FFCP PHASE1:Mm9::chr16:38800439..38800450,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=22268 | |EntrezGene=22268 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=27 | |||
|TSSclassifier=NA | |||
|UniProt=Q9Z2C6 | |UniProt=Q9Z2C6 | ||
|association_with_transcript=-123bp_to_ENSMUST00000057767,NM_178924,uc007zfm.2_5end | |association_with_transcript=-123bp_to_ENSMUST00000057767,NM_178924,uc007zfm.2_5end | ||
|cluster_id=chr16:38800439..38800450,- | |||
|description=CAGE_peak_6_at_Upk1b_5end | |description=CAGE_peak_6_at_Upk1b_5end | ||
|id=chr16:38800439..38800450,- | |id=chr16:38800439..38800450,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000068,7.36e-17,3;CL:0002202,7.36e-17,3;CL:0000069,7.36e-17,3;CL:0002632,7.36e-17,3;CL:0002368,7.36e-17,3;CL:0000307,7.36e-17,3;CL:0000377,7.36e-17,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005178!8.66e-13!17;UBERON:0005181!8.66e-13!17;UBERON:0002224!8.66e-13!17;UBERON:0000915!8.66e-13!17;UBERON:0008947!8.66e-13!17;UBERON:0003258!8.66e-13!17;UBERON:0002048!6.73e-10!14;UBERON:0000117!6.73e-10!14;UBERON:0000171!6.73e-10!14;UBERON:0000170!6.73e-10!14;UBERON:0005597!6.73e-10!14;UBERON:0000118!6.73e-10!14;UBERON:0005153!5.33e-09!17;UBERON:0000464!1.05e-08!57;UBERON:0003103!2.00e-08!43;UBERON:0006554!4.66e-07!16 | |ontology_enrichment_uberon=UBERON:0005178!8.66e-13!17;UBERON:0005181!8.66e-13!17;UBERON:0002224!8.66e-13!17;UBERON:0000915!8.66e-13!17;UBERON:0008947!8.66e-13!17;UBERON:0003258!8.66e-13!17;UBERON:0002048!6.73e-10!14;UBERON:0000117!6.73e-10!14;UBERON:0000171!6.73e-10!14;UBERON:0000170!6.73e-10!14;UBERON:0005597!6.73e-10!14;UBERON:0000118!6.73e-10!14;UBERON:0005153!5.33e-09!17;UBERON:0000464!1.05e-08!57;UBERON:0003103!2.00e-08!43;UBERON:0006554!4.66e-07!16 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005178,7.43e-29,17;UBERON:0005181,7.43e-29,17;UBERON:0002224,7.43e-29,17;UBERON:0000915,7.43e-29,17;UBERON:0008947,7.43e-29,17;UBERON:0003258,7.43e-29,17;UBERON:0005153,2.72e-18,17;UBERON:0002048,5.97e-17,14;UBERON:0000117,5.97e-17,14;UBERON:0000171,5.97e-17,14;UBERON:0000170,5.97e-17,14;UBERON:0005597,5.97e-17,14;UBERON:0000118,5.97e-17,14;UBERON:0003126,7.36e-17,3;UBERON:0001005,7.36e-17,3;UBERON:0007196,7.36e-17,3;UBERON:0001558,7.36e-17,3;UBERON:0005157,2.01e-15,20;UBERON:0002100,7.16e-13,90;UBERON:0010147,2.99e-12,2;UBERON:0003937,2.99e-12,2;UBERON:0005399,2.99e-12,2;UBERON:0000065,3.20e-11,41;UBERON:0005177,5.06e-11,79;UBERON:0001004,6.37e-11,42;UBERON:0009569,1.08e-09,66;UBERON:0000162,2.23e-08,3;UBERON:0001353,2.23e-08,3;UBERON:0000163,2.23e-08,3;UBERON:0006866,2.23e-08,3;UBERON:0001046,2.23e-08,3;UBERON:0000164,2.23e-08,3;UBERON:0000931,2.23e-08,3;UBERON:0000998,5.73e-07,1;UBERON:0007194,5.73e-07,1;UBERON:0006868,5.73e-07,1;UBERON:0002367,6.50e-07,1;UBERON:0009846,6.50e-07,1;UBERON:0003353,6.50e-07,1;UBERON:0004902,6.50e-07,1;UBERON:0003820,6.50e-07,1;UBERON:0009847,6.50e-07,1;UBERON:0001255,7.38e-07,1;UBERON:0001556,7.38e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279972843250725,0,0,0,0,0,0,2.57836046138721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,4.32982082022428,6.58735650235256,3.53867111510348,0.11418387971906,0,0,0.173485326766136,0,0.230615497256059,0,0,0,3.21353458054686,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0.712875546952214,0.248813941220186,6.06534620240819,0,0,0,0.180062129805349,0.150704817835715,0.204109497453984,0.2562274405697,0.374806898238915,0,0,0,0.175951124163949,0.43839146485515,0.556094498451196,0,0,0,0,0,0,0.207125772535502,0,0.36012412292203,0.23674473558521,0,0.925602677324269,0.232533944750408,0.536546802799238,0.116765342367169,0,0.164167464079095,0.243206428637567,0.146199987425332,0.439100230582101,0.268412837520744,0,0,0,0,0.426576501070468,0.232236671860439,0.257734922644187,0,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0.610953983535943,0.193952487167626,0.631222379012867,0.252946148497029,0.147610147979602,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0.25462585178142,0,0.162135226775035,0,0,0,0,0,0,0,0.739012760666419,0.189491411770485,0.325929952884052,0.339490171550376,0,0.167506257441816,1.42826184531608,1.56106918286239,0.788175720530955,1.32878813789265,1.2756381492599,2.13022309130459,1.20879487306127,1.73578870297814,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.178065603667255,0.325