Personal tools

FFCP PHASE1:Mm9::chr3:94176733..94176794,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=19885
|EntrezGene=19885
|HGNC=
|HGNC=
|MCL_coexpression_id=810
|TSSclassifier=NA
|UniProt=P51450,Q3TVH3
|UniProt=P51450,Q3TVH3
|association_with_transcript=0bp_to_NM_011281,uc008qfy.2_5end
|association_with_transcript=0bp_to_NM_011281,uc008qfy.2_5end
|cluster_id=chr3:94176733..94176794,+
|description=CAGE_peak_1_at_Rorc_5end
|description=CAGE_peak_1_at_Rorc_5end
|id=chr3:94176733..94176794,+
|id=chr3:94176733..94176794,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000160!2.09e-15!43;UBERON:0005409!1.28e-11!59;UBERON:0001007!7.88e-10!128;UBERON:0001555!7.88e-10!128;UBERON:0007026!7.88e-10!128;UBERON:0004119!2.70e-09!130;UBERON:0000925!2.70e-09!130;UBERON:0006595!2.70e-09!130;UBERON:0004921!3.27e-09!126;UBERON:0004185!3.27e-09!126;UBERON:0000481!7.05e-09!230;UBERON:0000344!4.95e-08!15;UBERON:0000466!1.64e-07!79;UBERON:0005177!2.31e-07!85;UBERON:0001242!2.39e-07!13;UBERON:0000060!2.39e-07!13;UBERON:0001262!2.39e-07!13;UBERON:0004786!2.39e-07!13;UBERON:0002365!3.09e-07!25;UBERON:0002330!3.09e-07!25
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.06e-12,31;UBERON:0005177,4.60e-09,79;UBERON:0000344,3.35e-08,15;UBERON:0005409,3.76e-08,47;UBERON:0001242,1.68e-07,13;UBERON:0001262,1.68e-07,13;UBERON:0004786,1.68e-07,13;UBERON:0002365,3.66e-07,25;UBERON:0002330,3.66e-07,25
|phase1_expression=6.56610273129655,139.590163055744,150.604748237936,109.189580281766,111.198852048089,58.0862280815139,53.0300694151843,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,19.3048268642928,0,0,31.6784997130945,34.8702107222098,83.2636347966779,69.352681381611,68.0889095287409,38.3847307301875,45.1133932270276,14.1907526819395,0,0,0,17.6199488048278,43.553477083925,22.8669679013853,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.367093504323363,0.782391344348039,7.19483016055474,8.78744730937887,5.8328969722285,1.81982348112971,2.87505128729943,0,0,0,0,0.85960031981627,1.54701627683233,0,0,0,0,0,0,0,0,1.79760066311043,2.68952813725088,0.518448061542388,0.135005938331691,0.630974884054146,0.856952953211411,0.441737081903227,0,0.191690942036473,0,1.10115880999389,0.766124028511126,0.768032666281217,0.527545150920775,0.548925861614458,0,5.58365998002762,1.68828783009504,4.12555268997387,0.294628585473668,0.427115042397309,0.186399445825301,0.151452386666368,0,9.27566363845369,82.6006921902131,65.9572193696518,75.5584468292944,68.2265238320053,177.418647290545,41.7119927791303,0,0,0,14.2251853974447,0,0,0,6.061749148314,5.82727690592727,7.07734223020697,101.395285190525,0.258937883647172,24.9382793628906,2.60227990149204,4.26251669636998,6.45723392316964,5.72746034099966,9.17191915658498,15.3313241422204,5.19109432242185,33.1132527346598,10.6153266233985,18.4414208940046,11.2629174414801,11.1521308221101,14.9113408974498,21.0802173848314,19.2690970268379,38.3185582812887,0,0,0,4.04434726393021,5.03250663100489,0.251308704225729,1.04294592115366,0.767146371990992,3.94797284663164,1.29793010454206,12.0170449343373,12.1918831197891,25.5249986018011,34.7229062212682,0.910843100738926,2.06911893990126,1.98068342785884,3.61691562805716,7.21186891004075,5.25266253167884,8.62055865949505,13.9699820199068,0.215567992932842,0.567318240503458,1.05570674498369,1.09597866213787,3.33656699070717,4.52727816478817,11.3180175024369,4.77682240364384,0,0,0,0.207125772535502,2.11073453982987,3.78130329068131,4.97163944728941,8.46086196513836,11.2614992407786,13.7195027402741,12.0723030629829,32.5775305204403,22.5446994381468,25.6101243963389,35.427069771539,38.7429966677131,29.4197154490008,54.4878060167109,4.6263788684108,1.23485534855141,77.9788327841763,71.930554132484,0.639864751605