FFCP PHASE1:Mm9::chr4:57314347..57314382,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=545622 | |EntrezGene=545622 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=56 | |||
|TSSclassifier=NA | |||
|UniProt=A2ALL0 | |UniProt=A2ALL0 | ||
|association_with_transcript=0bp_to_ENSMUST00000130900_5end | |association_with_transcript=0bp_to_ENSMUST00000130900_5end | ||
|cluster_id=chr4:57314347..57314382,- | |||
|description=CAGE_peak_4_at_Ptpn3_5end | |description=CAGE_peak_4_at_Ptpn3_5end | ||
|id=chr4:57314347..57314382,- | |id=chr4:57314347..57314382,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.07e-10,25;CL:0000223,6.58e-10,20;CL:0002563,2.63e-09,9;CL:0002251,2.63e-09,9;CL:0002076,6.51e-08,15;CL:0000239,2.09e-07,6;CL:0000677,2.09e-07,6;CL:0000584,2.09e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.39e-09!51;UBERON:0000344!9.27e-08!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.43e-12,51;UBERON:0000344,2.10e-10,15;UBERON:0003350,2.63e-09,9;UBERON:0004808,2.63e-09,9;UBERON:0001277,2.63e-09,9;UBERON:0001242,1.03e-08,13;UBERON:0001262,1.03e-08,13;UBERON:0004786,1.03e-08,13;UBERON:0004923,2.42e-08,24;UBERON:0000485,4.16e-07,11 | |||
|phase1_expression=0.960893082628764,3.14077866875425,5.0049916332849,3.32710632437513,8.01433167914156,4.53274034162102,3.03696432774183,1.16210991097419,0.563154888606667,0.468129052643987,0,0,0.342401459862411,0,0,0.607425802169478,0,0.315462165358238,0,0,1.19060606211498,1.98581902401771,1.30599894569468,2.87986361028132,2.98232065387321,2.8711598205751,2.15380998079537,2.15471232685889,0.760093677825496,0.252030129759931,1.99557459589774,3.17515336729816,0,0,2.3108129580102,1.32987716286794,2.45003227514843,0,0,0,0,0,0,1.00717454380462,1.11514624341466,0.550640256485045,0.782391344348039,0,0,0,0,0,0,0,0.336093799142464,0,0.286533439938757,0,0,0,0,0.338844532069132,0,0.449949858640699,0.988866362566974,0,0,0.384218305321555,0.103689612308478,0,0,0,0.220868540951614,0,0,0,0,1.27687338085188,1.68967186581868,0,0.0914876436024097,0,0,0,0.15279824777681,0,0.142371680799103,0.372798891650601,0.075726193333184,0.529000920747499,7.8263411949453,3.44169550792555,0,1.07940638327563,1.94932925234301,3.58421509677868,1.12355536105401,0,0,0,0.563373679106722,0,0,0,1.29894624606728,1.52015919285059,2.02209778005913,0.79928715803342,1.29468941823586,1.33597925158342,0,0.608930956624282,1.61430848079241,0.753613202763113,1.05829836422134,0.376999773989026,1.48316980640624,0.433798070759735,0.884610551949874,0.485300549842228,0.220841518460394,0.969750506270444,0,0.292780797011547,0.209446706813455,1.53274233125155,1.7972268675888,0.599902730993408,1.39777249780371,0.149790639404823,0,0,2.60736480288415,6.13717097592793,1.87009240103604,1.29793010454206,0.203678727700633,0.870848794270651,1.51633655060205,6.10281382070775,0.260240885925407,0.229902104433473,0,0,0,0.12811372028485,0.0937017245597288,2.58703370739016,0,0,0.175951124163949,0,0,0.696504333044333,0.411564272815887,0.59710280045548,0,0,0,0,0.234526059981096,0.180062061461015,0,0.393528463494808,0.154267112887378,0,0.536546802799238,0.583826711835847,0,0.820837320395476,1.21603214318784,1.31579988682799,1.75640092232841,1.61047702512446,4.6263788684108