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FFCP PHASE1:Mm9::chr2:158492333..158492382,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=228852
|EntrezGene=228852
|HGNC=
|HGNC=
|MCL_coexpression_id=7
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_uc012cil.1_5end
|association_with_transcript=0bp_to_uc012cil.1_5end
|cluster_id=chr2:158492333..158492382,+
|description=CAGE_peak_4_at_Ppp1r16b_5end
|description=CAGE_peak_4_at_Ppp1r16b_5end
|id=chr2:158492333..158492382,+
|id=chr2:158492333..158492382,+
|ontology_enrichment_celltype=CL:0000838!2.66e-10!12;CL:0000542!4.05e-10!13;CL:0000051!4.05e-10!13;CL:0000084!1.22e-09!11;CL:0000827!1.22e-09!11;CL:0000791!1.50e-08!9;CL:0000789!1.50e-08!9;CL:0002420!1.50e-08!9;CL:0002419!1.50e-08!9;CL:0000790!1.50e-08!9;CL:0000624!8.25e-08!8
|ontology_enrichment_celltype=CL:0000838!2.66e-10!12;CL:0000542!4.05e-10!13;CL:0000051!4.05e-10!13;CL:0000084!1.22e-09!11;CL:0000827!1.22e-09!11;CL:0000791!1.50e-08!9;CL:0000789!1.50e-08!9;CL:0002420!1.50e-08!9;CL:0002419!1.50e-08!9;CL:0000790!1.50e-08!9;CL:0000624!8.25e-08!8
|ontology_enrichment_celltype_v019_2=CL:0000838,2.78e-28,12;CL:0000084,2.96e-26,11;CL:0000827,2.96e-26,11;CL:0000542,6.87e-26,13;CL:0000051,6.87e-26,13;CL:0000791,6.42e-23,9;CL:0000789,6.42e-23,9;CL:0002420,6.42e-23,9;CL:0002419,6.42e-23,9;CL:0000790,6.42e-23,9;CL:0000624,1.18e-20,8;CL:0002031,3.28e-19,25;CL:0000738,3.91e-19,17;CL:0002087,3.91e-19,17;CL:0000988,2.46e-16,32;CL:0002032,2.46e-16,32;CL:0000037,2.46e-16,32;CL:0000837,2.46e-16,32;CL:0000893,7.79e-16,6;CL:0002489,7.79e-16,6;CL:0000898,7.79e-16,6;CL:0000809,7.79e-16,6;CL:0000810,7.79e-16,6;CL:0000895,7.79e-16,6;CL:0000808,7.79e-16,6;CL:0000894,7.79e-16,6;CL:0000806,7.79e-16,6;CL:0000807,7.79e-16,6;CL:0000805,7.79e-16,6;CL:0002425,7.79e-16,6;CL:0002436,7.79e-16,6;CL:0002427,7.79e-16,6;CL:0002428,7.79e-16,6;CL:0002429,7.79e-16,6;CL:0002433,7.79e-16,6;CL:0002431,7.79e-16,6;CL:0002432,7.79e-16,6;CL:0002320,3.37e-10,46;CL:0000134,3.37e-10,46;CL:0000219,3.85e-08,54
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000065!7.58e-13!41;UBERON:0001004!3.55e-12!42;UBERON:0004177!1.88e-11!29;UBERON:0006562!1.61e-09!24;UBERON:0001557!1.61e-09!24;UBERON:0001042!1.61e-09!24;UBERON:0008814!1.61e-09!24;UBERON:0009145!1.61e-09!24;UBERON:0002370!3.26e-09!23;UBERON:0000974!3.26e-09!23;UBERON:0004807!3.26e-09!23;UBERON:0005058!3.26e-09!23;UBERON:0003351!3.26e-09!23;UBERON:0009113!3.26e-09!23;UBERON:0003295!3.26e-09!23;UBERON:0009722!3.26e-09!23;UBERON:0005562!3.26e-09!23;UBERON:0007690!3.26e-09!23;UBERON:0003408!1.86e-08!24;UBERON:0002193!1.15e-07!48;UBERON:0000072!1.87e-07!27;UBERON:0002390!3.11e-07!45;UBERON:0003061!3.11e-07!45
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.26e-17,23;UBERON:0000974,1.26e-17,23;UBERON:0004807,1.26e-17,23;UBERON:0005058,1.26e-17,23;UBERON:0003351,1.26e-17,23;UBERON:0009113,1.26e-17,23;UBERON:0003295,1.26e-17,23;UBERON:0009722,1.26e-17,23;UBERON:0005562,1.26e-17,23;UBERON:0007690,1.26e-17,23;UBERON:0006562,9.40e-17,24;UBERON:0003408,9.40e-17,24;UBERON:0001557,9.40e-17,24;UBERON:0001042,9.40e-17,24;UBERON:0008814,9.40e-17,24;UBERON:0009145,9.40e-17,24;UBERON:0004177,2.61e-15,29;UBERON:0005057,2.61e-15,29;UBERON:0000065,1.49e-14,41;UBERON:0000072,1.58e-14,27;UBERON:0001004,4.17e-14,42;UBERON:0000077,7.69e-14,35;UBERON:0002193,9.89e-14,48;UBERON:0002405,9.89e-14,48;UBERON:0002390,4.44e-13,45;UBERON:0003061,4.44e-13,45;UBERON:0002384,3.37e-10,46;UBERON:0007811,4.29e-10,36;UBERON:0000153,3.75e-09,43;UBERON:0005911,5.52e-07,69