702,1.39342003116263,3.22168653305233,11.8993279527772,24.9063409106255,34.2406127002606,46.0293189698176,78.2320034939052,96.2613849705032,117.782231448361,113.07917052909,52.1315257019448,41.0662294761919,67.9071741797392,4.1726938209678,6.62641373136427,10.1436962105772,13.8482902934814,17.8436288194216,29.1765010743725,33.0727089159866,45.9067560216563,23.863806631889,63.5495394197273,209.295554723527,1.16791574001266,0.786235980452812,2.69834534861824,3.04290182082754,3.85883455603867,5.60176873919124,20.1387296215567,17.8348749452539,36.7912293672029,53.1942364151212,68.8460753186731,79.8816443173275,70.2169280692971,65.300658521976,124.470428511749,10.9004382198297,1.13694847062291,4.23708938749267,5.09235257325564,10.0916806764056,13.4005005953453,18.091316707337,19.7084984336377,10.719189799221,10.4088404134924,11.4807433433391,12.6174752331118,8.11619414769709,18.5150794984335,0,0,31.4729134732183,56.8429697387749,9.79358598925531,5.86058432961016,0,47.7170052416265,1.57754109708128,1.17131623288992,1.93881057959519,1.67278158566786,0.891194696329576,1.69845918473299,2.42886421004937,4.67609372658099,2.37172666767914,0.642642632843614,10.2196861349953,17.6284947630583,13.1938437076397,19.7964147567043,14.6019652173959,15.7807413500738,15.1161778482376,17.9174825768103,16.2416041084425,20.5981549122431,34.3709629913734,34.8992380298405,31.7282666762402,22.1225730555071,39.0048851727495,31.9720184069379,40.171873478947,3.96134406868882,11.5129228566652,15.2179294872431,20.9261475697883,21.4042581122485,29.4542746877797,39.2759784357833,0.23467170806371,1.0591603543191,36.6077140771237,26.8764592294612,24.3811284310817,10.434136012571,15.3990323764046,14.4443991775654,64.7087457318269,9.27126510052548,0.170870880797853,4.74689796315412,0.555583582109135,0.188368457004691,0,0,0.169978429993855,0.69975726161829,0.138199973804424,11.4560474161814,0.949007980743406,5.69294507955176,5.72428306355547,9.61806161666556,15.0670168984863,17.3975006836419,30.499125162649,12.0407733312654,39.1437219341214,53.4351809254756,3.38215763210514,2.0932316446157,3.64008679005615,6.22243802700952,5.29555276258697,4.05494701177868,7.3935060346825,6.64042362704146,19.3989787187565,10.6297013163443,5.18454011264158,3.79213344753814,0.810900861160657,0.410843828659309,0.25984164595559,0.358053391334963,0.596044064343795,0.480781798079875,0.295379054349154,0.504832249740738,0.381034033274999,0.302478555410522,1.65678397257579,0.577271049841977,0.701261413089414,59.4033605071854,0,0,0,11.9777548299958,6.56888664079137,11.5385523288377,9.00347192132076,45.1414893631827,0,0.460325236507177,0,0.171853182343688,0,0.755393897389701,0.675022500231806,0.45032120322422,0,1.03552062350364,0.103787347584177,0.798049746802062,1.19513524027894,2.91728060481953,2.09613162627982,6.61836630420051,11.7790765734856,10.7138229764225,8.98573786857083,9.6024940470243,10.3926512954998,9.99719609346204,9.55143376192801,9.34767225111091,9.87890066036548,10.4784612082276,8.69132444586416,9.45255180272155,9.89006161927936,7.94874168725746,10.9718160763333,8.16388708332953,7.39152188836695,9.88355633099834,8.65806299821042,11.5922012811597,10.0610385080025,11.3119975918272,9.64209208305619,7.85599180320834,8.89762635931306,8.0773675547962,7.36615877705441,7.7468420592983,11.7673032698496,4.24677982494508,11.2287172053796,19.3383948643468,34.8144764365295,16.1031735957246,15.5351449865682