,0,3.96502539580558,1.05780226665418,0,0.696710015581316,0.644337306610467,0.80673409849337,0.667134131534611,0.760902504450237,3.32170343081158,0.823494773620054,0.251335208800269,0.795825888164603,0.58489226135736,1.79763881730844,2.80979464837102,1.1948476395262,1.32767530667157,1.14248512609729,1.1270773567308,0.407302655690628,0.387904974335251,0.771494018793504,0.758838445491087,1.47610147979602,1.255989822731,0.740382983530803,1.48226313543574,0,0,0,0,0.241177159752417,0,0,0.972811360650212,0.274561413188081,4.31304619582064,0.744281895337007,0,0.505157755894224,0.538192240565737,0.482443521363367,1.47802552133284,0,0,0.678980343100753,0.234690248288502,0.670025029767263,1.90434912708811,1.36593553500459,0.472905432318573,0.8858587585951,0.318909537314974,0.983179888294428,0.690739927463582,1.59113964439663,0,0,1.47529281905711,0.827810238914197,0,0,0.327869890753351,1.26235463602186,0.315508219416257,0.390438744296638,0.861693590931196,0,0,0,0,0.292255857911312,0,0,0.99358059645788,0.178065603667255,0.325773918707152,1.15479086080775,2.65490276679926,0.728341908464944,0.302323556964751,0.377210159511796,0.590603785761546,0.922305443831782,0.258428293168221,0.363533729477506,0.356497378384721,0.316036757935816,0,1.03135543248187,1.36175842301515,0,0.388076051348264,0.214337035031592,0,0.356737635204141,0.987294123612726,0.304464949114599,31.6806805886009,4.66030555900404,2.20528398054962,1.48397627647332,0.161464426695906,0.241251699712623,0.596861720015682,0.984845398470368,0.291480836629851,0,0.341741761595705,0,0,0.188368457004691,0.27338845544205,0,2.71965487990169,1.11961161858926,1.10559979043539,1.90934123603023,0.158167996790568,0.406638934253697,0.324016022465404,0.836353184057875,0.436725127492355,0.539457385539283,0.743881101528023,1.30877970992015,1.68499465279331,1.86401793926078,0.56369293868419,0.149516546043979,0.496375471371293,0.194451188344048,0,0.168956125490778,0.234714477291508,0.5208175393758,0.209718688851422,0.241584120826006,0.288030006257865,0,0.810900861160657,0.821687657318618,0.25984164595559,1.43221356533985,0.198681354781265,0.120195449519969,0.443068581523732,0.403865799792591,0.304827226619999,0.504130925684203,0.487289403698762,0.0962118416403295,0.467507608726276,3.17422537061296,4.43971906748129,7.44625009858648,3.8613461763738,2.12508553435409,4.69206188627955,0.915758121336325,0.643105137237198,1.50471631210609,0.564751842617067,0.460325236507177,1.14579102687879,1.03111909406213,2.05524755931193,1.5107877947794,2.02506750069542,3.15224842256954,1.35942722695261,2.07104124700728,0.31136204275253,0.399024873401031,0.341467211508268,0.729320151204882,0.209613162627982,0,0.222246727801615,0.206035057238894,0.320919209591815,0.758091635291392,1.01391719956096,1.32038438970253,0.187283014939765,0.384150914429216,0.402048282689293,0.476293691283074,0.463537303779422,0.192909220463705,0.412085900803307,0.883193520806384,0,0.354951612318675,0.476872379894642,0.436039249896986,0.564656282491984,0.423073039458382,0.365855945745545,0.526139422875686,0.950628796921032,0,0.355905054372522,0.29551344712669,2.04615521584845,0.309873682371932,0.578719832943424,0.249810577937946,0.701794825336225,0,0.57386499620653,0.441182838239031,0.231867835620421 | |phase1_expression=0.960893082628764,3.14077866875425,5.0049916332849,3.32710632437513,8.01433167914156,4.53274034162102,3.03696432774183,1.16210991097419,0.563154888606667,0.468129052643987,0,0,0.342401459862411,0,0,0.607425802169478,0,0.315462165358238,0,0,1.19060606211498,1.98581902401771,1.30599894569468,2.87986361028132,2.98232065387321,2.8711598205751,2.15380998079537,2.15471232685889,0.760093677825496,0.252030129759931,1.99557459589774,3.17515336729816,0,0,2.3108129580102,1.32987716286794,2.45003227514843,0,0,0,0,0,0,1.00717454380462,1.11514624341466,0.550640256485045,0.782391344348039,0,0,0,0,0,0,0,0.336093799142464,0,0.286533439938757,0,0,0,0,0.338844532069132,0,0.449949858640699,0.988866362566974,0,0,0.384218305321555,0.103689612308478,0,0,0,0.220868540951614,0,0,0,0,1.27687338085188,1.68967186581868,0,0.0914876436024097,0,0,0,0.15279824777681,0,0.142371680799103,0.372798891650601,0.075726193333184,0.529000920747499,7.8263411949453,3.44169550792555,0,1.07940638327563,1.94932925234301,3.58421509677868,1.12355536105401,0,0,0,0.563373679106722,0,0,0,1.29894624606728,1.52015919285059,2.02209778005913,0.79928715803342,1.29468941823586,1.33597925158342,0,0.608930956624282,1.61430848079241,0.753613202763113,1.05829836422134,0.376999773989026,1.48316980640624,0.433798070759735,0.884610551949874,0.485300549842228,0.220841518460394,0.969750506270444,0,0.292780797011547,0.209446706813455,1.53274233125155,1.7972268675888,0.599902730993408,1.39777249780371,0.149790639404823,0,0,2.60736480288415,6.13717097592793,1.87009240103604,1.29793010454206,0.203678727700633,0.870848794270651,1.51633655060205,6.10281382070775,0.260240885925407,0.229902104433473,0,0,0,0.12811372028485,0.0937017245597288,2.58703370739016,0,0,0.175951124163949,0,0,0.696504333044333,0.411564272815887,0.59710280045548,0,0,0,0,0.234526059981096,0.180062061461015,0,0.393528463494808,0.154267112887378,0,0.536546802799238,0.583826711835847,0,0.820837320395476,1.21603214318784,1.31579988682799,1.75640092232841,1.61047702512446,4.6263788684108,0,3.96502539580558,1.05780226665418,0,0.696710015581316,0.644337306610467,0.80673409849337,0.667134131534611,0.760902504450237,3.32170343081158,0.823494773620054,0.251335208800269,0.795825888164603,0.58489226135736,1.79763881730844,2.80979464837102,1.1948476395262,1.32767530667157,1.14248512609729,1.1270773567308,0.407302655690628,0.387904974335251,0.771494018793504,0.758838445491087,1.47610147979602,1.255989822731,0.740382983530803,1.48226313543574,0,0,0,0,0.241177159752417,0,0,0.972811360650212,0.274561413188081,4.31304619582064,0.744281895337007,0,0.505157755894224,0.538192240565737,0.482443521363367,1.47802552133284,0,0,0.678980343100753,0.234690248288502,0.670025029767263,1.90434912708811,1.36593553500459,0.472905432318573,0.8858587585951,0.318909537314974,0.983179888294428,0.690739927463582,1.59113964439663,0,0,1.47529281905711,0.827810238914197,0,0,0.327869890753351,1.26235463602186,0.315508219416257,0.390438744296638,0.861693590931196,0,0,0,0,0.292255857911312,0,0,0.99358059645788,0.178065603667255,0.325773918707152,1.15479086080775,2.65490276679926,0.728341908464944,0.302323556964751,0.377210159511796,0.590603785761546