FFCP PHASE1:Mm9::chr11:118770801..118770889,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=52897 | |EntrezGene=52897 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=39 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BIF2,A2A4W7,B7ZC13,D1GI07,Q8VI61 | |UniProt=Q8BIF2,A2A4W7,B7ZC13,D1GI07,Q8VI61 | ||
|association_with_transcript=0bp_to_ENSMUST00000017576,ENSMUST00000106278,ENSMUST00000106279,ENSMUST00000117731,ENSMUST00000120061,NM_001024931,NM_001039167,NM_001039168,uc007mpl.1,uc007mpm.1,uc007mpn.1,uc007mpo.1_5end | |association_with_transcript=0bp_to_ENSMUST00000017576,ENSMUST00000106278,ENSMUST00000106279,ENSMUST00000117731,ENSMUST00000120061,NM_001024931,NM_001039167,NM_001039168,uc007mpl.1,uc007mpm.1,uc007mpn.1,uc007mpo.1_5end | ||
|cluster_id=chr11:118770801..118770889,- | |||
|description=CAGE_peak_1_at_Rbfox3_5end | |description=CAGE_peak_1_at_Rbfox3_5end | ||
|id=chr11:118770801..118770889,- | |id=chr11:118770801..118770889,- | ||
|ontology_enrichment_celltype=CL:0000117!7.93e-14!23;CL:0000337!7.93e-14!23;CL:0000540!9.11e-12!33;CL:0000047!9.11e-12!33;CL:0000031!9.11e-12!33;CL:0000404!9.11e-12!33;CL:0000221!3.06e-08!44;CL:0000133!3.06e-08!44;CL:0002319!4.66e-08!43;CL:0000393!6.19e-08!39;CL:0000211!6.19e-08!39 | |ontology_enrichment_celltype=CL:0000117!7.93e-14!23;CL:0000337!7.93e-14!23;CL:0000540!9.11e-12!33;CL:0000047!9.11e-12!33;CL:0000031!9.11e-12!33;CL:0000404!9.11e-12!33;CL:0000221!3.06e-08!44;CL:0000133!3.06e-08!44;CL:0002319!4.66e-08!43;CL:0000393!6.19e-08!39;CL:0000211!6.19e-08!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.38e-17,23;CL:0000337,2.38e-17,23;CL:0000540,6.29e-12,33;CL:0000047,6.29e-12,33;CL:0000031,6.29e-12,33;CL:0000404,6.29e-12,33;CL:0000393,9.99e-09,39;CL:0000211,9.99e-09,39;CL:0000221,5.84e-08,44;CL:0000133,5.84e-08,44;CL:0002319,9.76e-08,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.18e-27!73;UBERON:0005743!2.18e-27!73;UBERON:0001049!4.72e-26!52;UBERON:0005068!4.72e-26!52;UBERON:0006241!4.72e-26!52;UBERON:0007135!4.72e-26!52;UBERON:0000073!9.29e-26!75;UBERON:0001016!9.29e-26!75;UBERON:0002346!1.35e-25!71;UBERON:0003075!1.35e-25!71;UBERON:0007284!1.35e-25!71;UBERON:0000033!2.81e-25!63;UBERON:0000955!5.76e-25!50;UBERON:0006238!5.76e-25!50;UBERON:0002616!3.62e-24!49;UBERON:0003056!7.07e-22!49;UBERON:0004121!4.82e-21!102;UBERON:0000924!4.82e-21!102;UBERON:0006601!4.82e-21!102;UBERON:0003080!2.35e-20!40;UBERON:0002020!5.27e-20!34;UBERON:0002780!1.21e-19!39;UBERON:0001890!1.21e-19!39;UBERON:0006240!1.21e-19!39;UBERON:0002791!4.58e-17!29;UBERON:0003528!4.58e-17!29;UBERON:0001893!4.58e-17!29;UBERON:0000956!3.18e-12!21;UBERON:0001869!3.18e-12!21;UBERON:0000203!3.18e-12!21;UBERON:0007811!4.23e-12!86;UBERON:0000153!1.35e-10!94;UBERON:0002619!9.92e-10!17;UBERON:0002021!1.23e-08!10;UBERON:0000411!1.23e-08!10;UBERON:0001950!1.23e-08!10 | |ontology_enrichment_uberon=UBERON:0001017!2.18e-27!73;UBERON:0005743!2.18e-27!73;UBERON:0001049!4.72e-26!52;UBERON:0005068!4.72e-26!52;UBERON:0006241!4.72e-26!52;UBERON:0007135!4.72e-26!52;UBERON:0000073!9.29e-26!75;UBERON:0001016!9.29e-26!75;UBERON:0002346!1.35e-25!71;UBERON:0003075!1.35e-25!71;UBERON:0007284!1.35e-25!71;UBERON:0000033!2.81e-25!63;UBERON:0000955!5.76e-25!50;UBERON:0006238!5.76e-25!50;UBERON:0002616!3.62e-24!49;UBERON:0003056!7.07e-22!49;UBERON:0004121!4.82e-21!102;UBERON:0000924!4.82e-21!102;UBERON:0006601!4.82e-21!102;UBERON:0003080!2.35e-20!40;UBERON:0002020!5.27e-20!34;UBERON:0002780!1.21e-19!39;UBERON:0001890!1.21e-19!39;UBERON:0006240!1.21e-19!39;UBERON:0002791!4.58e-17!29;UBERON:0003528!4.58e-17!29;UBERON:0001893!4.58e-17!29;UBERON:0000956!3.18e-12!21;UBERON:0001869!3.18e-12!21;UBERON:0000203!3.18e-12!21;UBERON:0007811!4.23e-12!86;UBERON:0000153!1.35e-10!94;UBERON:0002619!9.92e-10!17;UBERON:0002021!1.23e-08!10;UBERON:0000411!1.23e-08!10;UBERON:0001950!1.23e-08!