FFCP PHASE1:Mm9::chr11:48613543..48613573,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14694 | |EntrezGene=14694 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-260bp_to_ENSMUST00000142269_5end | |association_with_transcript=-260bp_to_ENSMUST00000142269_5end | ||
|cluster_id=chr11:48613543..48613573,+ | |||
|description=CAGE_peak_2_at_Gnb2l1_5end | |description=CAGE_peak_2_at_Gnb2l1_5end | ||
|id=chr11:48613543..48613573,+ | |id=chr11:48613543..48613573,+ | ||
|ontology_enrichment_celltype=CL:0000393!3.96e-14!39;CL:0000211!3.96e-14!39;CL:0000540!5.81e-14!33;CL:0000047!5.81e-14!33;CL:0000031!5.81e-14!33;CL:0000404!5.81e-14!33;CL:0000117!2.88e-12!23;CL:0000337!2.88e-12!23;CL:0000221!2.65e-09!44;CL:0000133!2.65e-09!44;CL:0002319!3.40e-09!43;CL:0000055!5.95e-09!50 | |ontology_enrichment_celltype=CL:0000393!3.96e-14!39;CL:0000211!3.96e-14!39;CL:0000540!5.81e-14!33;CL:0000047!5.81e-14!33;CL:0000031!5.81e-14!33;CL:0000404!5.81e-14!33;CL:0000117!2.88e-12!23;CL:0000337!2.88e-12!23;CL:0000221!2.65e-09!44;CL:0000133!2.65e-09!44;CL:0002319!3.40e-09!43;CL:0000055!5.95e-09!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000393,3.84e-14,39;CL:0000211,3.84e-14,39;CL:0000540,5.64e-14,33;CL:0000047,5.64e-14,33;CL:0000031,5.64e-14,33;CL:0000404,5.64e-14,33;CL:0000117,2.80e-12,23;CL:0000337,2.80e-12,23;CL:0000221,2.55e-09,44;CL:0000133,2.55e-09,44;CL:0002319,3.27e-09,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.17e-18!73;UBERON:0005743!1.17e-18!73;UBERON:0000073!3.91e-17!75;UBERON:0001016!3.91e-17!75;UBERON:0001049!4.54e-16!52;UBERON:0005068!4.54e-16!52;UBERON:0006241!4.54e-16!52;UBERON:0007135!4.54e-16!52;UBERON:0002346!4.40e-15!71;UBERON:0003075!4.40e-15!71;UBERON:0007284!4.40e-15!71;UBERON:0002020!4.26e-14!34;UBERON:0000955!4.66e-14!50;UBERON:0006238!4.66e-14!50;UBERON:0002616!4.83e-14!49;UBERON:0004121!8.12e-14!102;UBERON:0000924!8.12e-14!102;UBERON:0006601!8.12e-14!102;UBERON:0000033!1.10e-12!63;UBERON:0003080!1.59e-12!40;UBERON:0002780!4.32e-12!39;UBERON:0001890!4.32e-12!39;UBERON:0006240!4.32e-12!39;UBERON:0002791!3.01e-11!29;UBERON:0003528!3.01e-11!29;UBERON:0001893!3.01e-11!29;UBERON:0003056!5.38e-11!49;UBERON:0000153!3.29e-09!94;UBERON:0007811!2.37e-08!86;UBERON:0000956!2.90e-07!21;UBERON:0001869!2.90e-07!21;UBERON:0000203!2.90e-07!21 | |ontology_enrichment_uberon=UBERON:0001017!1.17e-18!73;UBERON:0005743!1.17e-18!73;UBERON:0000073!3.91e-17!75;UBERON:0001016!3.91e-17!75;UBERON:0001049!4.54e-16!52;UBERON:0005068!4.54e-16!52;UBERON:0006241!4.54e-16!52;UBERON:0007135!4.54e-16!52;UBERON:0002346!4.40e-15!71;UBERON:0003075!4.40e-15!71;UBERON:0007284!4.40e-15!71;UBERON:0002020!4.26e-14!34;UBERON:0000955!4.66e-14!50;UBERON:0006238!4.66e-14!50;UBERON:0002616!4.83e-14!49;UBERON:0004121!8.12e-14!102;UBERON:0000924!8.12e-14!102;UBERON:0006601!8.12e-14!102;UBERON:0000033!1.10e-12!63;UBERON:0003080!1.59e-12!40;UBERON:0002780!4.32e-12!39;UBERON:0001890!4.32e-12!39;UBERON:0006240!4.32e-12!39;UBERON:0002791!3.01e-11!29;UBERON:0003528!3.01e-11!29;UBERON:0001893!3.01e-11!29;UBERON:0003056!5.38e-11!49;UBERON:0000153!3.29e-09!94;UBERON:0007811!2.37e-08!86;UBERON:0000956!2.90e-07!21;UBERON:0001869!2.90e-07!21;UBERON:0000203!2.90e-07!21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.64e-19,73;UBERON:0001016,3.67e-17,75;UBERON:0000073,6.49e-17,54;UBERON:0001049,4.38e-16,52;UBERON:0005068,4.38e-16,52;UBERON:0006241,4.38e-16,52;UBERON:0007135,4.38e-16,52;UBERON:0002346,7.25e-16,64;UBERON:0003075,7.25e-16,64;UBERON:0007284,7.25e-16,64;UBERON:0010371,1.72e-14,73;UBERON:0002020,4.14e-14,34;UBERON:0004121,4.31e-14,95;UBERON:0000924,4.31e-14,95;UBERON:0006601,4.31e-14,95;UBERON:0010314,4.43e-13,92;UBERON:0000955,8.20e-13,47;UBERON:0006238,8.20e-13,47;UBERON:0002616,8.52e-13,46;UBERON:0003080,1.55e-12,40;UBERON:0002780,4.21e-12,39;UBERON:0001890,4.21e-12,39;UBERON:0006240,4.21e-12,39;UBERON:0003528,2.94e-11,29;UBERON:0002791,2.94e-11,29;UBERON:0001893,2.94e-11,29;UBERON:0003056,5.25e-11,49;UBERON:0000956,2.86e-07,21;UBERON:0001869,2.86e-07,21;UBERON:0000203,2.86e-07,21 | |||
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| ||
|short_description=p2@Gnb2l1 | |short_description=p2@Gnb2l1 | ||
}} | }} |
Latest revision as of 13:56, 1 October 2015
Short description: | p2@Gnb2l1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gnb2l1_5end |
Coexpression cluster: | NA |
Association with transcript: | -260bp_to_ENSMUST00000142269_5end |
EntrezGene: | Gnb2l1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 3.84e-14 | 39 |
electrically active cell | 3.84e-14 | 39 |
neuron | 5.64e-14 | 33 |
neuronal stem cell | 5.64e-14 | 33 |
neuroblast | 5.64e-14 | 33 |
electrically signaling cell | 5.64e-14 | 33 |
CNS neuron (sensu Vertebrata) | 2.80e-12 | 23 |
neuroblast (sensu Vertebrata) | 2.80e-12 | 23 |
ectodermal cell | 2.55e-09 | 44 |
neurectodermal cell | 2.55e-09 | 44 |
neural cell | 3.27e-09 | 43 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 9.64e-19 | 73 |
nervous system | 3.67e-17 | 75 |
regional part of nervous system | 6.49e-17 | 54 |
neural tube | 4.38e-16 | 52 |
neural rod | 4.38e-16 | 52 |
future spinal cord | 4.38e-16 | 52 |
neural keel | 4.38e-16 | 52 |
neurectoderm | 7.25e-16 | 64 |
neural plate | 7.25e-16 | 64 |
presumptive neural plate | 7.25e-16 | 64 |
ecto-epithelium | 1.72e-14 | 73 |
gray matter | 4.14e-14 | 34 |
ectoderm-derived structure | 4.31e-14 | 95 |
ectoderm | 4.31e-14 | 95 |
presumptive ectoderm | 4.31e-14 | 95 |
structure with developmental contribution from neural crest | 4.43e-13 | 92 |
brain | 8.20e-13 | 47 |
future brain | 8.20e-13 | 47 |
regional part of brain | 8.52e-13 | 46 |
anterior neural tube | 1.55e-12 | 40 |
regional part of forebrain | 4.21e-12 | 39 |
forebrain | 4.21e-12 | 39 |
future forebrain | 4.21e-12 | 39 |
brain grey matter | 2.94e-11 | 29 |
regional part of telencephalon | 2.94e-11 | 29 |
telencephalon | 2.94e-11 | 29 |
pre-chordal neural plate | 5.25e-11 | 49 |
cerebral cortex | 2.86e-07 | 21 |
cerebral hemisphere | 2.86e-07 | 21 |
pallium | 2.86e-07 | 21 |