483168241652012,0.288030006257865,1.89606672376907,0,0,0,0,0.198681354781265,0,0,0,0,0.100826185136841,0,0.192423683280659,0,0,0,0,0.167884616364078,0.965947970160952,3.19060208267009,0.549454872801795,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0.972426868273176,1.67690530102386,5.69914876195044,6.22290837844523,4.73880631649457,4.1719497246936,4.80124702351215,7.35089969681695,5.47016390019621,5.99305647807247,6.78666615491614,6.66251439885114,8.57328644309533,5.44656331940821,8.48800570040302,5.35711671044299,4.41596760403192,5.48590803816665,6.74408063405482,6.19934093863034,6.54058874845478,5.64656282491984,6.51532480765909,5.12198324043763,6.31367307450823,6.92600980613895,4.48913817326191,5.21994079746366,6.00877342490937,4.50154147486658,6.04253680625267,4.24394544158511,0.249810577937946,10.7608539884888,13.3220053509945,1.14772999241306,1.10295709559758,0.927471342481686 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87095238332354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,8.06693078607652,0.659058548203415,0.194429899074283,0.55994568650145,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0.299600110518405,1.92109152660777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,0,6.88339101585109,10.1995700056163,2.69851595818909,5.84798775702902,6.72040330646003,4.91555470461132,0,0,0,0,0,0,0,0,0,0,8.79215873836762,0.258937883647172,8.75808620482466,0,0,3.45923245884088,1.50722640552623,1.99900802130698,16.2109902815281,26.6970565153124,22.1237016087465,0,0.161766849947409,0,0,1.86391761218122,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0.101839363850316,1.36847667671102,0.252722758433675,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0.268273401399619,0,0.16455984991348,0,0,0,5.26920276698522,0.268412837520744,0,0,0,0,0,0,0.128867461322093,0.605050573870028,1.33426826306922,2.09248188723815,0.474529061544512,0.658795818896044,0.754005626400808,0.397912944082302,0.19496408711912,0,0.216138049874694,0.199141273254367,0,1.14248512609729,3.38123207019241,7.94240178596726,17.0678188707511,28.2647354157984,59.5688179710504,22.8795729368383,20.8808308029028,30.8492909804501,2.96452627087149,0.166845105716094,0.393117990226406,0.449724224769707,2.23146133527353,14.7118067448974,35.3929933976174,64.4439347889816,78.1491793055671,39.8114049122718,23.0029130443767,49.1226050922424,30.8917296383415,2.52578877947112,4.4849353380478,8.68398338454061,0,0,0,0.169745085775188,0,0,0.952174563544055,0.195133647857799,0,0,0,0.327726629431476,1.55416483679306,0.433947175744535,0,0,23.6046851049137,9.3818493743609,0,0,0,6.81671503451807,3.15508219416257,3.51394869866975,1.29254038639679,0.238968797952552,0,0,0.404810701674894,0,0,0,6.38730383437209,2.84904965867608,0,0.329940245945071,1.32745138339963,0,0.302323556964751,0,0.295301892880773,0,1.29214146584111,0,0.356497378384721,0,1.05418608574999,0,0,0,0,0,0,0,0,0,1.17335854031855,7.62595455109753,0.441056796109924,0.8244312647074,0.645857706783622,5.1869115438214,1.07435109602823,0.492422699235184,0,0.18542530201051,0,0.206386867963223,0.370389054739423,0,0,0.457556346413045,0,0,0,0,0,0,0.324016022465404,0,2.40198820120795,1.48350781023303,5.53778153359751,1.57053565190418,0.259229946583586,0.621339313086926,0,0,0,0,0.129159823477731,0,0,1.3020438484395,0.104859344425711,0.483168241652012,0.288030006257865,1.89606672376907,0,0,0,0,0.198681354781265,0,0,0,0,0.100826185136841,0,0.192423683280659,0,0,0,0,0.167884616364078,0.965947970160952,3.19060208267009,0.549454872801795,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0.972426868273176,1.67690530102386,5.69914876195044,6.22290837844523,4.73880631649457,4.1719497246936,4.80124702351215,7.35089969681695,5.47016390019621,5.99305647807247,6.78666615491614,6.66251439885114,8.57328644309533,5.44656331940821,8.48800570040302,5.35711671044299,4.41596760403192,5.48590803816665,6.74408063405482,6.19934093863034,6.54058874845478,5.64656282491984,6.51532480765909,5.12198324043763,6.31367307450823,6.92600980613895,4.48913817326191,5.21994079746366,6.00877342490937,4.50154147486658,6.04253680625267,4.24394544158511,0.249810577937946,10.7608539884888,13.3220053509945,1.14772999241306,1.10295709559758,0.927471342481686 | ||
|short_description=p5@Pcx | |short_description=p5@Pcx | ||
}} | }} |
Latest revision as of 20:46, 25 September 2015
Short description: | p5@Pcx |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Pcx_5end |
Coexpression cluster: | MCL_coexpression_mm9:652 |
Association with transcript: | 0bp_to_ENSMUST00000113825, NM_008797, uc008gag.2_5end |
EntrezGene: | Pcx |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
abdomen element | 5.88e-15 | 49 |
abdominal segment element | 5.88e-15 | 49 |
abdominal segment of trunk | 5.88e-15 | 49 |
abdomen | 5.88e-15 | 49 |
exocrine gland | 3.43e-13 | 25 |
exocrine system | 3.43e-13 | 25 |
digestive tract diverticulum | 1.44e-12 | 23 |
sac | 1.44e-12 | 23 |
liver | 3.62e-12 | 22 |
epithelial sac | 3.62e-12 | 22 |
digestive gland | 3.62e-12 | 22 |
epithelium of foregut-midgut junction | 3.62e-12 | 22 |
anatomical boundary | 3.62e-12 | 22 |
hepatobiliary system | 3.62e-12 | 22 |
foregut-midgut junction | 3.62e-12 | 22 |
hepatic diverticulum | 3.62e-12 | 22 |
liver primordium | 3.62e-12 | 22 |
septum transversum | 3.62e-12 | 22 |
liver bud | 3.62e-12 | 22 |
mesenchyme | 6.72e-10 | 61 |
entire embryonic mesenchyme | 6.72e-10 | 61 |
subdivision of trunk | 5.26e-09 | 66 |
trunk region element | 2.51e-07 | 79 |
trunk mesenchyme | 7.06e-07 | 45 |