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.96e-33,54;UBERON:0001049,3.57e-31,52;UBERON:0005068,3.57e-31,52;UBERON:0006241,3.57e-31,52;UBERON:0007135,3.57e-31,52;UBERON:0002346,9.84e-31,64;UBERON:0003075,9.84e-31,64;UBERON:0007284,9.84e-31,64;UBERON:0001017,8.18e-30,73;UBERON:0001016,2.04e-28,75;UBERON:0000955,2.78e-27,47;UBERON:0006238,2.78e-27,47;UBERON:0002616,2.73e-26,46;UBERON:0010371,3.02e-26,73;UBERON:0003056,3.91e-25,49;UBERON:0002020,5.96e-25,34;UBERON:0004121,9.19e-25,95;UBERON:0000924,9.19e-25,95;UBERON:0006601,9.19e-25,95;UBERON:0003080,2.06e-24,40;UBERON:0002780,1.66e-23,39;UBERON:0001890,1.66e-23,39;UBERON:0006240,1.66e-23,39;UBERON:0003528,3.64e-21,29;UBERON:0002791,3.64e-21,29;UBERON:0001893,3.64e-21,29;UBERON:0010314,1.48e-16,92;UBERON:0000956,6.10e-15,21;UBERON:0001869,6.10e-15,21;UBERON:0000203,6.10e-15,21;UBERON:0002619,9.64e-12,17;UBERON:0002021,1.14e-10,10;UBERON:0000411,1.14e-10,10;UBERON:0001950,1.14e-10,10;UBERON:0002420,2.14e-07,8;UBERON:0007245,2.14e-07,8;UBERON:0010009,2.14e-07,8;UBERON:0010011,2.14e-07,8;UBERON:0000454,2.14e-07,8;UBERON:0003076,3.83e-07,12;UBERON:0003057,3.83e-07,12 | |||
|phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.0907359574653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.219686182734472,0,0,1.43752564364972,0,0,0.336093799142464,0,0,0,16.1853168687678,14.2827564403449,19.6487735086916,0,0,0,0,0,0.299600110518405,0,25.3002654032685,19.8458729347585,21.2428210964896,19.7099179238624,15.6816664075646,14.9438775042244,10.4471563409878,11.0306254393203,15.4162233399144,37.41239005896,27.3419629196113,17.9365351313064,16.1018252740241,18.7528813400434,31.547678887156,19.6966913511088,30.1012548120316,24.1595440088408,19.362548588678,24.0455285114638,0,0,0,0,0,0.539703191637817,0,0,2.80888840263504,0.170430322578058,0,0,1.40843419776681,0,0,0,0,0,0,1.94112595522402,0,0.445326417194474,0.520455980298408,0,0.230615497256059,0,0.23517741427141,0.502666365318702,0,0,0,0,0.220841518460394,0,0,173.911793424859,200.440498420477,0.255457055208591,0,0,0,44.0384479850179,88.2976163439949,34.5549468310377,115.419348607672,110.980508481363,39.8953045554355,53.3773755492923,0,0.124406970610093,0.252722758433675,1.89397670297827,0.260240885925407,0.229902104433473,3.24111833649629,3.61691562805716,4.28629944653366,3.45907044769094,3.46696380870997,3.3631438196072,2.37124792226126,1.51284864134255,0,0,0,0.348252166522167,0,0.796137067273973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0.219550115291051,0,97.7848260823192,33.9585220851639,0,0.528901133327089,0.213288250535234,0.232236671860439,0.515469845288373,0.403367049246685,1.11189021922435,1.14135375667535,0,0.658795818896044,0.754005626400808,0.994782360205754,1.36474860983384,0,0.216138049874694,0.199141273254367,0.379335801906163,0.342745537829186,0,0.407302655690628,0.193952487167626,0.140271639780637,0,0,0,0,0,0.333690211432188,0,0.224862