,0.922305443831782,0.258428293168221,0.363533729477506,0.356497378384721,0.316036757935816,0,1.03135543248187,1.36175842301515,0,0.388076051348264,0.214337035031592,0,0.356737635204141,0.987294123612726,0.304464949114599,31.6806805886009,4.66030555900404,2.20528398054962,1.48397627647332,0.161464426695906,0.241251699712623,0.596861720015682,0.984845398470368,0.291480836629851,0,0.341741761595705,0,0,0.188368457004691,0.27338845544205,0,2.71965487990169,1.11961161858926,1.10559979043539,1.90934123603023,0.158167996790568,0.406638934253697,0.324016022465404,0.836353184057875,0.436725127492355,0.539457385539283,0.743881101528023,1.30877970992015,1.68499465279331,1.86401793926078,0.56369293868419,0.149516546043979,0.496375471371293,0.194451188344048,0,0.168956125490778,0.234714477291508,0.5208175393758,0.209718688851422,0.241584120826006,0.288030006257865,0,0.810900861160657,0.821687657318618,0.25984164595559,1.43221356533985,0.198681354781265,0.120195449519969,0.443068581523732,0.403865799792591,0.304827226619999,0.504130925684203,0.487289403698762,0.0962118416403295,0.467507608726276,3.17422537061296,4.43971906748129,7.44625009858648,3.8613461763738,2.12508553435409,4.69206188627955,0.915758121336325,0.643105137237198,1.50471631210609,0.564751842617067,0.460325236507177,1.14579102687879,1.03111909406213,2.05524755931193,1.5107877947794,2.02506750069542,3.15224842256954,1.35942722695261,2.07104124700728,0.31136204275253,0.399024873401031,0.341467211508268,0.729320151204882,0.209613162627982,0,0.222246727801615,0.206035057238894,0.320919209591815,0.758091635291392,1.01391719956096,1.32038438970253,0.187283014939765,0.384150914429216,0.402048282689293,0.476293691283074,0.463537303779422,0.192909220463705,0.412085900803307,0.883193520806384,0,0.354951612318675,0.476872379894642,0.436039249896986,0.564656282491984,0.423073039458382,0.365855945745545,0.526139422875686,0.950628796921032,0,0.355905054372522,0.29551344712669,2.04615521584845,0.309873682371932,0.578719832943424,0.249810577937946,0.701794825336225,0,0.57386499620653,0.441182838239031,0.231867835620421 | ||
|short_description=p4@Ptpn3 | |short_description=p4@Ptpn3 | ||
}} | }} |
Latest revision as of 02:55, 27 September 2015
Short description: | p4@Ptpn3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Ptpn3_5end |
Coexpression cluster: | MCL_coexpression_mm9:56 |
Association with transcript: | 0bp_to_ENSMUST00000130900_5end |
EntrezGene: | Ptpn3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.07e-10 | 25 |
endodermal cell | 6.58e-10 | 20 |
intestinal epithelial cell | 2.63e-09 | 9 |
epithelial cell of alimentary canal | 2.63e-09 | 9 |
endo-epithelial cell | 6.51e-08 | 15 |
brush border epithelial cell | 2.09e-07 | 6 |
gut absorptive cell | 2.09e-07 | 6 |
enterocyte | 2.09e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.43e-12 | 51 |
mucosa | 2.10e-10 | 15 |
epithelium of mucosa | 2.63e-09 | 9 |
gastrointestinal system epithelium | 2.63e-09 | 9 |
intestinal epithelium | 2.63e-09 | 9 |
intestinal mucosa | 1.03e-08 | 13 |
wall of intestine | 1.03e-08 | 13 |
gastrointestinal system mucosa | 1.03e-08 | 13 |
organ component layer | 2.42e-08 | 24 |
simple columnar epithelium | 4.16e-07 | 11 |