CL:0002554: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{CL
|id=CL:0002554
|name=fibroblast of lymphatic vessel
|namespace=cell
|def="A fibroblast of the lymphatic system." [GOC:tfm]
|xref=
|is_a=CL:0000057
|synonym=
|comm...") |
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Revision as of 17:41, 15 June 2012
| Name: | fibroblast of lymphatic vessel |
|---|---|
| Namespace: | cell |
| Definition: | "A fibroblast of the lymphatic system." [GOC:tfm] |
| Created by: | tmeehan |
| Creation date: | 2011-02-28T05:16:18Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000057(fibroblast) |
|---|---|
| part_of: | UBERON:0001473(lymphatic vessel) |
Children
| is a: | FF:0000110 (mouse fibroblast of lymphatic vessel) |
|---|---|
| derives from: | FF:0000065 (human fibroblast of lymphatic vessel sample) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11506-119G3 (Fibroblast - Lymphatic, donor1)
- 11586-120G2 (Fibroblast - Lymphatic, donor2)
- 11638-122C9
- 11667-122G2 (Fibroblast - Lymphatic, donor3)
- 11715-123C5
- 11733-123E5
Mouse (Mus musculus)
- 11506-119G3 (Fibroblast - Lymphatic, donor1)
- 11586-120G2 (Fibroblast - Lymphatic, donor2)
- 11638-122C9
- 11667-122G2 (Fibroblast - Lymphatic, donor3)
- 11715-123C5
- 11733-123E5
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002554 (fibroblast of lymphatic vessel), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 3.11e-50 | FFCP PHASE1:Hg19::chr6:155635818..155635834,-#_6fcca9a2626c0a29c140b058c4771114 | p4@TFB1M |
| 3.11e-50 | FFCP PHASE2:Hg19::chr6:155635818..155635834,-#_6fcca9a2626c0a29c140b058c4771114 | p4@TFB1M |
| 3.94e-37 | FFCP PHASE1:Hg19::chr11:46321160..46321164,+#_9c9de607bb0fc4fe1a675f45f6220e53 | p@chr11:46321160..46321164, + |
| 3.94e-37 | FFCP PHASE2:Hg19::chr11:46321160..46321164,+#_9c9de607bb0fc4fe1a675f45f6220e53 | p@chr11:46321160..46321164, + |
| 6.83e-37 | FFCP PHASE1:Hg19::chr13:94958004..94958025,+#_ca19a2f4bfb39c55cb211e7d2dcfb160 | p@chr13:94958004..94958025, + |
| 6.83e-37 | FFCP PHASE2:Hg19::chr13:94958004..94958025,+#_ca19a2f4bfb39c55cb211e7d2dcfb160 | p@chr13:94958004..94958025, + |
| 5.04e-34 | FFCP PHASE1:Hg19::chr17:7414798..7414809,+#_fc95e4c4c73f35e1e775bc11ebec5a6c | p@chr17:7414798..7414809, + |
| 5.04e-34 | FFCP PHASE2:Hg19::chr17:7414798..7414809,+#_fc95e4c4c73f35e1e775bc11ebec5a6c | p@chr17:7414798..7414809, + |
| 6.27e-32 | FFCP PHASE2:Hg19::chr15:35731807..35731812,+#_2c94cf2b3c1d4ffdfccba2cb9a286df2 | p@chr15:35731807..35731812, + |
| 6.27e-32 | FFCP PHASE1:Hg19::chr15:35731807..35731812,+#_2c94cf2b3c1d4ffdfccba2cb9a286df2 | p@chr15:35731807..35731812, + |
