FFCP PHASE1:Mm9::chr5:144031637..144031697,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=54201 | |EntrezGene=54201 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=720 | |||
|TSSclassifier=NA | |||
|UniProt=G3XA34,Q6PGE4,O35483 | |UniProt=G3XA34,Q6PGE4,O35483 | ||
|association_with_transcript=3bp_to_ENSMUST00000161448,NM_017467,uc009ajw.2_5end | |association_with_transcript=3bp_to_ENSMUST00000161448,NM_017467,uc009ajw.2_5end | ||
|cluster_id=chr5:144031637..144031697,- | |||
|description=CAGE_peak_1_at_Zfp316_5end | |description=CAGE_peak_1_at_Zfp316_5end | ||
|id=chr5:144031637..144031697,- | |id=chr5:144031637..144031697,- | ||
|ontology_enrichment_celltype=CL:0000540!2.45e-17!33;CL:0000047!2.45e-17!33;CL:0000031!2.45e-17!33;CL:0000404!2.45e-17!33;CL:0000221!7.48e-17!44;CL:0000133!7.48e-17!44;CL:0002319!8.96e-17!43;CL:0000393!1.42e-15!39;CL:0000211!1.42e-15!39;CL:0000055!1.39e-14!50;CL:0000117!1.56e-14!23;CL:0000337!1.56e-14!23;CL:0002321!2.62e-07!70;CL:0000220!2.62e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.44e-17,33;CL:0000047,2.44e-17,33;CL:0000031,2.44e-17,33;CL:0000404,2.44e-17,33;CL:0000221,7.43e-17,44;CL:0000133,7.43e-17,44;CL:0002319,8.90e-17,43;CL:0000393,1.41e-15,39;CL:0000211,1.41e-15,39;CL:0000117,1.55e-14,23;CL:0000337,1.55e-14,23;CL:0002321,2.55e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.01e-34!73;UBERON:0005743!1.01e-34!73;UBERON:0004121!1.27e-33!102;UBERON:0000924!1.27e-33!102;UBERON:0006601!1.27e-33!102;UBERON:0000073!5.93e-33!75;UBERON:0001016!5.93e-33!75;UBERON:0002346!1.19e-29!71;UBERON:0003075!1.19e-29!71;UBERON:0007284!1.19e-29!71;UBERON:0000033!6.20e-29!63;UBERON:0001049!3.10e-26!52;UBERON:0005068!3.10e-26!52;UBERON:0006241!3.10e-26!52;UBERON:0007135!3.10e-26!52;UBERON:0000955!2.59e-25!50;UBERON:0006238!2.59e-25!50;UBERON:0002616!7.92e-25!49;UBERON:0003056!1.44e-24!49;UBERON:0003080!1.34e-20!40;UBERON:0002780!3.45e-20!39;UBERON:0001890!3.45e-20!39;UBERON:0006240!3.45e-20!39;UBERON:0002020!1.14e-18!34;UBERON:0002791!5.37e-16!29;UBERON:0003528!5.37e-16!29;UBERON:0001893!5.37e-16!29;UBERON:0000153!4.80e-14!94;UBERON:0007811!9.35e-14!86;UBERON:0000956!6.65e-12!21;UBERON:0001869!6.65e-12!21;UBERON:0000203!6.65e-12!21;UBERON:0002619!9.42e-10!17;UBERON:0004111!1.02e-09!122;UBERON:0000025!1.61e-09!114;UBERON:0000468!1.70e-07!333;UBERON:0000922!6.13e-07!328 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,9.37e-35,95;UBERON:0000924,9.37e-35,95;UBERON:0006601,9.37e-35,95;UBERON:0001017,9.99e-35,73;UBERON:0001016,5.85e-33,75;UBERON:0002346,1.38e-31,64;UBERON:0003075,1.38e-31,64;UBERON:0007284,1.38e-31,64;UBERON:0010371,1.28e-29,73;UBERON:0000073,8.90e-28,54;UBERON:0001049,3.07e-26,52;UBERON:0005068,3.07e-26,52;UBERON:0006241,3.07e-26,52;UBERON:0007135,3.07e-26,52;UBERON:0003056,1.43e-24,49;UBERON:0010314,3.33e-24,92;UBERON:0000955,1.56e-23,47;UBERON:0006238,1.56e-23,47;UBERON:0002616,4.67e-23,46;UBERON:0003080,1.33e-20,40;UBERON:0002780,3.42e-20,39;UBERON:0001890,3.42e-20,39;UBERON:0006240,3.42e-20,39;UBERON:0002020,1.13e-18,34;UBERON:0003528,5.33e-16,29;UBERON:0002791,5.33e-16,29;UBERON:0001893,5.33e-16,29;UBERON:0000956,6.62e-12,21;UBERON:0001869,6.62e-12,21;UBERON:0000203,6.62e-12,21;UBERON:0002619,9.39e-10,17;UBERON:0004111,1.01e-09,122;UBERON:0000025,1.60e-09,114 | |||