112384854,0,0.241177159752417,0,0.287696137450811,0,0,0,0,0.312037673114561,0.252578877947112,0.179397413521912,0,0,0.189491411770485,0,0.169745085775188,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,30.9862638676438,28.5996515284976,0,0,0.315508219416257,1.56175497718655,0.215423397732799,0.477937595905104,0.445597348164788,0.849229592366497,0,1.16902343164525,0,95.4324309772767,0,0.178065603667255,0,0.989820737835213,0,1.45668381692989,0.906970670894253,0.565815239267694,1.18120757152309,0.614870295887855,1.03371317267288,0,0.712994756769443,0.632073515871632,0,0,5.10659408630682,1.08036656418786,0.776152102696527,1.07168517515796,1.24138163549592,2.49716344642899,2.79733335023606,3.34911444026059,0,0,4.41056796109924,0,0,0,0,0.164140899745061,0.291480836629851,33.1911290598812,0,0,0,0,0,0,0,0,0,0,0,0.609958401380546,1.08005340821801,0.418176592028937,0.436725127492355,0,0.41326727862668,0,0.129614973291793,0,0,0,0,0,0.129159823477731,0,0,0.5208175393758,0,0,0,0,0.608175645870493,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,15.261977928543,1.12609485270709,1.09890974560359,0.643105137237198,3.00943262421218,82.4537690220917,86.0808192268421,73.9035212336822,84.723618895438,95.9115527678899,107.265933429337,90.453015031062,99.5209859125527,80.2062063902042,96.3034179858385,1.764384908931,9.97562183502578,5.9756762013947,5.34834777550247,4.61148957781561,4.41224420280034,2.44471400581777,3.09052585858341,2.56735367673452,4.54854981174835,3.8021894983536,5.28153755881013,3.65201879132541,6.14641463086745,5.51380501973887,6.19181798667996,5.33067899346335,5.20854895252004,5.76920261124629,4.41596760403192,2.40008476669791,4.61437096014278,4.29185141905178,3.92435324907287,3.76437521661322,4.56918882615053,3.29270351170991,4.73525480588117,4.6173398707593,3.92799590160417,5.69448086996036,5.41774653065599,6.54769669071503,5.88759996506671,4.24394544158511,11.2414760072076,3.97683734357194,5.37177635120746,1.3390183244819,0.882365676478062,0.927471342481686 | |phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.0907359574653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.219686182734472,0,0,1.43752564364972,0,0,0.336093799142464,0,0,0,16.1853168687678,14.2827564403449,19.6487735086916,0,0,0,0,0,0.299600110518405,0,25.3002654032685,19.8458729347585,21.2428210964896,19.7099179238624,15.6816664075646,14.9438775042244,10.4471563409878,11.0306254393203,15.4162233399144,37.41239005896,27.3419629196113,17.9365351313064,16.1018252740241,18.7528813400434,31.547678887156,19.6966913511088,30.1012548120316,24.1595440088408,19.362548588678,24.0455285114638,0,0,0,0,0,0.539703191637817,0,0,2.80888840263504,0.170430322578058,0,0,1.40843419776681,0,0,0,0,0,0,1.94112595522402,0,0.445326417194474,0.520455980298408,0,0.230615497256059,0,0.23517741427141,0.502666365318702,0,0,0,0,0.220841518460394,0,0,173.911793424859,200.440498420477,0.255457055208591,0,0,0,44.0384479850179,88.2976163439949,34.5549468310377,115.419348607672,110.980508481363,39.8953045554355,53.3773755492923,0,0.124406970610093,0.252722758433675,1.89397670297827,0.260240885925407,0.229902104433473,3.24111833649629,3.61691562805716,4.28629944653366,3.45907044769094,3.46696380870997,3.3631438196072,2.37124792226126,1.51284864134255,0,0,0,0.348252166522167,0,0.796137067273973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0.219550115291051,0,97