FFCP PHASE1:Mm9::chr2:71367979..71367993,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13390 | |EntrezGene=13390 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=184 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-10bp_to_ENSMUST00000145088_5end | |association_with_transcript=-10bp_to_ENSMUST00000145088_5end | ||
|cluster_id=chr2:71367979..71367993,+ | |||
|description=CAGE_peak_7_at_Dlx1_5end | |description=CAGE_peak_7_at_Dlx1_5end | ||
|id=chr2:71367979..71367993,+ | |id=chr2:71367979..71367993,+ | ||
|ontology_enrichment_celltype=CL:0000221!2.15e-10!44;CL:0000133!2.15e-10!44;CL:0002319!1.53e-09!43;CL:0002609!4.27e-09!6;CL:0000540!5.82e-09!33;CL:0000047!5.82e-09!33;CL:0000031!5.82e-09!33;CL:0000404!5.82e-09!33;CL:0002608!1.15e-07!3;CL:0000055!1.28e-07!50;CL:0002613!4.27e-07!3;CL:0000393!4.56e-07!39;CL:0000211!4.56e-07!39 | |ontology_enrichment_celltype=CL:0000221!2.15e-10!44;CL:0000133!2.15e-10!44;CL:0002319!1.53e-09!43;CL:0002609!4.27e-09!6;CL:0000540!5.82e-09!33;CL:0000047!5.82e-09!33;CL:0000031!5.82e-09!33;CL:0000404!5.82e-09!33;CL:0002608!1.15e-07!3;CL:0000055!1.28e-07!50;CL:0002613!4.27e-07!3;CL:0000393!4.56e-07!39;CL:0000211!4.56e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0002608,1.16e-30,3;CL:0002609,1.02e-15,6;CL:0002613,1.04e-13,3;CL:0000117,7.14e-11,23;CL:0000337,7.14e-11,23;CL:0000540,1.07e-10,33;CL:0000047,1.07e-10,33;CL:0000031,1.07e-10,33;CL:0000404,1.07e-10,33;CL:0000393,4.83e-09,39;CL:0000211,4.83e-09,39;CL:0002319,3.42e-08,43;CL:0000221,5.28e-08,44;CL:0000133,5.28e-08,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.57e-15!75;UBERON:0001016!3.57e-15!75;UBERON:0000033!1.18e-14!63;UBERON:0001017!1.29e-14!73;UBERON:0005743!1.29e-14!73;UBERON:0003056!3.32e-14!49;UBERON:0002780!4.66e-14!39;UBERON:0001890!4.66e-14!39;UBERON:0006240!4.66e-14!39;UBERON:0004121!5.51e-14!102;UBERON:0000924!5.51e-14!102;UBERON:0006601!5.51e-14!102;UBERON:0003080!1.40e-13!40;UBERON:0000955!1.28e-12!50;UBERON:0006238!1.28e-12!50;UBERON:0002616!1.37e-11!49;UBERON:0001049!1.27e-10!52;UBERON:0005068!1.27e-10!52;UBERON:0006241!1.27e-10!52;UBERON:0007135!1.27e-10!52;UBERON:0002346!3.49e-10!71;UBERON:0003075!3.49e-10!71;UBERON:0007284!3.49e-10!71;UBERON:0002791!2.28e-09!29;UBERON:0003528!2.28e-09!29;UBERON:0001893!2.28e-09!29;UBERON:0007811!5.62e-09!86;UBERON:0000153!1.12e-07!94;UBERON:0002020!1.59e-07!34;UBERON:0001954!2.19e-07!7;UBERON:0003022!2.19e-07!7;UBERON:0002421!2.19e-07!7;UBERON:0000349!2.19e-07!7;UBERON:0002600!2.19e-07!7;UBERON:0000369!3.19e-07!5;UBERON:0002435!3.19e-07!5;UBERON:0000204!3.19e-07!5;UBERON:0010082!3.19e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,5.17e-18,5;UBERON:0002435,5.17e-18,5;UBERON:0000204,5.17e-18,5;UBERON:0010082,5.17e-18,5;UBERON:0001954,1.43e-13,7;UBERON:0003022,1.43e-13,7;UBERON:0002421,1.43e-13,7;UBERON:0000349,1.43e-13,7;UBERON:0002600,1.43e-13,7;UBERON:0003528,3.23e-12,29;UBERON:0002791,3.23e-12,29;UBERON:0001893,3.23e-12,29;UBERON:0002420,1.60e-11,8;UBERON:0007245,1.60e-11,8;UBERON:0010009,1.60e-11,8;UBERON:0010011,1.60e-11,8;UBERON:0000454,1.60e-11,8;UBERON:0002020,2.04e-10,34;UBERON:0002780,4.51e-09,39;UBERON:0001890,4.51e-09,39;UBERON:0006240,4.51e-09,39;UBERON:0003080,7.65e-09,40;UBERON:0002616,1.12e-07,46;UBERON:0000955,1.65e-07,47;UBERON:0006238,1.65e-07,47;UBERON:0003056,3.38e-07,49;UBERON:0001049,8.97e-07,52;UBERON:0005068,8.97e-07,52;UBERON:0006241,8.97e-07,52;UBERON:0007135,8.97e-07,52 