|phase1_expression=11.3705681444404,0.348975407639361,0.454999239389536,0.30246421130683,0,4.02910252588535,3.03696432774183,4.13194635013044,0,0,0,0.638177271962691,1.54080656938085,0.34968160967599,5.66286595086627,5.06188168474565,3.49780939064073,8.20201629931418,6.85572168028694,3.39511721438424,10.0351082378262,3.97163804803541,3.6567970479451,3.19984845586813,2.75291137280604,1.14846392823004,0.86152399231815,1.07735616342945,1.52018735565099,2.77233142735924,1.77384408524244,9.52546010189447,8.61090702618398,0,5.48818077527422,4.48833542467929,4.28755648150975,0,0,0,0,0.683045484958446,0.485510353031154,16.1147927008739,14.2941473019516,10.6457116253775,25.8189143634853,14.6076854774899,13.8402295122717,14.5822424305713,8.53917171914711,7.18762821824858,3.35565212115473,0.725362142011344,1.00828139742739,3.8588915405392,6.30373567865265,6.70373719960675,46.1281530759883,42.8482693210347,48.1711866664696,10.5041804941431,8.89294796111139,13.498495759221,7.9109309005358,9.9467216092454,15.579205746957,19.9793518767208,31.1068836925433,40.9067993145023,36.3862183137891,18.2816630018434,20.5407743085001,34.2974237801871,36.4212789869298,38.6071890376209,23.1243350098716,20.1745994174597,21.3513081226178,44.8413378282659,46.0182847320121,50.007683573449,15.9134309430787,19.1339287410771,20.6277634498694,20.9186295686304,20.5015220350708,34.2974980318553,5.37655972665607,4.30757892608677,9.56552812715537,1.72084775396277,1.3599426674155,3.2382191498269,5.19821133958135,2.68816132258401,6.17955448579708,5.79463096765396,7.01422212427746,7.42013106471715,11.1266301623578,11.5493829672886,43.3168907501298,56.8853362522665,4.11332977921307,4.30711771307668,3.53867111510348,3.9964357901671,4.14300613835475,8.60964406575984,7.45986905094384,9.74289530598852,9.91646638201052,9.04335843315735,9.64227398512779,7.53999547978053,4.44950941921873,5.92857363371638,2.65383165584962,7.92657564742305,5.52103796150984,4.84875253135222,3.72783522436244,16.6885054296582,18.6407569063975,2.81002760729451,2.51611761462433,0.599902730993408,2.28726408731516,16.926342252745,13.2675174817402,26.5130682958144,15.4703644971126,16.8772201838018,15.3763152974074,16.2241263067758,12.7299204812895,10.8234064430781,12.1306924048164,14.9413717679397,18.6072233436666,14.9436367881757,15.1252189036493,17.4817588689429,22.9283002139975,17.8078071195941,20.7080811277001,20.1788629176432,10.3472636607764,13.4265316919152,14.6039433056078,10.0830036916684,13.6243152120543,9.05455632957633,7.40815691068596,16.5198441459349,1.40442637462647,1.54408744268829,1.42081749697796,7.87077935634907,8.20841209933837,9.18316513451176,7.81257627431194,9.24791889212798,8.63895832169318,8.37122201101468,10.9992094573844,8.64063533517054,7.73431294593358,6.07419617092652,8.431156192769,9.21059920779594,8.56245449635098,9.5286557319864,15.7717461423095,27.8871499547861,1.65209391491899,0.793351699990633,14.5036010363959,12.7730169523241,7.08771037271513,6.05050573870028,6.67134131534611,5.70676878337677,2.84717436926707,4.28217282282428,5.52937459360593,7.75930240960488,6.62877896205008,0.898819408654221,2.80979464837102,3.18626037206988,8.15571974098251,12.4530878744604,10.1436962105772,12.0154283428735,11.8311017172252,11.9230893813542,11.6355228308633,9.44704947069454,7.69293766422737,8.14421281883883,5.33614728756868,2.66952169145751,2.35870794135844,1.12431056192427,1.82574109249653,1.92941727801933,3.31013607315846,3.45235364940973,3.72911021582581,4.11842119782122,4.31304619582064,7.07067800570156,8.42501717409313,9.34541848404313,5.02312757861354,8.20153986317724,6.46636165583116,7.20067364727842,6.51859905768104,10.0149600607361,12.6732734075791,7.20276906999808,9.28370199455454,8.19561321002755,8.19702749352193,7.0868700687608,8.45110273884682,8.68475567993411,7.59813920209941,9.11289069063523,0,5.98296252200581,8.85175691434265,5.79467167239938,13.8073507389501,17.9333880486071,8.6885521049638,7.57412781613119,14.5133780931478,16.0079885161622,15.5104846367615,17.2057534525837,15.81870585985,18.9661275628518