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FFCP PHASE1:Mm9::chr3:156225105..156225160,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=320840
|EntrezGene=320840
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=D3Z4T6
|UniProt=D3Z4T6
|association_with_transcript=172bp_to_ENSMUST00000106065_5end
|association_with_transcript=172bp_to_ENSMUST00000106065_5end
|cluster_id=chr3:156225105..156225160,+
|description=CAGE_peak_2_at_Negr1_5end
|description=CAGE_peak_2_at_Negr1_5end
|id=chr3:156225105..156225160,+
|id=chr3:156225105..156225160,+
|ontology_enrichment_celltype=CL:0000117!1.37e-13!23;CL:0000337!1.37e-13!23;CL:0000540!1.01e-12!33;CL:0000047!1.01e-12!33;CL:0000031!1.01e-12!33;CL:0000404!1.01e-12!33;CL:0000393!1.46e-10!39;CL:0000211!1.46e-10!39;CL:0000221!9.76e-08!44;CL:0000133!9.76e-08!44;CL:0002319!1.75e-07!43
|ontology_enrichment_celltype_v019_2=CL:0000117,7.04e-18,23;CL:0000337,7.04e-18,23;CL:0000540,2.14e-11,33;CL:0000047,2.14e-11,33;CL:0000031,2.14e-11,33;CL:0000404,2.14e-11,33;CL:0000393,1.17e-09,39;CL:0000211,1.17e-09,39;CL:0000221,4.30e-07,44;CL:0000133,4.30e-07,44;CL:0002319,8.70e-07,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!3.08e-23!73;UBERON:0005743!3.08e-23!73;UBERON:0000073!1.92e-22!75;UBERON:0001016!1.92e-22!75;UBERON:0001049!1.45e-21!52;UBERON:0005068!1.45e-21!52;UBERON:0006241!1.45e-21!52;UBERON:0007135!1.45e-21!52;UBERON:0004121!1.91e-20!102;UBERON:0000924!1.91e-20!102;UBERON:0006601!1.91e-20!102;UBERON:0000033!2.13e-20!63;UBERON:0002346!2.26e-20!71;UBERON:0003075!2.26e-20!71;UBERON:0007284!2.26e-20!71;UBERON:0000955!2.58e-20!50;UBERON:0006238!2.58e-20!50;UBERON:0002616!1.30e-19!49;UBERON:0002020!5.46e-19!34;UBERON:0003056!8.54e-18!49;UBERON:0003080!2.57e-17!40;UBERON:0002780!1.03e-16!39;UBERON:0001890!1.03e-16!39;UBERON:0006240!1.03e-16!39;UBERON:0002791!8.56e-16!29;UBERON:0003528!8.56e-16!29;UBERON:0001893!8.56e-16!29;UBERON:0000956!2.67e-11!21;UBERON:0001869!2.67e-11!21;UBERON:0000203!2.67e-11!21;UBERON:0000153!1.22e-09!94;UBERON:0002619!2.13e-09!17;UBERON:0007811!4.51e-09!86;UBERON:0002021!1.15e-08!10;UBERON:0000411!1.15e-08!10;UBERON:0001950!1.15e-08!10;UBERON:0000025!3.48e-07!114;UBERON:0000468!7.02e-07!333;UBERON:0004111!8.66e-07!122
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.89e-32,54;UBERON:0001049,4.78e-30,52;UBERON:0005068,4.78e-30,52;UBERON:0006241,4.78e-30,52;UBERON:0007135,4.78e-30,52;UBERON:0001017,3.76e-27,73;UBERON:0002346,2.26e-26,64;UBERON:0003075,2.26e-26,64;UBERON:0007284,2.26e-26,64;UBERON:0001016,7.62e-26,75;UBERON:0000955,7.79e-26,47;UBERON:0006238,7.79e-26,47;UBERON:0002020,2.73e-25,34;UBERON:0002616,6.96e-25,46;UBERON:0003080,2.01e-23,40;UBERON:0010371,1.33e-22,73;UBERON:0002780,1.34e-22,39;UBERON:0001890,1.34e-22,39;UBERON:0006240,1.34e-22,39;UBERON:0003056,6.25e-22,49;UBERON:0004121,5.78e-21,95;UBERON:0000924,5.78e-21,95;UBERON:0006601,5.78e-21,95;UBERON:0003528,6.04e-21,29;UBERON:0002791,6.04e-21,29;UBERON:0001893,6.04e-21,29;UBERON:0000956,7.71e-15,21;UBERON:0001869,7.71e-15,21;UBERON:0000203,7.71e-15,21;UBERON:0010314,1.45e-14,92;UBERON:0002619,2.93e-12,17;UBERON:0002021,3.34e-11,10;UBERON:0000411,3.34e-11,10;UBERON:0001950,3.34e-11,10;UBERON:0000025,5.06e-08,114;UBERON:0004111,2.44e-07,122;UBERON:0002420,2.80e-07,8;UBERON:0007245,2.80e-07,8;UBERON:0010009,2.80e-07,8;UBERON:0010011,2.80e-07,8;UBERON:0000454,2.80e-07,8;UBERON:0003076,4.89e-07,12;UBERON:0003057,4.89e-07,12