|phase1_expression=6.56610273129655,139.590163055744,150.604748237936,109.189580281766,111.198852048089,58.0862280815139,53.0300694151843,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,19.3048268642928,0,0,31.6784997130945,34.8702107222098,83.2636347966779,69.352681381611,68.0889095287409,38.3847307301875,45.1133932270276,14.1907526819395,0,0,0,17.6199488048278,43.553477083925,22.8669679013853,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.367093504323363,0.782391344348039,7.19483016055474,8.78744730937887,5.8328969722285,1.81982348112971,2.87505128729943,0,0,0,0,0.85960031981627,1.54701627683233,0,0,0,0,0,0,0,0,1.79760066311043,2.68952813725088,0.518448061542388,0.135005938331691,0.630974884054146,0.856952953211411,0.441737081903227,0,0.191690942036473,0,1.10115880999389,0.766124028511126,0.768032666281217,0.527545150920775,0.548925861614458,0,5.58365998002762,1.68828783009504,4.12555268997387,0.294628585473668,0.427115042397309,0.186399445825301,0.151452386666368,0,9.27566363845369,82.6006921902131,65.9572193696518,75.5584468292944,68.2265238320053,177.418647290545,41.7119927791303,0,0,0,14.2251853974447,0,0,0,6.061749148314,5.82727690592727,7.07734223020697,101.395285190525,0.258937883647172,24.9382793628906,2.60227990149204,4.26251669636998,6.45723392316964,5.72746034099966,9.17191915658498,15.3313241422204,5.19109432242185,33.1132527346598,10.6153266233985,18.4414208940046,11.2629174414801,11.1521308221101,14.9113408974498,21.0802173848314,19.2690970268379,38.3185582812887,0,0,0,4.04434726393021,5.03250663100489,0.251308704225729,1.04294592115366,0.767146371990992,3.94797284663164,1.29793010454206,12.0170449343373,12.1918831197891,25.5249986018011,34.7229062212682,0.910843100738926,2.06911893990126,1.98068342785884,3.61691562805716,7.21186891004075,5.25266253167884,8.62055865949505,13.9699820199068,0.215567992932842,0.567318240503458,1.05570674498369,1.09597866213787,3.33656699070717,4.52727816478817,11.3180175024369,4.77682240364384,0,0,0,0.207125772535502,2.11073453982987,3.78130329068131,4.97163944728941,8.46086196513836,11.2614992407786,13.7195027402741,12.0723030629829,32.5775305204403,22.5446994381468,25.6101243963389,35.427069771539,38.7429966677131,29.4197154490008,54.4878060167109,4.6263788684108,1.23485534855141,77.9788327841763,71.930554132484,0.639864751605702,1.39342003116263,3.22168653305233,11.8993279527772,24.9063409106255,34.2406127002606,46.0293189698176,78.2320034939052,96.2613849705032,117.782231448361,113.07917052909,52.1315257019448,41.0662294761919,67.9071741797392,4.1726938209678,6.62641373136427,10.1436962105772,13.8482902934814,17.8436288194216,29.1765010743725,33.0727089159866,45.9067560216563,23.863806631889,63.5495394197273,209.295554723527,1.16791574001266,0.786235980452812,2.69834534861824,3.04290182082754,3.85883455603867,5.60176873919124,20.1387296215567,17.8348749452539,36.7912293672029,53.1942364151212,68.8460753186731,79.8816443173275,70.2169280692971,65.300658521976,124.470428511749,10.9004382198297,1.13694847062291,4.23708938749267,5.09235257325564,10.0916806764056,13.4005005953453,18.091316707337,19.7084984336377,10.719189799221,10.4088404134924,11.4807433433391,12.6174752331118,8.11619414769709,18.5150794984335,0,0,31.4729134732183,56.8429697387749,9.79358598925531,5.86058432961016,0,47.7170052416265,1.57754109708128,1.17131623288992,1.93881057959519,1.67278158566786,0.891194696329576,1.69845918473299,2.42886421004937,4.67609372658099,2.37172666767914,0.642642632843614,10.2196861349953,17.6284947630583,13.1938437076397,19.7964147567043,14.6019652173959,15.7807413500738,15.1161778482376,17.9174825768103,16.2416041084425,20.5981549122431,34.3709629913734,34.8992380298405,31.7282666762402,22.1225730555071,39.0048851727495,31.9720184069379,40.171873478947,3.96134406868882,11.5129228566652,15.2179294872431,20.9261475697883,21.4042581122485,29.4542746877797,39.2759784357833,0.23467170806371,1.0591603543191,36.6077140771237,26.8764592294612,24.3811284310817,10.434136012571,15.3990323764046,14.4443991775654,64.7087457318269,9.27126510052548