,16.1924280669958,11.9824901743638,19.3691011193797,18.315315036043,10.3616262202036,21.0117412327361,13.3567306669932,10.2281476242972,10.619611067197,14.8096188054539,9.97667737983678,6.22396763194464,7.08724542913855,10.4527950300935,9.04499026088774,10.1789444253702,7.48644494607915,4.74055136903724,8.4334886859999,6.18813259489121,16.000661470428,19.0864759673189,22.8964870295475,16.7182887324642,17.7340233642274,17.3017753074008,15.9612549984057,25.2705907765117,1.40803024838226,2.75381692122966,7.71849393192367,12.2015827176695,6.45857706783622,7.05661221659424,9.07229814423837,11.6540038818993,4.66369338607761,14.6485988588303,4.44264290074417,8.66824845445534,4.44466865687308,3.57900068308913,5.87785179200408,4.34678529092393,5.26933132980952,6.01791244991729,3.17859939750175,3.81868247206045,10.7554237817586,8.3360981522008,10.9085394230019,11.7089445768102,7.86105229486239,8.22672512947406,9.91841468704031,5.23511883968059,5.57344385154709,10.5627683224777,2.25477175473676,12.7089064137382,11.0857188606255,8.5558522871381,15.37001899385,14.1923145412254,13.9655113988447,13.4110516389269,10.6956531314225,4.1069300540421,6.04863013141517,2.52808896502543,9.73081033392788,8.31958753035101,5.97635785697857,2.32734704367726,2.18549490259391,2.52410443991935,3.2491695978407,1.81739609906666,1.67654974641,1.81487133246313,1.65678397257579,1.82802499116626,2.22066114144981,5.8949899739955,2.21985953374065,0.358855426437903,2.51826924546118,11.5913756419314,5.63047426353546,7.3260649706906,7.07415650960917,10.0314420807073,25.413832917768,21.6352861158373,18.9055519435001,21.997207339992,18.4972280338073,33.2373314851468,20.925697507186,21.6154177547626,29.0011141749891,23.2992140288319,15.9832515279632,11.9707462020309,16.2196925466427,9.48116196566347,10.0614318061432,9.00833191405069,10.2233494788743,8.65347240403356,9.62757628775446,9.34979683526051,7.09742039692671,8.86543804514558,8.89594320963883,7.74704344098918,7.46661096422972,6.19181798667996,8.80720877180902,7.33055037762079,9.47797571847605,9.27353196846703,9.60033906679163,10.4710725634009,8.82213902805088,10.0289027476307,11.5754537910857,9.13837765230106,11.1586063452391,8.94437018888666,8.96307151382688,11.2228454331548,10.0839765405548,12.5100692616966,10.2307760792422,9.14127362997199,9.83823716003821,20.4844673909116,5.6143586026898,8.37997110788363,5.35607329792761,8.82365676478062,3.47801753430632 | |phase1_expression=11.3705681444404,0.348975407639361,0.454999239389536,0.30246421130683,0,4.02910252588535,3.03696432774183,4.13194635013044,0,0,0,0.638177271962691,1.54080656938085,0.34968160967599,5.66286595086627,5.06188168474565,3.49780939064073,8.20201629931418,6.85572168028694,3.39511721438424,10.0351082378262,3.97163804803541,3.6567970479451,3.19984845586813,2.75291137280604,1.14846392823004,0.86152399231815,1.07735616342945,1.52018735565099,2.77233142735924,1.77384408524244,9.52546010189447,8.61090702618398,0,5.48818077527422,4.48833542467929,4.28755648150975,0,0,0,0,0.683045484958446,0.485510353031154,16.1147927008739,14.2941473019516,10.6457116253775,25.8189143634853,14.6076854774899,13.8402295122717,14.5822424305713,8.53917171914711,7.18762821824858,3.35565212115473,0.725362142011344,1.00828139742739,3.8588915405392,6.30373567865265,6.70373719960675,46.1281530759883,42.8482693210347,48.1711866664696,10.5041804941431,8.89294796111139,13.498495759221,7.9109309005358,9.9467216092454,15.579205746957,19.9793518767208,31.1068836925433,40.9067993145023,36.3862183137891,18.2816630018434,20.5407743085001,34.2974237801871,36.4212789869298,38.6071890376209,23.1243350098716,20.1745994174597,21.3513081226178,44.8413378282659,46.