|phase1_expression=1.76163731815273,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,4.5072943780067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25896817975577,1.31790010585369,0.550640256485045,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,13.5552028775931,12.1667925232568,10.775133859605,0,0,0,0,0,0.299600110518405,0,4.66603255388149,3.51015439662396,4.83747411108179,10.8547374073445,12.1477697523387,6.36952155917761,5.55903731905771,6.43453150627015,12.1127469099328,10.9811110753261,9.98442466165583,9.75958529203434,11.0700048758916,10.4182674111352,6.42120897703176,7.31591393041184,9.77908785771585,21.5078867395777,20.3591503542717,12.1159639786445,0.075726193333184,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.983110940922263,0,0,0,2.11265129665021,0,0,0,0,0,0,1.1418387971906,0.776813650941515,0.593768556259299,0.693941307064543,0.608930956624282,0.230615497256059,0,0.23517741427141,0.125666591329675,0,2.02439099687876,0,0.161766849947409,0.220841518460394,0,0,26.6430525280508,20.7352239745321,0.255457055208591,0,0,0,11.5338792341713,19.2150253183823,15.4554853098823,38.9366477230699,43.4716277461562,9.97382613885888,15.8996437806402,0.305518091550949,0.248813941220186,0,1.47309299120532,0.910843100738926,0,0.720248519221397,0.753524089178575,1.97305847538851,2.69038812598185,1.49922759295566,4.65666067330228,0,0.567318240503458,2.28736461413134,0.657587197282725,1.66828349535359,1.0447564995665,0.823128545631774,0.995171334092466,0,0,0,0.828503090142008,1.40715635988658,0.180062061461015,0.23674473558521,0.590292695242212,0.308534225774757,0.465067889500816,0,0,0.16455984991348,0.492502392237286,0.324275238183423,0,0.219550115291051,0.402619256281115,20.3981250107203,19.9634948015812,0,0,0.639864751605702,1.62565670302307,1.15980715189884,0.403367049246685,0.667134131534611,0.190225626112559,0,0.329397909448022,0.502670417600539,0.198956472041151,0.38992817423824,0.898819408654221,0,0,0.758671603812327,2.62771579002376,0,1.62921062276251,1.93952487167626,0.771494018793504,1.96033265085198,0.295220295959204,0,0.123397163921801,0,0.166845105716094,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.947457058852424,1.79261474086228,1.52770577197669,1.40814148973101,0.670025029767263,0.952174563544055,0,0.945810864637146,0.44292937929755,1.2756381492599,0.327726629431476,0,0.433947175744535,0,0,0.491764273019036,0.275936746304732,7.86697890940181,6.21221938938677,0.163934945376675,0,0.631016438832513,0.390438744296638,0.861693590931196,0.238968797952552,0.891194696329576,1.13230612315533,0.809621403349789,0.584511715822624,0.790575555893047,29.8828824272281,1.13552068166615,0.35613120733451,0.977321756121456,0.329940245945071,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,1.02131881726136,1.62054984628179,0,1.07168517515796,1.77340233642274,1.60531935841864,1.15184314421485,1.2178597964584,0,0,0,0.65954501176592,0.322928853391811,0.180938774784468,0.119372344003136,0.328281799490123,0,5.7481843623258,0,0,0,0,0,0,0,0,0,0,0.632671987162271,1.62655573701479,0.540026704109006,0,0.436725127492355,0.269728692769641,1.1571483801547,0,0.388844919875379,0,0,0.299033092087958,0.165458490457098,0.194451188344048,0.258319646955462,0.506868376472335,0.352071715937262,0.13020438484395,0.314578033277133,0.241584120826006,0,0.316011120628178,0.405450430580328,0,0,0.179026695667481,0,0,0,0,0.0762068066549998,0,0,0,0.116876902181569,0.226730383615211,0,0,0,0.579568782096571,0.187682475451182,0.549454872801795,0.428736758158132,0,65.5112137435797,50.6357760157895,61.2998199380154,50.6966887913878,56.8618491409633,44.5682399459923,61.4270475210943,44.1314779159736,45.3142408984205,45.0451471224083,0.207574695168353,1.59609949360412,2.39027048055788,2.43106717068294,1.67690530102386,1.83843508450014,5.33392146723877,2.88449080134452,4.1719497246936,3.28506375292937,3.04175159868288,2.82939512079114,2.71560371662659,4.48176066834085,4.25022470271538,3.33405583898152,4.05595140806994,4.24400285020151,2.06042950401653,3.97437084362873,5.82877729055206,4.61437096014278,3.33810665926249,6.24989591519013,4.42314087952054,3.38458431566706,3.10977553883713,3.6829759601298,2.71608227691724,2.80571135828869,3.55905054372522,2.1670986122624,4.09231043169689,2.63392630016142,1.92906610981141,4.24677982494508,2.57324769289949,2.57845264857958,1.14772999241306,1.10295709559758,0.927471342481686