773918707152,0,1.32745138339963,0.485561272309963,0,0,0,0.614870295887855,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,25.3607657763206,0,0.161464426695906,0,0,0,0,0,0,0.412773735926445,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0.836353184057875,0.436725127492355,0.674321731924103,0.165306911450672,0.26175594198403,0.259229946583586,0,0,0.149516546043979,0,0,0,0.675824501963113,0,0.13020438484395,0,0,0,0,0.405450430580328,0.102710957164827,0,0.179026695667481,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,14.8755987404787,0.187682475451182,0,0,39.1226241147583,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.341467211508268,0.243106717068294,0,0,0,0,0.962757628775446,0.505394423527595,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.287177344778066,0,0.231768651889711,0.38581844092741,0,0.147198920134397,0.685738504770831,0.354951612318675,0.238436189947321,0.145346416632329,0.188218760830661,0.25384382367503,0.548783918618318,0,0.271608227691724,0.561142271657738,0.237270036248348,0.197008964751127,0,0.309873682371932,0.192906610981141,0.499621155875892,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279972843250725,0,0,0,0,0,0,2.57836046138721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,4.32982082022428,6.58735650235256,3.53867111510348,0.11418387971906,0,0,0.173485326766136,0,0.230615497256059,0,0,0,3.21353458054686,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0.712875546952214,0.248813941220186,6.06534620240819,0,0,0,0.180062129805349,0.150704817835715,0.204109497453984,0.2562274405697,0.374806898238915,0,0,0,0.175951124163949,0.43839146485515,0.556094498451196,0,0,0,0,0,0,0.207125772535502,0,0.36012412292203,0.23674473558521,0,0.925602677324269,0.232533944750408,0.536546802799238,0.116765342367169,0,0.164167464079095,0.243206428637567,0.146199987425332,0.439100230582101,0.268412837520744,0,0,0,0,0.426576501070468,0.232236671860439,0.257734922644187,0,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0.610953983535943,0.193952487167626,0.631222379012867,0.252946148497029,0.147610147979602,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0.25462585178142,0,0.162135226775035,0,0,0,0,0,0,0,0.739012760666419,0.189491411770485,0.325929952884052,0.339490171550376,0,0.167506257441816,1.42826184531608,1.56106918286239,0.788175720530955,1.32878813789265,1.2756381492599,2.13022309130459,1.20879487306127,1.73578870297814,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.178065603667255,0.325773918707152,0,1.32745138339963,0.485561272309963,0,0,0,0.614870295887855,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,25.3607657763206,0,0.161464426695906,0,0,0,0,0,0,0.412773735926445,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0.836353184057875,0.436725127492355,0.674321731924103,0.165306911450672,0.26175594198403,0.259229946583586,0,0,0.149516546043979,0,0,0,0.675824501963113,0,0.13020438484395,0,0,0,0,0.405450430580328,0.102710957164827,0,0.179026695667481,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,14.8755987404787,0.187682475451182,0,0,39.1226241147583,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.341467211508268,0.243106717068294,0,0,0,0,0.962757628775446,0.505394423527595,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.287177344778066,0,0.231768651889711,0.38581844092741,0,0.147198920134397,0.685738504770831,0.354951612318675,0.238436189947321,0.145346416632329,0.188218760830661,0.25384382367503,0.548783918618318,0,0.271608227691724,0.561142271657738,0.237270036248348,0.197008964751127,0,0.309873682371932,0.192906610981141,0.499621155875892,0,0,0,0,0 | ||
|short_description=p6@Upk1b | |short_description=p6@Upk1b | ||
}} | }} |
Latest revision as of 00:13, 2 October 2015
Short description: | p6@Upk1b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Upk1b_5end |
Coexpression cluster: | MCL_coexpression_mm9:27 |
Association with transcript: | -123bp_to_ENSMUST00000057767, NM_178924, uc007zfm.2_5end |
EntrezGene: | Upk1b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 7.36e-17 | 3 |
epithelial cell of tracheobronchial tree | 7.36e-17 | 3 |
branched duct epithelial cell | 7.36e-17 | 3 |
epithelial cell of lower respiratory tract | 7.36e-17 | 3 |
respiratory epithelial cell | 7.36e-17 | 3 |
tracheal epithelial cell | 7.36e-17 | 3 |
tracheoblast | 7.36e-17 | 3 |