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872100625521786,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.768436610643109,0.622137673850866,0.540023753326763,0,0,0,11.2691535277758,14.4726661237537,8.27296907949019,0,0,0,1.58263545276233,0.548925861614458,1.04182674111352,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1361239859187,0,0,0.20778804455956,0,0,0,0,0,0.260240885925407,0.459804208866946,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390438744296638,0,0.238968797952552,0.222798674082394,0.566153061577665,1.21443210502468,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720244376125241,0.646793418913773,0.214337035031592,0.177340233642274,0.178368817602071,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0,0.685082519770642,0,0,0,0,0,1.14166082342594,1.19707462020309,0,0.486213434136588,0.209613162627982,0,0,0,0,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.0640251524048693,0.229741875822453,0,0,0,0,0,0,0,0,0,0.282328141245992,0,0,0.263069711437843,0,0,0,0,0,0,0.578719832943424,0.749431733813838,0,0,0,0,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872100625521786,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.768436610643109,0.622137673850866,0.540023753326763,0,0,0,11.2691535277758,14.4726661237537,8.27296907949019,0,0,0,1.58263545276233,0.548925861614458,1.04182674111352,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1361239859187,0,0,0.20778804455956,0,0,0,0,0,0.260240885925407,0.459804208866946,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390438744296638,0,0.238968797952552,0.222798674082394,0.566153061577665,1.21443210502468,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720244376125241,0.646793418913773,0.214337035031592,0.177340233642274,0.178368817602071,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0,0.685082519770642,0,0,0,0,0,1.14166082342594,1.19707462020309,0,0.486213434136588,0.209613162627982,0,0,0,0,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.0640251524048693,0.229741875822453,0,0,0,0,0,0,0,0,0,0.282328141245992,0,0,0.263069711437843,0,0,0,0,0,0,0.578719832943424,0.749431733813838,0,0,0,0,0 | ||
|short_description=p7@Dlx1 | |short_description=p7@Dlx1 | ||
}} | }} |
Latest revision as of 22:26, 26 September 2015
Short description: | p7@Dlx1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Dlx1_5end |
Coexpression cluster: | MCL_coexpression_mm9:184 |
Association with transcript: | -10bp_to_ENSMUST00000145088_5end |
EntrezGene: | Dlx1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hippocampal neuron | 1.16e-30 | 3 |
neuron of cerebral cortex | 1.02e-15 | 6 |
striatum neuron | 1.04e-13 | 3 |
CNS neuron (sensu Vertebrata) | 7.14e-11 | 23 |
neuroblast (sensu Vertebrata) | 7.14e-11 | 23 |
neuron | 1.07e-10 | 33 |
neuronal stem cell | 1.07e-10 | 33 |
neuroblast | 1.07e-10 | 33 |
electrically signaling cell | 1.07e-10 | 33 |
electrically responsive cell | 4.83e-09 | 39 |
electrically active cell | 4.83e-09 | 39 |
neural cell | 3.42e-08 | 43 |
ectodermal cell | 5.28e-08 | 44 |
neurectodermal cell | 5.28e-08 | 44 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 5.17e-18 | 5 |
striatum | 5.17e-18 | 5 |
ventral part of telencephalon | 5.17e-18 | 5 |
future corpus striatum | 5.17e-18 | 5 |
Ammon's horn | 1.43e-13 | 7 |
lobe parts of cerebral cortex | 1.43e-13 | 7 |
hippocampal formation | 1.43e-13 | 7 |
limbic system | 1.43e-13 | 7 |
limbic lobe | 1.43e-13 | 7 |
brain grey matter | 3.23e-12 | 29 |
regional part of telencephalon | 3.23e-12 | 29 |
telencephalon | 3.23e-12 | 29 |
basal ganglion | 1.60e-11 | 8 |
nuclear complex of neuraxis | 1.60e-11 | 8 |
aggregate regional part of brain | 1.60e-11 | 8 |
collection of basal ganglia | 1.60e-11 | 8 |
cerebral subcortex | 1.60e-11 | 8 |
gray matter | 2.04e-10 | 34 |
regional part of forebrain | 4.51e-09 | 39 |
forebrain | 4.51e-09 | 39 |
future forebrain | 4.51e-09 | 39 |
anterior neural tube | 7.65e-09 | 40 |
regional part of brain | 1.12e-07 | 46 |
brain | 1.65e-07 | 47 |
future brain | 1.65e-07 | 47 |
pre-chordal neural plate | 3.38e-07 | 49 |
neural tube | 8.97e-07 | 52 |
neural rod | 8.97e-07 | 52 |
future spinal cord | 8.97e-07 | 52 |
neural keel | 8.97e-07 | 52 |