FFCP PHASE1:Mm9::chr1:88423123..88423134,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=232 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:88423123..88423134,- | |||
|description=CAGE_peak_at_chr1:88423123..88423134,- | |description=CAGE_peak_at_chr1:88423123..88423134,- | ||
|id=chr1:88423123..88423134,- | |id=chr1:88423123..88423134,- | ||
|ontology_enrichment_celltype=CL:0000144!1.94e-12!121;CL:0000012!1.94e-12!121;CL:0002371!8.68e-12!118;CL:0000548!3.37e-11!115;CL:0000004!3.37e-11!115;CL:0000255!3.37e-11!115;CL:0000063!7.71e-09!66;CL:0002563!1.42e-08!9;CL:0002251!1.42e-08!9;CL:0000034!7.16e-08!97;CL:0000723!2.98e-07!91;CL:0000048!2.98e-07!91;CL:0000075!5.86e-07!7 | |ontology_enrichment_celltype=CL:0000144!1.94e-12!121;CL:0000012!1.94e-12!121;CL:0002371!8.68e-12!118;CL:0000548!3.37e-11!115;CL:0000004!3.37e-11!115;CL:0000255!3.37e-11!115;CL:0000063!7.71e-09!66;CL:0002563!1.42e-08!9;CL:0002251!1.42e-08!9;CL:0000034!7.16e-08!97;CL:0000723!2.98e-07!91;CL:0000048!2.98e-07!91;CL:0000075!5.86e-07!7 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.99e-40,9;CL:0002251,5.99e-40,9;CL:0000066,2.25e-36,25;CL:0000075,4.71e-29,7;CL:0000223,3.83e-27,20;CL:0000239,5.41e-24,6;CL:0000677,5.41e-24,6;CL:0000584,5.41e-24,6;CL:0002076,1.13e-23,15;CL:0002250,9.33e-18,3;CL:0002321,2.38e-08,70;CL:0000682,3.05e-08,3;CL:0000213,6.93e-07,1;CL:0002078,6.93e-07,1;CL:0000115,6.93e-07,1;CL:0002262,6.93e-07,1;CL:1000398,6.93e-07,1;CL:0000710,8.98e-07,1;CL:0002077,8.98e-07,1;CL:0005014,8.98e-07,1;CL:0002315,8.98e-07,1;CL:0002490,8.98e-07,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003350!1.42e-08!9;UBERON:0004808!1.42e-08!9;UBERON:0001277!1.42e-08!9;UBERON:0000485!5.22e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000485,5.97e-41,11;UBERON:0003350,5.99e-40,9;UBERON:0004808,5.99e-40,9;UBERON:0001277,5.99e-40,9;UBERON:0001242,1.95e-27,13;UBERON:0001262,1.95e-27,13;UBERON:0004786,1.95e-27,13;UBERON:0000344,1.13e-23,15;UBERON:0004923,1.74e-14,24;UBERON:0003929,3.93e-13,55;UBERON:0000490,1.14e-12,66;UBERON:0000160,5.14e-11,31;UBERON:0005911,3.88e-10,69;UBERON:0005409,6.01e-07,47;UBERON:0002394,6.93e-07,1;UBERON:0001281,6.93e-07,1;UBERON:0000353,6.93e-07,1;UBERON:0003497,6.93e-07,1;UBERON:0003909,6.93e-07,1;UBERON:0003928,6.93e-07,1;UBERON:0003835,6.93e-07,1;UBERON:0003513,6.93e-07,1;UBERON:0001280,6.93e-07,1;UBERON:0004647,6.93e-07,1;UBERON:0002294,6.93e-07,1;UBERON:0001173,6.93e-07,1;UBERON:0004912,6.93e-07,1;UBERON:0005171,6.93e-07,1 | |||
|phase1_expression=0,4.18770489167233,3.18499467572675,3.32710632437513,3.00537437967808,3.69334398206158,0.934450562382103,0.903863264091034,0.84473233291,1.40438715793196,0.68487187290202,0.159544317990673,1.02720437958723,0.611942816932982,0.333109761815663,0,0.699561878128147,0.157731082679119,0.685572168028694,0.42438965179803,0.0850432901510698,0,0,0,0.45881856213434,2.29692785646008,0.430761996159075,1.72376986148711,0,0.252030129759931,0,0.635030673459631,0.61506478758457,0,3.46621943701529,1.66234645358492,5.10423390655923,0.837063261473815,0,0.523523743973798,1.17646297606203,0,0,0,0.101376931219515,0.183546752161682,0.782391344348039,0.218025156380447,0,0,0.279972843250725,0,0.503347818173209,0.725362142011344,0.672187598284928,0.257259436035947,0,0,0,0.528990979272033,0,0,0,0,0.988866362566974,0,0,0.768436610643109,0.207379224616955,0.405017814995072,0.420649922702764,0.285650984403804,0.220868540951614,0.489963196859816,0.0958454710182364,0.919218786610021,0,0,0,0.131886287730194,0.0914876436024097,0.52091337055676,0,0,0.15279824777681,0,0.142371680799103,0,0,0.377857800533928,2.6087803983151,0,1.3599426674155,0,0,0,0.280888840263504,0,0.259786004602869,0,1.97180787687353,0,0,0,0.432982082022428,0.506719730950197,0,0,0.258937883647172,0.148442139064825,0,0,0,0.301445281105245,0.117588707135705,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0.239630249011841,0,0,0.149790639404823,0,0.125654352112864,0,0,0,0,0,0.248813941220186,0,0,0.130120442962704,0,0.360124259610698,0.30140