,0.170870880797853,4.74689796315412,0.555583582109135,0.188368457004691,0,0,0.169978429993855,0.69975726161829,0.138199973804424,11.4560474161814,0.949007980743406,5.69294507955176,5.72428306355547,9.61806161666556,15.0670168984863,17.3975006836419,30.499125162649,12.0407733312654,39.1437219341214,53.4351809254756,3.38215763210514,2.0932316446157,3.64008679005615,6.22243802700952,5.29555276258697,4.05494701177868,7.3935060346825,6.64042362704146,19.3989787187565,10.6297013163443,5.18454011264158,3.79213344753814,0.810900861160657,0.410843828659309,0.25984164595559,0.358053391334963,0.596044064343795,0.480781798079875,0.295379054349154,0.504832249740738,0.381034033274999,0.302478555410522,1.65678397257579,0.577271049841977,0.701261413089414,59.4033605071854,0,0,0,11.9777548299958,6.56888664079137,11.5385523288377,9.00347192132076,45.1414893631827,0,0.460325236507177,0,0.171853182343688,0,0.755393897389701,0.675022500231806,0.45032120322422,0,1.03552062350364,0.103787347584177,0.798049746802062,1.19513524027894,2.91728060481953,2.09613162627982,6.61836630420051,11.7790765734856,10.7138229764225,8.98573786857083,9.6024940470243,10.3926512954998,9.99719609346204,9.55143376192801,9.34767225111091,9.87890066036548,10.4784612082276,8.69132444586416,9.45255180272155,9.89006161927936,7.94874168725746,10.9718160763333,8.16388708332953,7.39152188836695,9.88355633099834,8.65806299821042,11.5922012811597,10.0610385080025,11.3119975918272,9.64209208305619,7.85599180320834,8.89762635931306,8.0773675547962,7.36615877705441,7.7468420592983,11.7673032698496,4.24677982494508,11.2287172053796,19.3383948643468,34.8144764365295,16.1031735957246,15.5351449865682
|short_description=p1@Rorc
|short_description=p1@Rorc
}}
}}

Latest revision as of 22:37, 25 September 2015

Short description:p1@Rorc
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rorc_5end
Coexpression cluster:MCL_coexpression_mm9:810
Association with transcript: 0bp_to_NM_011281, uc008qfy.2_5end
EntrezGene:Rorc
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rorc

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.57
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5139.59
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6150.60
CD326+ enterocyte, pool1.CNhs13542.11848-124I3109.19
CD326+ enterocyte, pool2.CNhs13197.11849-124I4111.20
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I758.09
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I853.03
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A319.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D131.68
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D234.87
GP2+ M cell, pool1.CNhs13228.11845-124H983.26
GP2+ M cell, pool2.CNhs13231.11846-124I169.35
GP2+ M cell, pool3.CNhs13240.11847-124I268.09
Ileum epithelium, pool1.CNhs13199.10252-104B938.38
Ileum epithelium, pool2.CNhs13232.10253-104C145.11
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C814.19
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F517.62
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F643.55
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F722.87
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C27.19
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B88.79
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.83
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.82
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.77
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.58
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.13
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G39.28
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F782.60
Mouse hepatocyte, donor1.CNhs13078.11714-123C465.96
Mouse hepatocyte, donor3.CNhs12615.11637-122C875.56