|phase1_expression=0,0,0,0,0,0.16787927191189,0.233612640595526,5.93967287831251,28.72089931894,29.9602593692152,4.96532107853964,5.10541817570153,5.47842335779858,5.94458736449182,0,0.202475267389826,0,1.89277299214943,1.50825876966313,2.54633791078818,0.17008658030214,1.09220046320974,1.04479915655574,0.47997726838022,0,0.57423196411502,0,0.646413698057667,0,0,0,0,0,0,0,0,0,2.09265815368454,0,1.57057123192139,1.76469446409304,0.683045484958446,2.42755176515577,0,0,0,0,0,0,0,0,0,1.8456086666351,7.97898356212479,4.7053131879945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0.122490799214954,0,0,0,0,0.153606533256243,0,0,0.52091337055676,0,0,0,0.294628585473668,0,0,0.454357159999104,0.226714680320357,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,7.76813650941515,0.445326417194474,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0.376999773989026,0.494389935468748,0.722996784599558,0,0.323533699894818,0.441683036920787,0,0,0,0,0,2.03685711660064,0.599902730993408,0.381210681219194,0.149790639404823,0,0,0,0,0,0.162241263067758,0,0.248813941220186,0,0,0.130120442962704,0,0,0,0,0,0.187403449119458,0.517406741478031,0,0.189106080167819,0.351902248327898,0.219195732427575,0,1.0447564995665,0.205782136407943,0,0,0.51469581422943,0,0,0,0.180062061461015,0.473489471170421,0.196764231747404,0,0,0.268273401399619,0.583826711835847,0,0.164167464079095,0.0810688095458557,0.146199987425332,0,0,0,0,0.660837565967596,0,0.213288250535234,0,0,0,0.22237804384487,0,0,0,0,0.198956472041151,0.38992817423824,0,0,0.398282546508734,0,0.342745537829186,0,0,0,0.140271639780637,0.442655759869801,0.295220295959204,0,0.246794327843601,0,0,0,0,0,0.241177159752417,0,0.287696137450811,0.162135226775035,0,0,0,0.312037673114561,0,0.179397413521912,0,0.739012760666419,0.189491411770485,0.162964976442026,0.848725428875941,0.234690248288502,1.34005005953453,1.6663054862021,1.56106918286239,1.10344600874334,0.8858587585951,0.637819074629948,0.81931657357869,0.863424909329478,0.289298117163023,0,0,0.491764273019036,0.551873492609465,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0.162886959353576,0,0,0,0.604647113929502,0.377210159511796,0,0.307435147943927,0.775284879504663,0.363533729477506,0.356497378384721,0.632073515871632,0,0,0,0,0,0,0.177340233642274,0.178368817602071,0,0,1.40803024838226,0.63549621259146,0,0.16488625294148,0,0.241251699712623,0.119372344003136,0,0.582961673259701,0,1.36696704638282,0.412773735926445,0.740778109478847,0.188368457004691,0.546776910884101,0.915112692826091,3.56954702987096,4.19854356970974,5.2515990045681,0,0,0,0,0,0.218362563746178,0,0.247960367176008,0,0,0,0,0.598066184175915,0.330916980914195,0,0.129159823477731,0,0.234714477291508,0.13020438484395,0.104859344425711,0,0.288030006257865,1.89606672376907,0,0.513554785824136,0.909445760844565,0.537080087002444,0.79472541912506,1.44234539423963,1.03382669022204,0.504832249740738,1.06689529317,1.71404514732629,1.26695244961678,2.11666051608725,2.92192255453922,0.453460767230423,0,0,0,0,0.375364950902364,0.73260649706906,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0,0,0.735374033800057,0,0,0,0.758091635291392,0.25347929989024,0.188626341386076,0.187283014939765,0.192075457214608,0.287177344778066,0,0.231768651889711,0.38581844092741,0.412085900803307,0.147198920134397,0.342869252385415,0.354951612318675,0.476872379894642,0.290692833264657,0.0941093804153306,0.592302255241736,0.182927972872773,0,0,0,0.355905054372522,0,0.409231043169689,0,0.192906610981141,0,0,0.214871054048298,0.191288332068843,0.441182838239031,0.231867835620421
|phase1_expression=0,0,0,0,0,0.16787927191189,0.233612640595526,5.93967287831251,28.72089931894,29.9602593692152,4.96532107853964,5.10541817570153,5.47842335779858,5.94458736449182,0,0.202475267389826,0,1.89277299214943,1.50825876966313,2.54633791078818,0.17008658030214,1.09220046320974,1.04479915655574,0.47997726838022,0,0.57423196411502,0,0.646413698057667,0,0,0,0,0,0,0,0,0,2.09265815368454,0,1.57057123192139,1.76469446409304,0.683045484958446,2.42755176515577,0,0,0,0,0,0,0,0,0,1.8456086666351,7.97898356212479,4.7053131879945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0.122490799214954,0,0,0,0,0.153606533256243,0,0,0.52091337055676,0,0,0,0.294628585473668,