963567143,0.136072998302656,0.384341160854549,0.562210347358373,0,0,0,0,0,0,0,0,0.398068533636986,0.702213187313235,0.51469581422943,0.284163499395593,0,0,0.36012412292203,0,0.196764231747404,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0.164698954724011,0,0.397912944082302,0,0,0,0,0.189667900953082,0.342745537829186,0,0,0.581857461502877,0.0701358198903186,0,0,0,0.123397163921801,0,0,0.196558995113203,0,0.202860121388503,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0.169745085775188,0,0.167506257441816,0,0.195133647857799,0,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0,0.234423373184406,0,0.252470927204373,0.315508219416257,0.780877488593277,0.861693590931196,0.238968797952552,0.668396022247182,0.283076530788832,0,0.292255857911312,0.395287777946524,0,0.141940085208269,0,0.162886959353576,0,0,0.485561272309963,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0.540183282093931,0.646793418913773,0.214337035031592,0,0.178368817602071,0.329098041204242,0,0,0,0,0.16488625294148,0,0.120625849856312,0,0.164140899745061,0,0.18542530201051,0,0.206386867963223,0.185194527369712,0.753473828018764,0.27338845544205,0,0.169978429993855,0.419854356970974,0.138199973804424,0,0,0.406638934253697,0.108005340821801,0.209088296014469,0.218362563746178,0,0.0826534557253359,0,0,0,0,0.149516546043979,0,0,0,0.337912250981556,0.117357238645754,0,0.104859344425711,0.241584120826006,0,0.316011120628178,0,0.102710957164827,0.129920822977795,0.895133478337407,0,0,0.147689527174577,0.100966449948148,0.228620419965,0.201652370273681,0.0974578807397524,0.0962118416403295,0,0.226730383615211,0,0.269141569828427,0.167884616364078,0,0.187682475451182,0,0,0,0,0,0,0.171853182343688,0,0,0.675022500231806,0,0,0,0,0,0.170733605754134,0.243106717068294,0.209613162627982,0.183843508450014,0,0,0.320919209591815,0,0,0,0,0.0640251524048693,0.114870937911227,0,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0,0.0846146078916765,0.182927972872773,0.263069711437843,0,0,0,0.197008964751127,0,0.154936841185966,0.192906610981141,0.249810577937946,0.233931608445408,0,0,0,0 | |phase1_expression=0,4.18770489167233,3.18499467572675,3.32710632437513,3.00537437967808,3.69334398206158,0.934450562382103,0.903863264091034,0.84473233291,1.40438715793196,0.68487187290202,0.159544317990673,1.02720437958723,0.611942816932982,0.333109761815663,0,0.699561878128147,0.157731082679119,0.685572168028694,0.42438965179803,0.0850432901510698,0,0,0,0.45881856213434,2.29692785646008,0.430761996159075,1.72376986148711,0,0.252030129759931,0,0.635030673459631,0.61506478758457,0,3.46621943701529,1.66234645358492,5.10423390655923,0.837063261473815,0,0.523523743973798,1.17646297606203,0,0,0,0.101376931219515,0.183546752161682,0.782391344348039,0.218025156380447,0,0,0.279972843250725,0,0.503347818173209,0.725362142011344,0.672187598284928,0.257259436035947,0,0,0,0.528990979272033,0,0,0,0,0.988866362566974,0,0,0.768436610643109,0.207379224616955,0.405017814995072,0.420649922702764,0.285650984403804,0.220868540951614,0.489963196859816,0.0958454710182364,0.919218786610021,0,0,0,0.131886287730194,0.0914876436024097,0.52091337055676,0,0,0.15279824777681,0,0.142371680799103,0,0,0.377857800533928,2.6087803983151,0,1.3599426674155,0,0,0,0.280888840263504,0,0.259786004602869,0,1.97180787687353,0,0,0,0.432982082022428,0.506719730950197,0,0,0.258937883647172,0.148442139064825,0,0,0,0.301445281105245,0.117588707135705,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0.239630249011841,0,0,0.149790639404823,0,0.125654352112864,0,0,0,0,0,0.248813941220186,0,0,0.130120442962704,0,0.360124259610698,0.30140963567143,0.136072998302656,0.384341160854549,0.562210347358373,0,0,0,0,0,0,0,0,0.398068533636986,0.702213187313235,0.51469581422943,0.284163499395593,0,0,0.36012412292203,0,0.196764231747404,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0.164698954724011,0,0.397912944082302,0,0,0,0,0.189667900953082,0.342745537829186,0,0,0.581857461502877,0.0701358198903186,0,0,0,0.123397163921