0182847320121,50.007683573449,15.9134309430787,19.1339287410771,20.6277634498694,20.9186295686304,20.5015220350708,34.2974980318553,5.37655972665607,4.30757892608677,9.56552812715537,1.72084775396277,1.3599426674155,3.2382191498269,5.19821133958135,2.68816132258401,6.17955448579708,5.79463096765396,7.01422212427746,7.42013106471715,11.1266301623578,11.5493829672886,43.3168907501298,56.8853362522665,4.11332977921307,4.30711771307668,3.53867111510348,3.9964357901671,4.14300613835475,8.60964406575984,7.45986905094384,9.74289530598852,9.91646638201052,9.04335843315735,9.64227398512779,7.53999547978053,4.44950941921873,5.92857363371638,2.65383165584962,7.92657564742305,5.52103796150984,4.84875253135222,3.72783522436244,16.6885054296582,18.6407569063975,2.81002760729451,2.51611761462433,0.599902730993408,2.28726408731516,16.926342252745,13.2675174817402,26.5130682958144,15.4703644971126,16.8772201838018,15.3763152974074,16.2241263067758,12.7299204812895,10.8234064430781,12.1306924048164,14.9413717679397,18.6072233436666,14.9436367881757,15.1252189036493,17.4817588689429,22.9283002139975,17.8078071195941,20.7080811277001,20.1788629176432,10.3472636607764,13.4265316919152,14.6039433056078,10.0830036916684,13.6243152120543,9.05455632957633,7.40815691068596,16.5198441459349,1.40442637462647,1.54408744268829,1.42081749697796,7.87077935634907,8.20841209933837,9.18316513451176,7.81257627431194,9.24791889212798,8.63895832169318,8.37122201101468,10.9992094573844,8.64063533517054,7.73431294593358,6.07419617092652,8.431156192769,9.21059920779594,8.56245449635098,9.5286557319864,15.7717461423095,27.8871499547861,1.65209391491899,0.793351699990633,14.5036010363959,12.7730169523241,7.08771037271513,6.05050573870028,6.67134131534611,5.70676878337677,2.84717436926707,4.28217282282428,5.52937459360593,7.75930240960488,6.62877896205008,0.898819408654221,2.80979464837102,3.18626037206988,8.15571974098251,12.4530878744604,10.1436962105772,12.0154283428735,11.8311017172252,11.9230893813542,11.6355228308633,9.44704947069454,7.69293766422737,8.14421281883883,5.33614728756868,2.66952169145751,2.35870794135844,1.12431056192427,1.82574109249653,1.92941727801933,3.31013607315846,3.45235364940973,3.72911021582581,4.11842119782122,4.31304619582064,7.07067800570156,8.42501717409313,9.34541848404313,5.02312757861354,8.20153986317724,6.46636165583116,7.20067364727842,6.51859905768104,10.0149600607361,12.6732734075791,7.20276906999808,9.28370199455454,8.19561321002755,8.19702749352193,7.0868700687608,8.45110273884682,8.68475567993411,7.59813920209941,9.11289069063523,0,5.98296252200581,8.85175691434265,5.79467167239938,13.8073507389501,17.9333880486071,8.6885521049638,7.57412781613119,14.5133780931478,16.0079885161622,15.5104846367615,17.2057534525837,15.81870585985,18.9661275628518,16.1924280669958,11.9824901743638,19.3691011193797,18.315315036043,10.3616262202036,21.0117412327361,13.3567306669932,10.2281476242972,10.619611067197,14.8096188054539,9.97667737983678,6.22396763194464,7.08724542913855,10.4527950300935,9.04499026088774,10.1789444253702,7.48644494607915,4.74055136903724,8.4334886859999,6.18813259489121,16.000661470428,19.0864759673189,22.8964870295475,16.7182887324642,17.7340233642274,17.3017753074008,15.9612549984057,25.2705907765117,1.40803024838226,2.75381692122966,7.71849393192367,12.2015827176695,6.45857706783622,7.05661221659424,9.07229814423837,11.6540038818993,4.66369338607761,14.6485988588303,4.44264290074417,8.66824845445534,4.44466865687308,3.57900068308913,5.87785179200408,4.34678529092393,5.26933132980952,6.01791244991729,3.17859939750175,3.81868247206045,10.7554237817586,8.3360981522008,10.9085394230019,11.7089