Mouse hepatocyte, donor6.CNhs13090.11822-124F468.23
Mouse hepatocyte, donor8.CNhs13091.11824-124F6177.42
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A741.71
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G614.23
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G16.06
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G25.83
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G37.08
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6101.40
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D724.94
adrenal gland, embryo E14.CNhs11038.406-44C52.60
adrenal gland, embryo E16.CNhs11004.1254-43D64.26
adrenal gland, embryo E17.CNhs11043.1263-45I16.46
adrenal gland, embryo E18.CNhs11026.1262-18F55.73
adrenal gland, neonate N00.CNhs11191.1311-23C19.17
adrenal gland, neonate N25.CNhs11223.1377-27I315.33
amnion, adult pregnant day17.5.CNhs10488.583-22A85.19
aorta, adult.CNhs10498.46-23H133.11
bone (os femoris), adult.CNhs10483.56-12G210.62
bone (os femoris), neonate N02.CNhs11227.1985-43F518.44
bone (os femoris), neonate N16.CNhs11225.1525-43A611.26
bone (os femoris), neonate N20.CNhs11195.1350-25C311.15
cecum, adult.CNhs10467.37-13H414.91
cerebellum, adult.CNhs10494.15-8B221.08
cerebellum, neonate N30.CNhs11135.1395-42I219.27
colon, adult.CNhs10468.36-18H738.32
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.04
corpus striatum, adult.CNhs10487.19-21D85.03
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D51.04
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F23.95
diencephalon, neonate N30.CNhs11201.1388-42B21.30
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B112.02
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A212.19
epididymis, adult.CNhs10490.58-23B225.52
eyeball, adult.CNhs10484.31-12G434.72
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E22.07
eyeball, embryo E15.CNhs10593.426-16C91.98
eyeball, embryo E17.CNhs11023.1261-18D43.62
eyeball, neonate N00.CNhs11207.633-15C67.21
eyeball, neonate N01.CNhs11140.1532-43E75.25
eyeball, neonate N02.CNhs11205.1551-44G88.62
eyeball, neonate N16.CNhs11188.777-19A213.97
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E73.34
forelimb, embryo E17.CNhs10598.1517-43C44.53
forelimb, embryo E18.CNhs11008.1520-43B511.32
gonad, embryo E13.CNhs11044.1564-45I64.78
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F52.11
heart, embryo E13.CNhs11013.376-3I93.78
heart, embryo E14.CNhs10597.403-26D44.97
heart, embryo E15.CNhs11017.431-16C88.46
heart, embryo E16.CNhs11021.457-17C611.26
heart, embryo E17.CNhs11025.479-18E513.72
heart, embryo E18.CNhs11030.1283-20G312.07
heart, neonate N00.CNhs11213.639-21E332.58
heart, neonate N03.CNhs11221.1349-25I222.54
heart, neonate N10.CNhs11118.749-24G125.61
heart, neonate N16.CNhs11209.782-15G135.43
heart, neonate N20.CNhs11127.821-26I638.74
heart, neonate N25.CNhs11196.1351-25D329.42
heart, neonate N30.CNhs11202.1390-42D254.49
hippocampus, adult.CNhs10478.13-16E84.63
hippocampus, neonate N00.CNhs11228.627-43G11.23
intestinal mucosa, adult.CNhs10506.860-29I377.98
intestine, adult.CNhs10496.178-9A371.93
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D83.22
intestine, embryo E16.CNhs10585.463-22H411.90
intestine, embryo E17.CNhs10582.482-18D324.91
intestine, embryo E18.CNhs10526.1289-20F734.24
intestine, neonate N00.CNhs11126.644-26D146.03
intestine, neonate N01.CNhs11192.1322-23E978.23
intestine, neonate N06.CNhs11102.688-20B896.26
intestine, neonate N07.CNhs11095.720-20F2117.78
intestine, neonate N10.CNhs11098.755-23A5113.08
intestine, neonate N20.CNhs11187.827-18D152.13
intestine, neonate N25.CNhs11121.1352-25E341.07
intestine, neonate N30.CNhs11131.1384-42G167.91
kidney, embryo E14.CNhs10606.411-4I94.17
