FFCP PHASE1:Mm9::chr17:28409059..28409076,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19015 | |EntrezGene=19015 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=E9PV57 | |UniProt=E9PV57 | ||
|association_with_transcript=-61bp_to_ENSMUST00000169040_5end | |association_with_transcript=-61bp_to_ENSMUST00000169040_5end | ||
|cluster_id=chr17:28409059..28409076,+ | |||
|description=CAGE_peak_6_at_Ppard_5end | |description=CAGE_peak_6_at_Ppard_5end | ||
|id=chr17:28409059..28409076,+ | |id=chr17:28409059..28409076,+ | ||
|ontology_enrichment_celltype=CL:0002563!7.72e-12!9;CL:0002251!7.72e-12!9;CL:0000239!5.00e-08!6;CL:0000677!5.00e-08!6;CL:0000212!5.00e-08!6;CL:0000584!5.00e-08!6 | |ontology_enrichment_celltype=CL:0002563!7.72e-12!9;CL:0002251!7.72e-12!9;CL:0000239!5.00e-08!6;CL:0000677!5.00e-08!6;CL:0000212!5.00e-08!6;CL:0000584!5.00e-08!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.53e-22,9;CL:0002251,1.53e-22,9;CL:0000239,9.24e-15,6;CL:0000677,9.24e-15,6;CL:0000584,9.24e-15,6;CL:0002076,7.79e-13,15;CL:0000075,1.47e-12,7;CL:0002250,2.18e-09,3;CL:0000223,3.36e-09,20;CL:0000066,1.23e-08,25;CL:0000349,5.29e-08,3;CL:0000351,5.29e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!8.59e-34!59;UBERON:0000160!7.70e-30!43;UBERON:0000344!4.27e-18!15;UBERON:0001242!2.96e-16!13;UBERON:0000060!2.96e-16!13;UBERON:0001262!2.96e-16!13;UBERON:0004786!2.96e-16!13;UBERON:0004119!7.65e-14!130;UBERON:0000925!7.65e-14!130;UBERON:0006595!7.65e-14!130;UBERON:0004923!8.47e-14!24;UBERON:0001007!1.34e-12!128;UBERON:0001555!1.34e-12!128;UBERON:0007026!1.34e-12!128;UBERON:0003350!7.72e-12!9;UBERON:0004808!7.72e-12!9;UBERON:0001277!7.72e-12!9;UBERON:0004921!2.13e-11!126;UBERON:0004185!2.13e-11!126;UBERON:0000485!3.39e-09!11;UBERON:0002108!1.96e-08!16 | |ontology_enrichment_uberon=UBERON:0005409!8.59e-34!59;UBERON:0000160!7.70e-30!43;UBERON:0000344!4.27e-18!15;UBERON:0001242!2.96e-16!13;UBERON:0000060!2.96e-16!13;UBERON:0001262!2.96e-16!13;UBERON:0004786!2.96e-16!13;UBERON:0004119!7.65e-14!130;UBERON:0000925!7.65e-14!130;UBERON:0006595!7.65e-14!130;UBERON:0004923!8.47e-14!24;UBERON:0001007!1.34e-12!128;UBERON:0001555!1.34e-12!128;UBERON:0007026!1.34e-12!128;UBERON:0003350!7.72e-12!9;UBERON:0004808!7.72e-12!9;UBERON:0001277!7.72e-12!9;UBERON:0004921!2.13e-11!126;UBERON:0004185!2.13e-11!126;UBERON:0000485!3.39e-09!11;UBERON:0002108!1.96e-08!16 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.82e-37,31;UBERON:0005409,7.21e-32,47;UBERON:0001242,1.36e-31,13;UBERON:0001262,1.36e-31,13;UBERON:0004786,1.36e-31,13;UBERON:0000344,3.28e-31,15;UBERON:0003350,1.53e-22,9;UBERON:0004808,1.53e-22,9;UBERON:0001277,1.53e-22,9;UBERON:0004923,2.28e-21,24;UBERON:0000485,3.95e-18,11;UBERON:0004119,2.67e-11,118;UBERON:0000925,2.67e-11,118;UBERON:0006595,2.67e-11,118;UBERON:0002108,1.26e-10,4;UBERON:0001007,1.95e-10,116;UBERON:0001555,1.95e-10,116;UBERON:0007026,1.95e-10,116;UBERON:0004921,1.03e-09,114;UBERON:0000331,3.77e-08,3;UBERON:0002116,3.77e-08,3;UBERON:0001204,3.77e-08,3;UBERON:0001168,3.77e-08,3;UBERON:0000358,5.29e-08,3;UBERON:0000307,5.29e-08,3;UBERON:0007010,5.29e-08,3;UBERON:0001155,9.70e-07,2;UBERON:0000059,9.70e-07,2 | |||
|phase1_expression=0,1.39590163055744,2.27499619694768,3.0246421130683,3.00537437967808,3.3575854382378,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,1.91990907352088,0.68822784320151,0,0.86152399231815,1.939241094173,3.42042155021473,2.77233142735924,1.10865255327652,0,0,0,4.62162591602039,4.82080471539628,4.49172583777212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,3.72783522436244,0,0,5.62005521458901,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.505445516867349,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0.348252166522167,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97376904685418,2.11560453330835,0,0.232236671860439,0.38660238396628,1.00841762311671,0.667134131534611,0.190225626112559,5.21981967698963,0,0,0.198956472041151,0.19496408711912,2.69645822596266,3.8904848977445,2.78797782556114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,1.32745138339963,0,0,0.188605079755898,0.590603785761546,0,0.258428293168221,0.727067458955011,0,0.632073515871632,2.10837217149998,2.06271086496374,0,0,0,0,0,0,0,0,3.98941903708308,0.21183207086382,0.220528398054962,0.65954501176592,0.645857706783622,0.844380948994182,0.358117032009409,0.328281799490123,3.78925087618806,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0.609958401380546,0.648032044930808,1.04544148007234,1.52853794622324,0.404593039154462,0.661227645802687,1.30877970992015,1.42576470620972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0.0974578807397524,0,0,0.906921534460845,1.99787358036658,2.06341870201794,2.68615386182526,0,0,0.36630324853453,0.428736758158132,2.50786052017682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551530525350042,0,0,0,0,0.25347929989024,0,0,0,0.114870937911227,0,0,0,0,0.147198920134397,0,0,0,0,0,0.169229215783353,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0.429742108096597,0,0,0 | |phase1_expression=0,1.39590163055744,2.27499619694768,3.0246421130683,3.00537437967808,3.3575854382378,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,1.91990907352088,0.68822784320151,0,0.86152399231815,1.939241094173,3.42042155021473,2.77233142735924,1.10865255327652,0,0,0,4.62162591602039,4.82080471539628,4.49172583777212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,3.72783522436244,0,0,5.62005521458901,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.505445516867349,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0.348252166522167,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97376904685418,2.11560453330835,0,0.232236671860439,0.38660238396628,1.00841762311671,0.667134131534611,0.190225626112559,5.21981967698963,0,0,0.198956472041151,0.19496408711912,2.69645822596266,3.8904848977445,2.78797782556114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,1.32745138339963,0,0,0.188605079755898,0.590603785761546,0,0.258428293168221,0.727067458955011,0,0.632073515871632,2.10837217149998,2.06271086496374,0,0,0,0,0,0,0,0,3.98941903708308,0.21183207086382,0.220528398054962,0.65954501176592,0.645857706783622,0.844380948994182,0.358117032009409,0.328281799490123,3.78925087618806,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0.609958401380546,0.648032044930808,1.04544148007234,1.52853794622324,0.404593039154462,0.661227645802687,1.30877970992015,1.42576470620972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0.0974578807397524,0,0,0.906921534460845,1.99787358036658,2.06341870201794,2.68615386182526,0,0,0.36630324853453,0.428736758158132,2.50786052017682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551530525350042,0,0,0,0,0.25347929989024,0,0,0,0.114870937911227,0,0,0,0,0.147198920134397,0,0,0,0,0,0.169229215783353,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0.429742108096597,0,0,0 | ||
|short_description=p6@Ppard | |short_description=p6@Ppard | ||
}} | }} |
Latest revision as of 04:12, 26 September 2015
Short description: | p6@Ppard |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Ppard_5end |
Coexpression cluster: | NA |
Association with transcript: | -61bp_to_ENSMUST00000169040_5end |
EntrezGene: | Ppard |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.53e-22 | 9 |
epithelial cell of alimentary canal | 1.53e-22 | 9 |
brush border epithelial cell | 9.24e-15 | 6 |
gut absorptive cell | 9.24e-15 | 6 |
enterocyte | 9.24e-15 | 6 |
endo-epithelial cell | 7.79e-13 | 15 |
columnar/cuboidal epithelial cell | 1.47e-12 | 7 |
intestinal crypt stem cell | 2.18e-09 | 3 |
endodermal cell | 3.36e-09 | 20 |
epithelial cell | 1.23e-08 | 25 |
extraembryonic cell | 5.29e-08 | 3 |
trophoblast cell | 5.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 8.82e-37 | 31 |
gastrointestinal system | 7.21e-32 | 47 |
intestinal mucosa | 1.36e-31 | 13 |
wall of intestine | 1.36e-31 | 13 |
gastrointestinal system mucosa | 1.36e-31 | 13 |
mucosa | 3.28e-31 | 15 |
epithelium of mucosa | 1.53e-22 | 9 |
gastrointestinal system epithelium | 1.53e-22 | 9 |
intestinal epithelium | 1.53e-22 | 9 |
organ component layer | 2.28e-21 | 24 |
simple columnar epithelium | 3.95e-18 | 11 |
endoderm-derived structure | 2.67e-11 | 118 |
endoderm | 2.67e-11 | 118 |
presumptive endoderm | 2.67e-11 | 118 |
small intestine | 1.26e-10 | 4 |
digestive system | 1.95e-10 | 116 |
digestive tract | 1.95e-10 | 116 |
primitive gut | 1.95e-10 | 116 |
subdivision of digestive tract | 1.03e-09 | 114 |
ileal mucosa | 3.77e-08 | 3 |
ileum | 3.77e-08 | 3 |
mucosa of small intestine | 3.77e-08 | 3 |
wall of small intestine | 3.77e-08 | 3 |
blastocyst | 5.29e-08 | 3 |
blastula | 5.29e-08 | 3 |
cleaving embryo | 5.29e-08 | 3 |
colon | 9.70e-07 | 2 |
large intestine | 9.70e-07 | 2 |