FFCP PHASE1:Mm9::chr3:67319626..67319659,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=109222 | |EntrezGene=109222 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=73 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BVL6 | |UniProt=Q8BVL6 | ||
|association_with_transcript=-181bp_to_ENSMUST00000054825,NM_001164763,uc008plo.2_5end | |association_with_transcript=-181bp_to_ENSMUST00000054825,NM_001164763,uc008plo.2_5end | ||
|cluster_id=chr3:67319626..67319659,- | |||
|description=CAGE_peak_6_at_Rarres1_5end | |description=CAGE_peak_6_at_Rarres1_5end | ||
|id=chr3:67319626..67319659,- | |id=chr3:67319626..67319659,- | ||
|ontology_enrichment_celltype=CL:0000181!3.95e-07!5;CL:0000417!3.95e-07!5;CL:0000668!3.95e-07!5;CL:0000412!3.95e-07!5;CL:0000182!3.95e-07!5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,8.04e-21,5;CL:0000057,9.86e-08,1;CL:0000632,9.86e-08,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.33e-17!22;UBERON:0007499!2.33e-17!22;UBERON:0006925!2.33e-17!22;UBERON:0009497!2.33e-17!22;UBERON:0000015!2.33e-17!22;UBERON:0002423!2.33e-17!22;UBERON:0006235!2.33e-17!22;UBERON:0008835!2.33e-17!22;UBERON:0003894!2.33e-17!22;UBERON:0004161!2.33e-17!22;UBERON:0008836!2.33e-17!22;UBERON:0009854!2.01e-16!23;UBERON:0009856!2.01e-16!23;UBERON:0002365!8.92e-15!25;UBERON:0002330!8.92e-15!25;UBERON:0005256!7.85e-13!47;UBERON:0005172!9.10e-12!49;UBERON:0005173!9.10e-12!49;UBERON:0002417!9.10e-12!49;UBERON:0000916!9.10e-12!49;UBERON:0002368!6.00e-11!60;UBERON:0002530!1.20e-09!65;UBERON:0000949!3.81e-08!72;UBERON:0003914!4.91e-08!47;UBERON:0009569!2.30e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.40e-33,22;UBERON:0007499,2.40e-33,22;UBERON:0006925,2.40e-33,22;UBERON:0009497,2.40e-33,22;UBERON:0000015,2.40e-33,22;UBERON:0002423,2.40e-33,22;UBERON:0006235,2.40e-33,22;UBERON:0008835,2.40e-33,22;UBERON:0003894,2.40e-33,22;UBERON:0004161,2.40e-33,22;UBERON:0008836,2.40e-33,22;UBERON:0009854,7.48e-32,23;UBERON:0009856,7.48e-32,23;UBERON:0002365,3.19e-29,25;UBERON:0002330,3.19e-29,25;UBERON:0005256,9.70e-16,45;UBERON:0003914,5.10e-15,47;UBERON:0005172,2.34e-14,49;UBERON:0005173,2.34e-14,49;UBERON:0002417,2.34e-14,49;UBERON:0000916,2.34e-14,49;UBERON:0003929,1.17e-12,55;UBERON:0002368,1.68e-11,60;UBERON:0003104,2.73e-11,61;UBERON:0009142,2.73e-11,61;UBERON:0002530,1.62e-10,65;UBERON:0000490,2.44e-10,66;UBERON:0009569,2.44e-10,66;UBERON:0005911,7.81e-10,69;UBERON:0000949,2.27e-09,72;UBERON:0005177,2.01e-08,79;UBERON:0001041,2.66e-08,80;UBERON:0002100,3.14e-07,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.202753862439029,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0,3.44169550792555,1.3599426674155,14.0322829825832,1.94932925234301,4.03224198387602,4.21333260395256,0,0,0,0,0,0,0,0,0,0,5.25245846707676,0,0.29688427812965,0,0.304465478312141,0,0,0.117588707135705,0.125666591329675,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,1.48226313543574,0,0,0,0,0,0.25462585178142,0,0.162135226775035,0.274561413188081,1.43768206527355,0.744281895337007,1.24815069245824,1.26289438973556,3.94674309748207,2.8946611281802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0.214337035031592,0.177340233642274,0.178368817602071,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0,0.129159823477731,0.506868376472335,0.469428954583016,1.3020438484395,0.314578033277133,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.202753862439029,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0,3.44169550792555,1.3599426674155,14.0322829825832,1.94932925234301,4.03224198387602,4.21333260395256,0,0,0,0,0,0,0,0,0,0,5.25245846707676,0,0.29688427812965,0,0.304465478312141,0,0,0.117588707135705,0.125666591329675,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,1.48226313543574,0,0,0,0,0,0.25462585178142,0,0.162135226775035,0.274561413188081,1.43768206527355,0.744281895337007,1.24815069245824,1.26289438973556,3.94674309748207,2.8946611281802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0.214337035031592,0.177340233642274,0.178368817602071,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0,0.129159823477731,0.506868376472335,0.469428954583016,1.3020438484395,0.314578033277133,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p6@Rarres1 | |short_description=p6@Rarres1 | ||
}} | }} |
Latest revision as of 16:07, 25 September 2015
Short description: | p6@Rarres1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Rarres1_5end |
Coexpression cluster: | MCL_coexpression_mm9:73 |
Association with transcript: | -181bp_to_ENSMUST00000054825, NM_001164763, uc008plo.2_5end |
EntrezGene: | Rarres1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 8.04e-21 | 5 |
fibroblast | 9.86e-08 | 1 |
hepatic stellate cell | 9.86e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
liver | 2.40e-33 | 22 |
epithelial sac | 2.40e-33 | 22 |
digestive gland | 2.40e-33 | 22 |
epithelium of foregut-midgut junction | 2.40e-33 | 22 |
anatomical boundary | 2.40e-33 | 22 |
hepatobiliary system | 2.40e-33 | 22 |
foregut-midgut junction | 2.40e-33 | 22 |
hepatic diverticulum | 2.40e-33 | 22 |
liver primordium | 2.40e-33 | 22 |
septum transversum | 2.40e-33 | 22 |
liver bud | 2.40e-33 | 22 |
digestive tract diverticulum | 7.48e-32 | 23 |
sac | 7.48e-32 | 23 |
exocrine gland | 3.19e-29 | 25 |
exocrine system | 3.19e-29 | 25 |
trunk mesenchyme | 9.70e-16 | 45 |
epithelial tube | 5.10e-15 | 47 |
abdomen element | 2.34e-14 | 49 |
abdominal segment element | 2.34e-14 | 49 |
abdominal segment of trunk | 2.34e-14 | 49 |
abdomen | 2.34e-14 | 49 |
gut epithelium | 1.17e-12 | 55 |
endocrine gland | 1.68e-11 | 60 |
mesenchyme | 2.73e-11 | 61 |
entire embryonic mesenchyme | 2.73e-11 | 61 |
gland | 1.62e-10 | 65 |
unilaminar epithelium | 2.44e-10 | 66 |
subdivision of trunk | 2.44e-10 | 66 |
endo-epithelium | 7.81e-10 | 69 |
endocrine system | 2.27e-09 | 72 |
trunk region element | 2.01e-08 | 79 |
foregut | 2.66e-08 | 80 |
trunk | 3.14e-07 | 90 |