| 5.56e-26 | FFCP PHASE1:Hg19::chr12:48147711..48147719,+#_67ef61157e69315181c317c8194c4ad1 | p19@SLC48A1 |
| 5.56e-26 | FFCP PHASE2:Hg19::chr12:48147711..48147719,+#_67ef61157e69315181c317c8194c4ad1 | p19@SLC48A1 |
| 4.66e-21 | FFCP PHASE1:Hg19::chr7:47622108..47622117,-#_44a8a0d694fd4616280b3673b67e9ecc | p33@TNS3 |
| 4.66e-21 | FFCP PHASE2:Hg19::chr7:47622108..47622117,-#_44a8a0d694fd4616280b3673b67e9ecc | p33@TNS3 |
| 5.7e-21 | FFCP PHASE1:Hg19::chr3:44771012..44771024,-#_a77617d9eb7258938b27dec56b7421db | p@chr3:44771012..44771024, - |
| 5.7e-21 | FFCP PHASE2:Hg19::chr3:44771012..44771024,-#_a77617d9eb7258938b27dec56b7421db | p@chr3:44771012..44771024, - |
| 2.05e-20 | FFCP PHASE2:Hg19::chr3:170459156..170459176,-#_aeda7307c5f60ecc70d6fc682573046f | p3@ENST00000473110 |
| 2.05e-20 | FFCP PHASE1:Hg19::chr3:170459156..170459176,-#_aeda7307c5f60ecc70d6fc682573046f | p3@ENST00000473110 |
| 1.8e-19 | FFCP PHASE1:Hg19::chr3:170459205..170459216,-#_40c841a34f081556ed8f2ea7ecd08d3c | p2@ENST00000473110 |
| 1.8e-19 | FFCP PHASE2:Hg19::chr3:170459205..170459216,-#_40c841a34f081556ed8f2ea7ecd08d3c | p2@ENST00000473110 |
| 9.18e-19 | FFCP PHASE1:Hg19::chr5:167070346..167070350,+#_6d829add80c6b688805e46db18deda3b | p@chr5:167070346..167070350, + |
| 9.18e-19 | FFCP PHASE2:Hg19::chr5:167070346..167070350,+#_6d829add80c6b688805e46db18deda3b | p@chr5:167070346..167070350, + |
| 6.48e-18 | FFCP PHASE1:Hg19::chr12:57623787..57623800,+#_58677c6b4d1b2abc375637eacc734bb6 | p27@SHMT2 |
| 6.48e-18 | FFCP PHASE2:Hg19::chr12:57623787..57623800,+#_58677c6b4d1b2abc375637eacc734bb6 | p27@SHMT2 |
| 7.67e-18 | FFCP PHASE1:Hg19::chr10:44340825..44340831,+#_3d13023420b706ba88f7e688ae59e080 | p2@C10orf136 |
| 7.67e-18 | FFCP PHASE2:Hg19::chr10:44340825..44340831,+#_3d13023420b706ba88f7e688ae59e080 | p2@C10orf136 |
| 2.25e-17 | FFCP PHASE1:Hg19::chr5:76115392..76115407,-#_54c19936bd411f2f3cf2035c90ea07d6 | p@chr5:76115392..76115407, - |
| 2.25e-17 | FFCP PHASE2:Hg19::chr5:76115392..76115407,-#_54c19936bd411f2f3cf2035c90ea07d6 | p@chr5:76115392..76115407, - |
| 2.44e-17 | FFCP PHASE1:Hg19::chr6:31763634..31763645,-#_7dff3fe7b5f55eb5d37e646cfabceb23 | p11@VARS |
| 2.44e-17 | FFCP PHASE2:Hg19::chr6:31763634..31763645,-#_7dff3fe7b5f55eb5d37e646cfabceb23 | p11@VARS |
| 2.03e-16 | FFCP PHASE1:Hg19::chr11:15145622..15145653,+#_1c76525cddded91a1dc939c0fd341fee | p@chr11:15145622..15145653, + |
| 2.03e-16 | FFCP PHASE2:Hg19::chr11:15145622..15145653,+#_1c76525cddded91a1dc939c0fd341fee | p@chr11:15145622..15145653, + |
