FFCP PHASE1:Hg19::chr12:71551604..71551613,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7103 | |EntrezGene=7103 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11855 | |HGNC=11855 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=6bp_to_uc009zrt.1_5end | |association_with_transcript=6bp_to_uc009zrt.1_5end | ||
|cluster_id=chr12:71551604..71551613,- | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_8_at_TSPAN8_5end | |description=CAGE_peak_8_at_TSPAN8_5end | ||
|id=chr12:71551604..71551613,- | |id=chr12:71551604..71551613,- | ||
|ontology_enrichment_celltype=CL:1000306!2.72e-12!4;CL:0002547!2.72e-12!4;CL:0002178!2.89e-10!3;CL:0002150!5.39e-10!3;CL:0000861!5.39e-10!3 | |ontology_enrichment_celltype=CL:1000306!2.72e-12!4;CL:0002547!2.72e-12!4;CL:0002178!2.89e-10!3;CL:0002150!5.39e-10!3;CL:0000861!5.39e-10!3 | ||
|ontology_enrichment_celltype_v019=CL:0002553;1.65e-10;1!CL:0000167;9.40e-10;1!CL:0000164;9.40e-10;1!CL:0000502;9.40e-10;1!CL:0000172;9.40e-10;1!CL:0000173;9.40e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,1.65e-10,1;CL:0000167,1.07e-09,1;CL:0000164,1.07e-09,1;CL:0000502,1.07e-09,1;CL:0000172,1.07e-09,1;CL:0000173,1.07e-09,1;CL:0002351,1.07e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0001045;6.33e-10;1!CL:0002351;9.40e-10;1!UBERON:0006242;9.40e-10;1 | |||
|ontology_enrichment_disease=DOID:3493!1.77e-07!2;DOID:3119!1.99e-07!14;DOID:4929!2.76e-07!2;DOID:299!7.46e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:4430;9.40e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,1.07e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0005409!1.32e-19!35;UBERON:0000160!1.61e-14!27;UBERON:0000415!2.72e-12!4;UBERON:0007240!2.72e-12!4;UBERON:0005742!2.72e-12!4;UBERON:0005734!2.72e-12!4;UBERON:0004664!2.72e-12!4;UBERON:0004663!2.72e-12!4;UBERON:0000059!2.05e-10!11;UBERON:0004921!6.27e-10!129;UBERON:0004185!6.27e-10!129;UBERON:0001155!4.21e-09!9;UBERON:0001007!6.94e-09!155;UBERON:0001555!6.94e-09!155;UBERON:0007026!6.94e-09!155;UBERON:0000060!1.41e-08!12;UBERON:0004119!1.29e-07!169;UBERON:0000925!1.29e-07!169;UBERON:0006595!1.29e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;1.79e-44;22!UBERON:0000160;2.28e-38;17!UBERON:0004921;4.19e-25;33!UBERON:0000059;5.39e-20;11!UBERON:0002108;1.38e-16;4!UBERON:0001155;4.68e-16;9!UBERON:0001154;6.33e-10;1!UBERON:0001153;6.33e-10;1!UBERON:0009854;6.33e-10;1!UBERON:0001555;2.23e-09;54!UBERON:0000945;5.89e-08;5!UBERON:0010039;5.89e-08;5!UBERON:0004907;7.90e-08;5!UBERON:0001007;1.49e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.90e-39,25;UBERON:0000160,2.49e-38,17;UBERON:0000059,5.61e-20,11;UBERON:0002108,1.45e-16,4;UBERON:0001155,4.77e-16,9;UBERON:0004921,4.84e-12,118;UBERON:0001007,6.74e-11,145;UBERON:0001555,6.74e-11,145;UBERON:0007026,6.74e-11,145;UBERON:0001154,6.33e-10,1;UBERON:0001153,6.33e-10,1;UBERON:0001045,6.33e-10,1;UBERON:0004119,1.22e-09,160;UBERON:0000925,1.22e-09,160;UBERON:0006595,1.22e-09,160;UBERON:0004907,8.04e-08,5 | |||
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| ||
|short_description=p8@TSPAN8 | |short_description=p8@TSPAN8 | ||
}} | }} |
Latest revision as of 16:36, 24 September 2015
Short description: | p8@TSPAN8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_TSPAN8_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 6bp_to_uc009zrt.1_5end |
EntrezGene: | TSPAN8 |
HGNC: | 11855 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 1.65e-10 | 1 |
peptide hormone secreting cell | 1.07e-09 | 1 |
enteroendocrine cell | 1.07e-09 | 1 |
type D enteroendocrine cell | 1.07e-09 | 1 |
somatostatin secreting cell | 1.07e-09 | 1 |
pancreatic D cell | 1.07e-09 | 1 |
progenitor cell of endocrine pancreas | 1.07e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 3.90e-39 | 25 |
intestine | 2.49e-38 | 17 |
large intestine | 5.61e-20 | 11 |
small intestine | 1.45e-16 | 4 |
colon | 4.77e-16 | 9 |
subdivision of digestive tract | 4.84e-12 | 118 |
digestive system | 6.74e-11 | 145 |
digestive tract | 6.74e-11 | 145 |
primitive gut | 6.74e-11 | 145 |
vermiform appendix | 6.33e-10 | 1 |
caecum | 6.33e-10 | 1 |
midgut | 6.33e-10 | 1 |
endoderm-derived structure | 1.22e-09 | 160 |
endoderm | 1.22e-09 | 160 |
presumptive endoderm | 1.22e-09 | 160 |
lower digestive tract | 8.04e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.07e-09 | 1 |