|phase1_expression=1.76163731815273,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,4.5072943780067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25896817975577,1.31790010585369,0.550640256485045,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,13.5552028775931,12.1667925232568,10.775133859605,0,0,0,0,0,0.299600110518405,0,4.66603255388149,3.51015439662396,4.83747411108179,10.8547374073445,12.1477697523387,6.36952155917761,5.55903731905771,6.43453150627015,12.1127469099328,10.9811110753261,9.98442466165583,9.75958529203434,11.0700048758916,10.4182674111352,6.42120897703176,7.31591393041184,9.77908785771585,21.5078867395777,20.3591503542717,12.1159639786445,0.075726193333184,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.983110940922263,0,0,0,2.11265129665021,0,0,0,0,0,0,1.1418387971906,0.776813650941515,0.593768556259299,0.693941307064543,0.608930956624282,0.230615497256059,0,0.23517741427141,0.125666591329675,0,2.02439099687876,0,0.161766849947409,0.220841518460394,0,0,26.6430525280508,20.7352239745321,0.255457055208591,0,0,0,11.5338792341713,19.2150253183823,15.4554853098823,38.9366477230699,43.4716277461562,9.97382613885888,15.8996437806402,0.305518091550949,0.248813941220186,0,1.47309299120532,0.910843100738926,0,0.720248519221397,0.753524089178575,1.97305847538851,2.69038812598185,1.49922759295566,4.65666067330228,0,0.567318240503458,2.28736461413134,0.657587197282725,1.66828349535359,1.0447564995665,0.823128545631774,0.995171334092466,0,0,0,0.828503090142008,1.40715635988658,0.180062061461015,0.23674473558521,0.590292695242212,0.308534225774757,0.465067889500816,0,0,0.16455984991348,0.492502392237286,0.324275238183423,0,0.219550115291051,0.402619256281115,20.3981250107203,19.9634948015812,0,0,0.639864751605702,1.62565670302307,1.15980715189884,0.403367049246685,0.667134131534611,0.190225626112559,0,0.329397909448022,0.502670417600539,0.198956472041151,0.38992817423824,0.898819408654221,0,0,0.758671603812327,2.62771579002376,0,1.62921062276251,1.93952487167626,0.771494018793504,1.96033265085198,0.295220295959204,0,0.123397163921801,0,0.166845105716094,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.947457058852424,1.79261474086228,1.52770577197669,1.40814148973101,0.670025029767263,0.952174563544055,0,0.945810864637146,0.44292937929755,1.2756381492599,0.327726629431476,0,0.433947175744535,0,0,0.491764273019036,0.275936746304732,7.86697890940181,6.21221938938677,0.163934945376675,0,0.631016438832513,0.390438744296638,0.861693590931196,0.238968797952552,0.891194696329576,1.13230612315533,0.809621403349789,0.584511715822624,0.790575555893047,29.8828824272281,1.13552068166615,0.35613120733451,0.977321756121456,0.329940245945071,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,1.02131881726136,1.62054984628179,0,1.07168517515796,1.77340233642274,1.60531935841864,1.15184314421485,1.2178597964584,0,0,0,0.65954501176592,0.322928853391811,0.180938774784468,0.119372344003136,0.328281799490123,0,5.7481843623258,0,0,0,0,0,0,0,0,0,0,0.632671987162271,1.62655573701479,0.540026704109006,0,0.436725127492355,0.269728692769641,1.1571483801547,0,0.388844919875379,0,0,0.299033092087958,0.165458490457098,0.194451188344048,0.258319646955462,0.506868376472335,0.352071715937262,0.13020438484395,0.314578033277133,0.241584120826006,0,0.316011120628178,0.405450430580328,0,0,0.179026695667481,0,0,0,0,0.0762068066549998,0,0,0,0.116876902181569,0.226730383615211,0,0,0,0.579568782096571,0.187682475451182,0.549454872801795,0.428736758158132,0,65.5112137435797,50.6357760157895,61.2998199380154,50.6966887913878,56.8618491409633,44.5682399459923,61.4270475210943,44.1314779159736,45.3142408984205,45.0451471224083,0.207574695168353,1.59609949360412,2.39027048055788,2.43106717068294,1.67690530102