.7848260823192,33.9585220851639,0,0.528901133327089,0.213288250535234,0.232236671860439,0.515469845288373,0.403367049246685,1.11189021922435,1.14135375667535,0,0.658795818896044,0.754005626400808,0.994782360205754,1.36474860983384,0,0.216138049874694,0.199141273254367,0.379335801906163,0.342745537829186,0,0.407302655690628,0.193952487167626,0.140271639780637,0,0,0,0,0,0.333690211432188,0,0.224862112384854,0,0.241177159752417,0,0.287696137450811,0,0,0,0,0.312037673114561,0.252578877947112,0.179397413521912,0,0,0.189491411770485,0,0.169745085775188,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,30.9862638676438,28.5996515284976,0,0,0.315508219416257,1.56175497718655,0.215423397732799,0.477937595905104,0.445597348164788,0.849229592366497,0,1.16902343164525,0,95.4324309772767,0,0.178065603667255,0,0.989820737835213,0,1.45668381692989,0.906970670894253,0.565815239267694,1.18120757152309,0.614870295887855,1.03371317267288,0,0.712994756769443,0.632073515871632,0,0,5.10659408630682,1.08036656418786,0.776152102696527,1.07168517515796,1.24138163549592,2.49716344642899,2.79733335023606,3.34911444026059,0,0,4.41056796109924,0,0,0,0,0.164140899745061,0.291480836629851,33.1911290598812,0,0,0,0,0,0,0,0,0,0,0,0.609958401380546,1.08005340821801,0.418176592028937,0.436725127492355,0,0.41326727862668,0,0.129614973291793,0,0,0,0,0,0.129159823477731,0,0,0.5208175393758,0,0,0,0,0.608175645870493,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,15.261977928543,1.12609485270709,1.09890974560359,0.643105137237198,3.00943262421218,82.4537690220917,86.0808192268421,73.9035212336822,84.723618895438,95.9115527678899,107.265933429337,90.453015031062,99.5209859125527,80.2062063902042,96.3034179858385,1.764384908931,9.97562183502578,5.9756762013947,5.34834777550247,4.61148957781561,4.41224420280034,2.44471400581777,3.09052585858341,2.56735367673452,4.54854981174835,3.8021894983536,5.28153755881013,3.65201879132541,6.14641463086745,5.51380501973887,6.19181798667996,5.33067899346335,5.20854895252004,5.76920261124629,4.41596760403192,2.40008476669791,4.61437096014278,4.29185141905178,3.92435324907287,3.76437521661322,4.56918882615053,3.29270351170991,4.73525480588117,4.6173398707593,3.92799590160417,5.69448086996036,5.41774653065599,6.54769669071503,5.88759996506671,4.24394544158511,11.2414760072076,3.97683734357194,5.37177635120746,1.3390183244819,0.882365676478062,0.927471342481686 | ||
|short_description=p1@Rbfox3 | |short_description=p1@Rbfox3 | ||
}} | }} |
Latest revision as of 02:01, 27 September 2015
Short description: | p1@Rbfox3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rbfox3_5end |
Coexpression cluster: | MCL_coexpression_mm9:39 |
Association with transcript: | 0bp_to_ENSMUST00000017576, ENSMUST00000106278, ENSMUST00000106279, ENSMUST00000117731, ENSMUST00000120061, NM_001024931, NM_001039167, NM_001039168, uc007mpl.1, uc007mpm.1, uc007mpn.1, uc007mpo.1_5end |
EntrezGene: | Rbfox3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.38e-17 | 23 |
neuroblast (sensu Vertebrata) | 2.38e-17 | 23 |
neuron | 6.29e-12 | 33 |
neuronal stem cell | 6.29e-12 | 33 |
neuroblast | 6.29e-12 | 33 |
electrically signaling cell | 6.29e-12 | 33 |
electrically responsive cell | 9.99e-09 | 39 |
electrically active cell | 9.99e-09 | 39 |
ectodermal cell | 5.84e-08 | 44 |
neurectodermal cell | 5.84e-08 | 44 |
neural cell | 9.76e-08 | 43 |