| 1.54e-15 | FFCP PHASE1:Hg19::chr7:45025647..45025665,-#_3e53df68af3ede6a32fe090877f58404 | p@chr7:45025647..45025665, - |
| 1.54e-15 | FFCP PHASE2:Hg19::chr7:45025647..45025665,-#_3e53df68af3ede6a32fe090877f58404 | p@chr7:45025647..45025665, - |
| 1.78e-15 | FFCP PHASE1:Hg19::chr1:228270912..228270924,+#_5113f946015d90844f1a17aa4081c27d | p29@ARF1 |
| 1.78e-15 | FFCP PHASE2:Hg19::chr1:228270912..228270924,+#_5113f946015d90844f1a17aa4081c27d | p29@ARF1 |
| 1.78e-15 | FFCP PHASE1:Hg19::chr7:72993033..72993041,-#_5113f946015d90844f1a17aa4081c27d | p3@TBL2 |
| 1.78e-15 | FFCP PHASE2:Hg19::chr7:72993033..72993041,-#_5113f946015d90844f1a17aa4081c27d | p3@TBL2 |
| 1.78e-15 | FFCP PHASE1:Hg19::chr18:66451542..66451549,-#_5113f946015d90844f1a17aa4081c27d | p@chr18:66451542..66451549, - |
| 1.78e-15 | FFCP PHASE2:Hg19::chr18:66451542..66451549,-#_5113f946015d90844f1a17aa4081c27d | p@chr18:66451542..66451549, - |
| 2.05e-15 | FFCP PHASE1:Hg19::chr2:204672850..204672854,-#_702dc5e0bfafbfef007260b90ea73248 | p@chr2:204672850..204672854, - |
| 2.05e-15 | FFCP PHASE2:Hg19::chr2:204672850..204672854,-#_702dc5e0bfafbfef007260b90ea73248 | p@chr2:204672850..204672854, - |
| 3.22e-15 | FFCP PHASE1:Hg19::chr5:141825669..141825676,-#_2d99578b2aac98070d3a56eae5b0a61d | p@chr5:141825669..141825676, - |
| 3.22e-15 | FFCP PHASE2:Hg19::chr5:141825669..141825676,-#_2d99578b2aac98070d3a56eae5b0a61d | p@chr5:141825669..141825676, - |
| 1.57e-14 | FFCP PHASE1:Hg19::chr17:46670037..46670060,-#_ba6c73982a96ebb3c219f0127be8e34e | p3@HOXB5 |
| 1.57e-14 | FFCP PHASE2:Hg19::chr17:46670037..46670060,-#_ba6c73982a96ebb3c219f0127be8e34e | p3@HOXB5 |
| 1.89e-14 | FFCP PHASE1:Hg19::chr2:238334021..238334052,-#_6b627a02a6f78dc0fb5ab8b13bdcba44 | p1@ENST00000409162 |
| 1.89e-14 | FFCP PHASE2:Hg19::chr2:238334021..238334052,-#_6b627a02a6f78dc0fb5ab8b13bdcba44 | p1@ENST00000409162 |
| 7.3e-14 | FFCP PHASE1:Hg19::chr5:142000713..142000743,-#_84a5b7a9bc4b890481c8bc4c25262fd8 | p@chr5:142000713..142000743, - |
| 7.3e-14 | FFCP PHASE2:Hg19::chr5:142000713..142000743,-#_84a5b7a9bc4b890481c8bc4c25262fd8 | p@chr5:142000713..142000743, - |
| 7.3e-14 | FFCP PHASE1:Hg19::chr17:7415524..7415538,+#_84a5b7a9bc4b890481c8bc4c25262fd8 | p@chr17:7415524..7415538, + |
| 7.3e-14 | FFCP PHASE2:Hg19::chr17:7415524..7415538,+#_84a5b7a9bc4b890481c8bc4c25262fd8 | p@chr17:7415524..7415538, + |
| 1.21e-13 | FFCP PHASE1:Hg19::chr4:13546130..13546145,-#_188eeba07897d1f4766f2a5be77ee428 | p4@NKX3-2 |
| 1.21e-13 | FFCP PHASE2:Hg19::chr4:13546130..13546145,-#_188eeba07897d1f4766f2a5be77ee428 | p4@NKX3-2 |