386,1.83843508450014,5.33392146723877,2.88449080134452,4.1719497246936,3.28506375292937,3.04175159868288,2.82939512079114,2.71560371662659,4.48176066834085,4.25022470271538,3.33405583898152,4.05595140806994,4.24400285020151,2.06042950401653,3.97437084362873,5.82877729055206,4.61437096014278,3.33810665926249,6.24989591519013,4.42314087952054,3.38458431566706,3.10977553883713,3.6829759601298,2.71608227691724,2.80571135828869,3.55905054372522,2.1670986122624,4.09231043169689,2.63392630016142,1.92906610981141,4.24677982494508,2.57324769289949,2.57845264857958,1.14772999241306,1.10295709559758,0.927471342481686
|short_description=p2@Negr1
|short_description=p2@Negr1
}}
}}

Latest revision as of 20:25, 1 October 2015

Short description:p2@Negr1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Negr1_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: 172bp_to_ENSMUST00000106065_5end
EntrezGene:Negr1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Negr1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.76
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.26
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.32
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C313.56
Mouse Granule cells, donor2.CNhs12357.11731-123E312.17
Mouse Granule cells, donor3.CNhs12108.11636-122C710.78
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.67
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.51
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F110.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D512.15
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.56
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D312.11
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F310.98
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.98
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D49.76
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F411.07
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D810.42
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.42
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I69.78
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D621.51
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F620.36
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E112.12
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.11
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.14
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H12.02
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B226.64
cerebellum, neonate N30.CNhs11135.1395-42I220.74
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A411.53
corpus striatum, adult.CNhs10487.19-21D819.22
corpus striatum, neonate N00.CNhs11226.630-43F115.46
cortex, adult.CNhs10473.12-14D538.94
cortex, neonate N30.CNhs11107.1392-42F243.47
diencephalon, adult.CNhs10482.20-12F29.97
diencephalon, neonate N30.CNhs11201.1388-42B215.90
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C61.97
eyeball, neonate N01.CNhs11140.1532-43E72.69
eyeball, neonate N02.CNhs11205.1551-44G81.50
eyeball, neonate N16.CNhs11188.777-19A24.66
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E22.29
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E820.40
hippocampus, neonate N00.CNhs11228.627-43G119.96
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D81.16
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F82.63
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.63
kidney, embryo E18.CNhs11001.1288-20C71.94
kidney, neonate N00.CNhs11214.646-21G70.77
kidney, neonate N10.CNhs11206.758-6D51.96
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F81.79
lung, embryo E15.CNhs11020.432-17C51.53
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E61.28
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C27.87
medulla oblongata, neonate N30.CNhs11200.1396-42A36.21