kidney, embryo E15.CNhs10997.434-16F86.63
kidney, embryo E16.CNhs10584.464-22A510.14
kidney, embryo E17.CNhs11028.483-18I213.85
kidney, embryo E18.CNhs11001.1288-20C717.84
kidney, neonate N00.CNhs11214.646-21G729.18
kidney, neonate N10.CNhs11206.758-6D533.07
kidney, neonate N20.CNhs11113.832-19I145.91
kidney, neonate N25.CNhs11122.1353-25F323.86
kidney, neonate N30.CNhs11203.1385-42H163.55
liver, adult pregnant day01.CNhs10466.508-5B2209.30
liver, embryo E12.CNhs10601.355-15F81.17
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E12.70
liver, embryo E15.CNhs10520.433-16D73.04
liver, embryo E16.CNhs10523.462-17F53.86
liver, embryo E17.CNhs10510.481-18A35.60
liver, embryo E18.CNhs10579.499-43G420.14
liver, neonate N00.CNhs11117.641-24F417.83
liver, neonate N03.CNhs11123.1345-25G236.79
liver, neonate N06.CNhs11101.684-20A853.19
liver, neonate N07.CNhs11103.716-20H268.85
liver, neonate N10.CNhs11115.751-24B979.88
liver, neonate N20.CNhs11220.823-25A370.22
liver, neonate N25.CNhs11198.1368-26H165.30
liver, neonate N30.CNhs11106.1382-42D1124.47
lung, adult.CNhs10474.28-22B110.90
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F84.24
lung, embryo E15.CNhs11020.432-17C55.09
lung, embryo E16.CNhs10998.458-17B610.09
lung, embryo E17.CNhs10605.480-44A613.40
lung, embryo E18.CNhs10583.1287-20I618.09
lung, neonate N00.CNhs11224.640-42C619.71
lung, neonate N06.CNhs11212.683-20E510.72
lung, neonate N07.CNhs11111.715-19A310.41
lung, neonate N10.CNhs11219.750-23E611.48
lung, neonate N20.CNhs11109.822-18A412.62
lung, neonate N25.CNhs11119.1359-25C78.12
lung, neonate N30.CNhs11133.1394-42H218.52
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B631.47
mammary gland, adult pregnant day19.CNhs10476.588-5H256.84
medulla oblongata, adult.CNhs10477.17-12C29.79
medulla oblongata, neonate N30.CNhs11200.1396-42A35.86
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C247.72
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.67
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.68
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I710.22
ovary, embryo E18.CNhs11040.505-44H717.63
ovary, neonate N00.CNhs11217.1299-22I413.19
oviduct, adult pregnant day01.CNhs10500.988-6G619.80
pancreas, adult.CNhs10486.34-16E414.60
pancreas, embryo E14.CNhs11012.405-44F415.78
pancreas, embryo E15.CNhs11042.1556-45F215.12
pancreas, embryo E16.CNhs11003.460-26E517.92
pancreas, embryo E17.CNhs10599.1558-45G316.24
pancreas, embryo E18.CNhs10580.1535-43I720.60
pancreas, neonate N00.CNhs11105.645-26G934.37
pancreas, neonate N01.CNhs11138.1531-43D734.90
pancreas, neonate N02.CNhs11139.1539-43D831.73
pancreas, neonate N16.CNhs11136.787-43B622.12
pancreas, neonate N25.CNhs11094.1555-45E239.00
pancreas, neonate N30.CNhs11182.1548-44H531.97
pituitary gland, adult.CNhs10493.21-1G840.17
pituitary gland, embryo E12.CNhs11018.346-16E63.96
pituitary gland, embryo E13.CNhs11009.370-44C711.51
pituitary gland, embryo E14.CNhs11037.398-44A515.22
pituitary gland, embryo E15.CNhs10592.427-16B920.93
pituitary gland, embryo E16.CNhs11036.449-43F621.40
pituitary gland, embryo E17.CNhs11039.1265-44F529.45
pituitary gland, neonate N00.CNhs11190.1308-22E939.28
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G31.06
prostate, adult.CNhs10470.859-1F836.61
skin, adult.CNhs10492.30-1C326.88
skin, neonate N00.CNhs11124.650-25G424.38
skin, neonate N03.CNhs11215.662-22H310.43
skin, neonate N06.CNhs11097.693-20I515.40
skin, neonate N10.CNhs11108.762-6C414.44
small intestine, neonate N16.CNhs11114.790-21I164.71
spinal cord, adult.CNhs10505.24-13C99.27
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C14.75
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H611.46
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G85.69
