FFCP PHASE1:Mm9::chr2:112552986..112552989,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=131 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:112552986..112552989,+ | |||
|description=CAGE_peak_at_chr2:112552986..112552989,+ | |description=CAGE_peak_at_chr2:112552986..112552989,+ | ||
|id=chr2:112552986..112552989,+ | |id=chr2:112552986..112552989,+ | ||
|ontology_enrichment_celltype=CL:0000239!1.71e-17!6;CL:0000677!1.71e-17!6;CL:0000212!1.71e-17!6;CL:0000584!1.71e-17!6;CL:0000075!4.89e-15!7;CL:0002563!9.36e-12!9;CL:0002251!9.36e-12!9;CL:0000057!9.86e-08!1;CL:0000632!9.86e-08!1;CL:0002076!3.93e-07!15 | |ontology_enrichment_celltype=CL:0000239!1.71e-17!6;CL:0000677!1.71e-17!6;CL:0000212!1.71e-17!6;CL:0000584!1.71e-17!6;CL:0000075!4.89e-15!7;CL:0002563!9.36e-12!9;CL:0002251!9.36e-12!9;CL:0000057!9.86e-08!1;CL:0000632!9.86e-08!1;CL:0002076!3.93e-07!15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.24e-12,6;CL:0000677,1.24e-12,6;CL:0000584,1.24e-12,6;CL:0000075,5.58e-11,7;CL:0002563,9.19e-09,9;CL:0002251,9.19e-09,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!8.76e-34!15;UBERON:0001242!1.28e-23!13;UBERON:0000060!1.28e-23!13;UBERON:0001262!1.28e-23!13;UBERON:0004786!1.28e-23!13;UBERON:0004923!8.17e-21!24;UBERON:0000331!1.11e-19!3;UBERON:0002116!1.11e-19!3;UBERON:0001204!1.11e-19!3;UBERON:0001168!1.11e-19!3;UBERON:0000160!1.77e-16!43;UBERON:0001962!4.53e-14!2;UBERON:0001961!4.53e-14!2;UBERON:0001744!4.53e-14!2;UBERON:0003350!9.36e-12!9;UBERON:0004808!9.36e-12!9;UBERON:0001277!9.36e-12!9;UBERON:0005409!1.11e-11!59;UBERON:0002465!1.10e-09!3;UBERON:0000485!1.17e-09!11;UBERON:0001007!2.79e-08!128;UBERON:0001555!2.79e-08!128;UBERON:0007026!2.79e-08!128;UBERON:0004119!3.95e-08!130;UBERON:0000925!3.95e-08!130;UBERON:0006595!3.95e-08!130;UBERON:0003199!8.50e-08!1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001962,3.18e-35,2;UBERON:0001961,3.18e-35,2;UBERON:0001744,3.18e-35,2;UBERON:0000344,1.68e-29,15;UBERON:0002465,6.68e-24,3;UBERON:0004923,9.72e-19,24;UBERON:0003199,2.59e-18,1;UBERON:0001242,6.03e-13,13;UBERON:0001262,6.03e-13,13;UBERON:0004786,6.03e-13,13;UBERON:0003350,9.19e-09,9;UBERON:0004808,9.19e-09,9;UBERON:0001277,9.19e-09,9;UBERON:0000485,2.41e-07,11;UBERON:0000331,3.18e-07,3;UBERON:0002116,3.18e-07,3;UBERON:0001204,3.18e-07,3;UBERON:0001168,3.18e-07,3 | |||
|phase1_expression=0,0,0.454999239389536,1.81478526784098,2.50447864973174,0,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91990907352088,1.60586496747019,0,0,0,6.08074942260396,0.504060259519861,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0.329397909448022,0.251335208800269,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0.454999239389536,1.81478526784098,2.50447864973174,0,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91990907352088,1.60586496747019,0,0,0,6.08074942260396,0.504060259519861,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0.329397909448022,0.251335208800269,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:112552986..112552989,+ | |short_description=p@chr2:112552986..112552989,+ | ||
}} | }} |
Latest revision as of 09:14, 6 August 2015
Short description: | p@chr2:112552986..112552989, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:112552986..112552989, + |
Coexpression cluster: | MCL_coexpression_mm9:131 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.24e-12 | 6 |
gut absorptive cell | 1.24e-12 | 6 |
enterocyte | 1.24e-12 | 6 |
columnar/cuboidal epithelial cell | 5.58e-11 | 7 |
intestinal epithelial cell | 9.19e-09 | 9 |
epithelial cell of alimentary canal | 9.19e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
gut-associated lymphoid tissue | 3.18e-35 | 2 |
mucosa-associated lymphoid tissue | 3.18e-35 | 2 |
lymphoid tissue | 3.18e-35 | 2 |
mucosa | 1.68e-29 | 15 |
lymphoid system | 6.68e-24 | 3 |
organ component layer | 9.72e-19 | 24 |
egg chamber | 2.59e-18 | 1 |
intestinal mucosa | 6.03e-13 | 13 |
wall of intestine | 6.03e-13 | 13 |
gastrointestinal system mucosa | 6.03e-13 | 13 |
epithelium of mucosa | 9.19e-09 | 9 |
gastrointestinal system epithelium | 9.19e-09 | 9 |
intestinal epithelium | 9.19e-09 | 9 |
simple columnar epithelium | 2.41e-07 | 11 |
ileal mucosa | 3.18e-07 | 3 |
ileum | 3.18e-07 | 3 |
mucosa of small intestine | 3.18e-07 | 3 |
wall of small intestine | 3.18e-07 | 3 |