0,0,0.454357159999104,0.226714680320357,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,7.76813650941515,0.445326417194474,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0.376999773989026,0.494389935468748,0.722996784599558,0,0.323533699894818,0.441683036920787,0,0,0,0,0,2.03685711660064,0.599902730993408,0.381210681219194,0.149790639404823,0,0,0,0,0,0.162241263067758,0,0.248813941220186,0,0,0.130120442962704,0,0,0,0,0,0.187403449119458,0.517406741478031,0,0.189106080167819,0.351902248327898,0.219195732427575,0,1.0447564995665,0.205782136407943,0,0,0.51469581422943,0,0,0,0.180062061461015,0.473489471170421,0.196764231747404,0,0,0.268273401399619,0.583826711835847,0,0.164167464079095,0.0810688095458557,0.146199987425332,0,0,0,0,0.660837565967596,0,0.213288250535234,0,0,0,0.22237804384487,0,0,0,0,0.198956472041151,0.38992817423824,0,0,0.398282546508734,0,0.342745537829186,0,0,0,0.140271639780637,0.442655759869801,0.295220295959204,0,0.246794327843601,0,0,0,0,0,0.241177159752417,0,0.287696137450811,0.162135226775035,0,0,0,0.312037673114561,0,0.179397413521912,0,0.739012760666419,0.189491411770485,0.162964976442026,0.848725428875941,0.234690248288502,1.34005005953453,1.6663054862021,1.56106918286239,1.10344600874334,0.8858587585951,0.637819074629948,0.81931657357869,0.863424909329478,0.289298117163023,0,0,0.491764273019036,0.551873492609465,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0.162886959353576,0,0,0,0.604647113929502,0.377210159511796,0,0.307435147943927,0.775284879504663,0.363533729477506,0.356497378384721,0.632073515871632,0,0,0,0,0,0,0.177340233642274,0.178368817602071,0,0,1.40803024838226,0.63549621259146,0,0.16488625294148,0,0.241251699712623,0.119372344003136,0,0.582961673259701,0,1.36696704638282,0.412773735926445,0.740778109478847,0.188368457004691,0.546776910884101,0.915112692826091,3.56954702987096,4.19854356970974,5.2515990045681,0,0,0,0,0,0.218362563746178,0,0.247960367176008,0,0,0,0,0.598066184175915,0.330916980914195,0,0.129159823477731,0,0.234714477291508,0.13020438484395,0.104859344425711,0,0.288030006257865,1.89606672376907,0,0.513554785824136,0.909445760844565,0.537080087002444,0.79472541912506,1.44234539423963,1.03382669022204,0.504832249740738,1.06689529317,1.71404514732629,1.26695244961678,2.11666051608725,2.92192255453922,0.453460767230423,0,0,0,0,0.375364950902364,0.73260649706906,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0,0,0.735374033800057,0,0,0,0.758091635291392,0.25347929989024,0.188626341386076,0.187283014939765,0.192075457214608,0.287177344778066,0,0.231768651889711,0.38581844092741,0.412085900803307,0.147198920134397,0.342869252385415,0.354951612318675,0.476872379894642,0.290692833264657,0.0941093804153306,0.592302255241736,0.182927972872773,0,0,0,0.355905054372522,0,0.409231043169689,0,0.192906610981141,0,0,0.214871054048298,0.191288332068843,0.441182838239031,0.231867835620421
|short_description=p4@Ppp1r16b
|short_description=p4@Ppp1r16b
}}
}}

Latest revision as of 01:19, 26 September 2015

Short description:p4@Ppp1r16b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Ppp1r16b_5end
Coexpression cluster:MCL_coexpression_mm9:7
Association with transcript: 0bp_to_uc012cil.1_5end
EntrezGene:Ppp1r16b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Ppp1r16b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E95.94
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E728.72
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F229.96
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E64.97
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F15.11
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E45.48
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E85.94
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.89
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.51
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.55