445768102,7.86105229486239,8.22672512947406,9.91841468704031,5.23511883968059,5.57344385154709,10.5627683224777,2.25477175473676,12.7089064137382,11.0857188606255,8.5558522871381,15.37001899385,14.1923145412254,13.9655113988447,13.4110516389269,10.6956531314225,4.1069300540421,6.04863013141517,2.52808896502543,9.73081033392788,8.31958753035101,5.97635785697857,2.32734704367726,2.18549490259391,2.52410443991935,3.2491695978407,1.81739609906666,1.67654974641,1.81487133246313,1.65678397257579,1.82802499116626,2.22066114144981,5.8949899739955,2.21985953374065,0.358855426437903,2.51826924546118,11.5913756419314,5.63047426353546,7.3260649706906,7.07415650960917,10.0314420807073,25.413832917768,21.6352861158373,18.9055519435001,21.997207339992,18.4972280338073,33.2373314851468,20.925697507186,21.6154177547626,29.0011141749891,23.2992140288319,15.9832515279632,11.9707462020309,16.2196925466427,9.48116196566347,10.0614318061432,9.00833191405069,10.2233494788743,8.65347240403356,9.62757628775446,9.34979683526051,7.09742039692671,8.86543804514558,8.89594320963883,7.74704344098918,7.46661096422972,6.19181798667996,8.80720877180902,7.33055037762079,9.47797571847605,9.27353196846703,9.60033906679163,10.4710725634009,8.82213902805088,10.0289027476307,11.5754537910857,9.13837765230106,11.1586063452391,8.94437018888666,8.96307151382688,11.2228454331548,10.0839765405548,12.5100692616966,10.2307760792422,9.14127362997199,9.83823716003821,20.4844673909116,5.6143586026898,8.37997110788363,5.35607329792761,8.82365676478062,3.47801753430632 | ||
|short_description=p1@Zfp316 | |short_description=p1@Zfp316 | ||
}} | }} |
Latest revision as of 16:55, 25 September 2015
Short description: | p1@Zfp316 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Zfp316_5end |
Coexpression cluster: | MCL_coexpression_mm9:720 |
Association with transcript: | 3bp_to_ENSMUST00000161448, NM_017467, uc009ajw.2_5end |
EntrezGene: | Zfp316 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.44e-17 | 33 |
neuronal stem cell | 2.44e-17 | 33 |
neuroblast | 2.44e-17 | 33 |
electrically signaling cell | 2.44e-17 | 33 |
ectodermal cell | 7.43e-17 | 44 |
neurectodermal cell | 7.43e-17 | 44 |
neural cell | 8.90e-17 | 43 |
electrically responsive cell | 1.41e-15 | 39 |
electrically active cell | 1.41e-15 | 39 |
CNS neuron (sensu Vertebrata) | 1.55e-14 | 23 |
neuroblast (sensu Vertebrata) | 1.55e-14 | 23 |
embryonic cell | 2.55e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 9.37e-35 | 95 |
ectoderm | 9.37e-35 | 95 |
presumptive ectoderm | 9.37e-35 | 95 |
central nervous system | 9.99e-35 | 73 |
nervous system | 5.85e-33 | 75 |
neurectoderm | 1.38e-31 | 64 |
neural plate | 1.38e-31 | 64 |
presumptive neural plate | 1.38e-31 | 64 |
ecto-epithelium | 1.28e-29 | 73 |
regional part of nervous system | 8.90e-28 | 54 |
neural tube | 3.07e-26 | 52 |
neural rod | 3.07e-26 | 52 |
future spinal cord | 3.07e-26 | 52 |
neural keel | 3.07e-26 | 52 |
pre-chordal neural plate | 1.43e-24 | 49 |
structure with developmental contribution from neural crest | 3.33e-24 | 92 |
brain | 1.56e-23 | 47 |
future brain | 1.56e-23 | 47 |
regional part of brain | 4.67e-23 | 46 |
anterior neural tube | 1.33e-20 | 40 |
regional part of forebrain | 3.42e-20 | 39 |
forebrain | 3.42e-20 | 39 |
future forebrain | 3.42e-20 | 39 |
gray matter | 1.13e-18 | 34 |
brain grey matter | 5.33e-16 | 29 |
regional part of telencephalon | 5.33e-16 | 29 |
telencephalon | 5.33e-16 | 29 |
cerebral cortex | 6.62e-12 | 21 |
cerebral hemisphere | 6.62e-12 | 21 |
pallium | 6.62e-12 | 21 |
regional part of cerebral cortex | 9.39e-10 | 17 |
anatomical conduit | 1.01e-09 | 122 |
tube | 1.60e-09 | 114 |