stomach, embryo E16.CNhs11022.459-17D45.72
stomach, embryo E17.CNhs11006.1035-18D59.62
stomach, embryo E18.CNhs10999.1286-20C615.07
stomach, neonate N03.CNhs11193.1340-24B817.40
stomach, neonate N07.CNhs11210.718-18A930.50
stomach, neonate N25.CNhs11104.1355-25E412.04
stomach, neonate N30.CNhs11134.1386-42I139.14
submandibular gland, adult.CNhs10469.59-29C153.44
testis, adult.CNhs10504.57-7G53.38
testis, embryo E13.CNhs11031.389-23F52.09
testis, embryo E15.CNhs11034.443-27C53.64
testis, embryo E16.CNhs11033.470-26G56.22
testis, embryo E17.CNhs11029.486-18I55.30
testis, embryo E18.CNhs11027.503-18G54.05
testis, neonate N00.CNhs11189.1300-22B77.39
testis, neonate N07.CNhs11222.726-26I46.64
testis, neonate N10.CNhs11204.763-44D919.40
testis, neonate N20.CNhs11110.839-18H310.63
testis, neonate N30.CNhs11130.1391-42E25.18
thymus, adult.CNhs10471.38-12B53.79
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A21.66
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G20.70
tongue, adult.CNhs10499.32-1B459.40
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E411.98
uterus, adult pregnant day19.CNhs10497.590-15F56.57
uterus, adult.CNhs10509.92-27E511.54
vagina, adult.CNhs10502.89-27D59.00
vesicular gland, adult.CNhs10491.51-27F845.14
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D22.92
whole body, embryo E14.CNhs10519.395-14B12.10
whole body, embryo E16.CNhs10514.453-14F26.62
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G511.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G510.71
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G58.99
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G59.60
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G510.39
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G510.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G59.55
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G59.35
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G59.88
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G58.69
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G59.45
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G59.89
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G57.95
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G510.97
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G58.16
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G57.39
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G59.88
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G58.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G511.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G510.06
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G511.31
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G59.64
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.86
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G58.90
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G58.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G57.37
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G57.75
whole body, embryo E17.5.CNhs10513.490-9F911.77
whole body, embryo E17.CNhs10517.475-3I54.25
whole body, embryo E18.CNhs10516.493-3B311.23
whole body, neonate N00.CNhs10525.657-19C219.34
whole body, neonate N01.CNhs10576.659-23C634.81
whole body, neonate N06.CNhs10515.692-21D116.10
whole body, neonate N10.CNhs10518.761-6B415.54





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
intestine4.06e-1231
trunk region element4.60e-0979
mucosa3.35e-0815
gastrointestinal system3.76e-0847
intestinal mucosa1.68e-0713
wall of intestine1.68e-0713
gastrointestinal system mucosa1.68e-0713
exocrine gland3.66e-0725
exocrine system3.66e-0725
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:94176733..94176794,%2B&oldid=4218167"