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.09
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.43
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.85
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I97.98
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.71
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.45
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H97.77
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.04
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A61.34
lung, embryo E18.CNhs10583.1287-20I61.67
lung, neonate N00.CNhs11224.640-42C61.56
lung, neonate N06.CNhs11212.683-20E51.10
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I71.41
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G21.37
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.57
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.20
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D35.25
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B51.90
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.91
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F81.44
thymus, neonate N03.CNhs11137.2104-43C71.03
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D31.07
thymus, neonate N10.CNhs11194.748-24E41.71
thymus, neonate N20.CNhs11186.820-7A21.27
thymus, neonate N25.CNhs11125.1362-25G72.12
thymus, neonate N30.CNhs11132.1393-42G22.92
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
lymphoid lineage restricted progenitor cell2.78e-2812
T cell2.96e-2611
pro-T cell2.96e-2611
lymphocyte6.87e-2613
common lymphoid progenitor6.87e-2613
mature alpha-beta T cell6.42e-239
alpha-beta T cell6.42e-239
immature T cell6.42e-239
mature T cell6.42e-239
immature alpha-beta T cell6.42e-239
CD4-positive, alpha-beta T cell1.18e-208
hematopoietic lineage restricted progenitor cell3.28e-1925
leukocyte3.91e-1917
nongranular leukocyte3.91e-1917
hematopoietic cell2.46e-1632
hematopoietic oligopotent progenitor cell2.46e-1632
hematopoietic stem cell2.46e-1632
hematopoietic multipotent progenitor cell2.46e-1632
thymocyte7.79e-166
double negative thymocyte7.79e-166
naive T cell7.79e-166
double-positive, alpha-beta thymocyte7.79e-166
CD4-positive, alpha-beta thymocyte7.79e-166
naive thymus-derived CD4-positive, alpha-beta T cell7.79e-166
DN4 thymocyte7.79e-166
DN1 thymic pro-T cell7.79e-166
DN2 thymocyte7.79e-166
DN3 thymocyte7.79e-166
immature single positive thymocyte7.79e-166
early T lineage precursor7.79e-166
mature CD4 single-positive thymocyte7.79e-166
resting double-positive thymocyte7.79e-166
double-positive blast7.79e-166
CD69-positive double-positive thymocyte7.79e-166
CD69-positive, CD4-positive single-positive thymocyte7.79e-166
CD4-positive, CD8-intermediate double-positive thymocyte7.79e-166
CD24-positive, CD4 single-positive thymocyte7.79e-166
connective tissue cell3.37e-1046
mesenchymal cell3.37e-1046
motile cell3.85e-0854

Uber anatomy
Ontology termp-valuen
thymus1.26e-1723
neck1.26e-1723
respiratory system epithelium1.26e-1723
hemolymphoid system gland1.26e-1723
pharyngeal epithelium1.26e-1723
thymic region1.26e-1723
pharyngeal gland1.26e-1723
entire pharyngeal arch endoderm1.26e-1723
thymus primordium1.26e-1723
early pharyngeal endoderm1.26e-1723
pharynx9.40e-1724
gland of gut9.40e-1724
upper respiratory tract9.40e-1724
chordate pharynx9.40e-1724
pharyngeal arch system9.40e-1724
pharyngeal region of foregut9.40e-1724
hemopoietic organ2.61e-1529
immune organ2.61e-1529
respiratory tract1.49e-1441
segment of respiratory tract1.58e-1427
respiratory system4.17e-1442
mixed endoderm/mesoderm-derived structure7.69e-1435
hemolymphoid system9.89e-1448
immune system9.89e-1448
hematopoietic system4.44e-1345
blood island4.44e-1345
connective tissue3.37e-1046
craniocervical region4.29e-1036
anterior region of body3.75e-0943
endo-epithelium5.52e-0769
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