801,0,0,0.196558995113203,0,0.202860121388503,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0.169745085775188,0,0.167506257441816,0,0.195133647857799,0,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0,0.234423373184406,0,0.252470927204373,0.315508219416257,0.780877488593277,0.861693590931196,0.238968797952552,0.668396022247182,0.283076530788832,0,0.292255857911312,0.395287777946524,0,0.141940085208269,0,0.162886959353576,0,0,0.485561272309963,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0.540183282093931,0.646793418913773,0.214337035031592,0,0.178368817602071,0.329098041204242,0,0,0,0,0.16488625294148,0,0.120625849856312,0,0.164140899745061,0,0.18542530201051,0,0.206386867963223,0.185194527369712,0.753473828018764,0.27338845544205,0,0.169978429993855,0.419854356970974,0.138199973804424,0,0,0.406638934253697,0.108005340821801,0.209088296014469,0.218362563746178,0,0.0826534557253359,0,0,0,0,0.149516546043979,0,0,0,0.337912250981556,0.117357238645754,0,0.104859344425711,0.241584120826006,0,0.316011120628178,0,0.102710957164827,0.129920822977795,0.895133478337407,0,0,0.147689527174577,0.100966449948148,0.228620419965,0.201652370273681,0.0974578807397524,0.0962118416403295,0,0.226730383615211,0,0.269141569828427,0.167884616364078,0,0.187682475451182,0,0,0,0,0,0,0.171853182343688,0,0,0.675022500231806,0,0,0,0,0,0.170733605754134,0.243106717068294,0.209613162627982,0.183843508450014,0,0,0.320919209591815,0,0,0,0,0.0640251524048693,0.114870937911227,0,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0,0.0846146078916765,0.182927972872773,0.263069711437843,0,0,0,0.197008964751127,0,0.154936841185966,0.192906610981141,0.249810577937946,0.233931608445408,0,0,0,0 | ||
|short_description=p@chr1:88423123..88423134,- | |short_description=p@chr1:88423123..88423134,- | ||
}} | }} |
Latest revision as of 03:25, 6 August 2015
Short description: | p@chr1:88423123..88423134, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:88423123..88423134, - |
Coexpression cluster: | MCL_coexpression_mm9:232 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.99e-40 | 9 |
epithelial cell of alimentary canal | 5.99e-40 | 9 |
epithelial cell | 2.25e-36 | 25 |
columnar/cuboidal epithelial cell | 4.71e-29 | 7 |
endodermal cell | 3.83e-27 | 20 |
brush border epithelial cell | 5.41e-24 | 6 |
gut absorptive cell | 5.41e-24 | 6 |
enterocyte | 5.41e-24 | 6 |
endo-epithelial cell | 1.13e-23 | 15 |
intestinal crypt stem cell | 9.33e-18 | 3 |
embryonic cell | 2.38e-08 | 70 |
M cell of gut | 3.05e-08 | 3 |
lining cell | 6.93e-07 | 1 |
meso-epithelial cell | 6.93e-07 | 1 |
endothelial cell | 6.93e-07 | 1 |
endothelial cell of sinusoid | 6.93e-07 | 1 |
endothelial cell of hepatic sinusoid | 6.93e-07 | 1 |
neurecto-epithelial cell | 8.98e-07 | 1 |
ecto-epithelial cell | 8.98e-07 | 1 |
auditory epithelial support cell | 8.98e-07 | 1 |
supporting cell of cochlea | 8.98e-07 | 1 |
organ of Corti supporting cell | 8.98e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
simple columnar epithelium | 5.97e-41 | 11 |
epithelium of mucosa | 5.99e-40 | 9 |
gastrointestinal system epithelium | 5.99e-40 | 9 |
intestinal epithelium | 5.99e-40 | 9 |
intestinal mucosa | 1.95e-27 | 13 |
wall of intestine | 1.95e-27 | 13 |
gastrointestinal system mucosa | 1.95e-27 | 13 |
mucosa | 1.13e-23 | 15 |
organ component layer | 1.74e-14 | 24 |
gut epithelium | 3.93e-13 | 55 |
unilaminar epithelium | 1.14e-12 | 66 |
intestine | 5.14e-11 | 31 |
endo-epithelium | 3.88e-10 | 69 |
gastrointestinal system | 6.01e-07 | 47 |
bile duct | 6.93e-07 | 1 |
hepatic sinusoid | 6.93e-07 | 1 |
parenchyma | 6.93e-07 | 1 |
abdomen blood vessel | 6.93e-07 | 1 |
sinusoid | 6.93e-07 | 1 |
digestive system duct | 6.93e-07 | 1 |
abdominal segment blood vessel | 6.93e-07 | 1 |
trunk blood vessel | 6.93e-07 | 1 |
liver parenchyma | 6.93e-07 | 1 |
liver lobule | 6.93e-07 | 1 |
biliary system | 6.93e-07 | 1 |
biliary tree | 6.93e-07 | 1 |
biliary bud | 6.93e-07 | 1 |
hepatic duct | 6.93e-07 | 1 |