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I929.88
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E61.62
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B91.77
pituitary gland, embryo E16.CNhs11036.449-43F61.61
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C95.75
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G81.63
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A91.16
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A165.51
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A250.64
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A361.30
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D750.70
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A456.86
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A544.57
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A661.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A744.13
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A845.31
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A945.05
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H22.39
whole body, embryo E14.5.CNhs10578.420-27D22.43
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.17
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.04
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.83
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.72
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.48
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.25
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.06
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.24
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.97
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.61
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.25
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.42
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.38
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.72
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.09
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.63
whole body, embryo E17.5.CNhs10513.490-9F91.93
whole body, embryo E17.CNhs10517.475-3I54.25
whole body, embryo E18.CNhs10516.493-3B32.57
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)7.04e-1823
neuroblast (sensu Vertebrata)7.04e-1823
neuron2.14e-1133
neuronal stem cell2.14e-1133
neuroblast2.14e-1133
electrically signaling cell2.14e-1133
electrically responsive cell1.17e-0939
electrically active cell1.17e-0939
ectodermal cell4.30e-0744
neurectodermal cell4.30e-0744
neural cell8.70e-0743

Uber anatomy
Ontology termp-valuen
regional part of nervous system6.89e-3254
neural tube4.78e-3052
neural rod4.78e-3052
future spinal cord4.78e-3052
neural keel4.78e-3052
central nervous system3.76e-2773
neurectoderm2.26e-2664
neural plate2.26e-2664
presumptive neural plate2.26e-2664
nervous system7.62e-2675
brain7.79e-2647
future brain7.79e-2647
gray matter2.73e-2534
regional part of brain6.96e-2546
anterior neural tube2.01e-2340
ecto-epithelium1.33e-2273
regional part of forebrain1.34e-2239
forebrain1.34e-2239
future forebrain1.34e-2239
pre-chordal neural plate6.25e-2249
ectoderm-derived structure5.78e-2195
ectoderm5.78e-2195
presumptive ectoderm5.78e-2195
brain grey matter6.04e-2129
regional part of telencephalon6.04e-2129
telencephalon6.04e-2129
cerebral cortex7.71e-1521
cerebral hemisphere7.71e-1521
pallium7.71e-1521
structure with developmental contribution from neural crest1.45e-1492
regional part of cerebral cortex2.93e-1217
occipital lobe3.34e-1110
visual cortex3.34e-1110
neocortex3.34e-1110
tube5.06e-08114
anatomical conduit2.44e-07122
basal ganglion2.80e-078
nuclear complex of neuraxis2.80e-078
aggregate regional part of brain2.80e-078
collection of basal ganglia2.80e-078
cerebral subcortex2.80e-078
posterior neural tube4.89e-0712
chordal neural plate4.89e-0712
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