| 1.37e-13 | FFCP PHASE1:Hg19::chr6:109761883..109761892,+#_e7988f6694a32fa8ad6433bc03d54f7c | p5@SMPD2 |
| 1.37e-13 | FFCP PHASE2:Hg19::chr6:109761883..109761892,+#_e7988f6694a32fa8ad6433bc03d54f7c | p5@SMPD2 |
| 2.49e-13 | FFCP PHASE2:Hg19::chr4:151503541..151503558,+#_e6282e56fe339d724350b832b2e443a3 | p5@MAB21L2 |
| 2.49e-13 | FFCP PHASE1:Hg19::chr4:151503541..151503558,+#_e6282e56fe339d724350b832b2e443a3 | p5@MAB21L2 |
| 2.91e-13 | FFCP PHASE1:Hg19::chr12:54402694..54402705,+#_1e9140c31e34f403e3967ace9c38db7c | p5@HOXC8 |
| 2.91e-13 | FFCP PHASE2:Hg19::chr12:54402694..54402705,+#_1e9140c31e34f403e3967ace9c38db7c | p5@HOXC8 |
| 3.46e-13 | FFCP PHASE1:Hg19::chr6:39788965..39788976,+#_af2a5f3a6c2d14499db8b5fc030a9061 | p@chr6:39788965..39788976, + |
| 3.46e-13 | FFCP PHASE2:Hg19::chr6:39788965..39788976,+#_af2a5f3a6c2d14499db8b5fc030a9061 | p@chr6:39788965..39788976, + |
| 1.08e-12 | FFCP PHASE1:Hg19::chr5:92920719..92920744,+#_d81d0474101b756fde43a73a5bd29e62 | p17@NR2F1, p31@NR2F2 |
| 1.08e-12 | FFCP PHASE2:Hg19::chr5:92920719..92920744,+#_d81d0474101b756fde43a73a5bd29e62 | p17@NR2F1, p31@NR2F2 |
| 1.41e-12 | FFCP PHASE1:Hg19::chr1:68851155..68851158,+#_ead6f0b594711398d26c4f929cb9f971 | p@chr1:68851155..68851158, + |
| 1.41e-12 | FFCP PHASE2:Hg19::chr1:68851155..68851158,+#_ead6f0b594711398d26c4f929cb9f971 | p@chr1:68851155..68851158, + |
| 1.49e-12 | FFCP PHASE2:Hg19::chr21:47421213..47421229,+#_da3b362a1b897a3443264664b2edda7b | p26@COL6A1 |
| 1.49e-12 | FFCP PHASE1:Hg19::chr21:47421213..47421229,+#_da3b362a1b897a3443264664b2edda7b | p26@COL6A1 |
| 2.32e-12 | FFCP PHASE1:Hg19::chr16:2029725..2029730,-#_93fc9f63ae507a36d59746320e8e064b | p@chr16:2029725..2029730, - |
| 2.32e-12 | FFCP PHASE2:Hg19::chr16:2029725..2029730,-#_93fc9f63ae507a36d59746320e8e064b | p@chr16:2029725..2029730, - |
| 2.7e-12 | FFCP PHASE1:Hg19::chr5:148521381..148521388,+#_41128cb5478646c7954bdb98800be2da | p6@ABLIM3 |
| 2.7e-12 | FFCP PHASE2:Hg19::chr5:148521381..148521388,+#_41128cb5478646c7954bdb98800be2da | p6@ABLIM3 |
| 3.01e-12 | FFCP PHASE1:Hg19::chr12:7045321..7045337,+#_5a56e222345d39c90c8653745f996105 | p16@ATN1 |
| 3.01e-12 | FFCP PHASE2:Hg19::chr12:7045321..7045337,+#_5a56e222345d39c90c8653745f996105 | p16@ATN1 |
| 4.16e-12 | FFCP PHASE1:Hg19::chr17:46627597..46627646,+#_f9d31770f21d2de6b40a39e7a1543bfe | p@chr17:46627597..46627646, + |
| 4.16e-12 | FFCP PHASE2:Hg19::chr17:46627597..46627646,+#_f9d31770f21d2de6b40a39e7a1543bfe | p@chr17:46627597..46627646, + |
| 5.07e-12 | FFCP PHASE2:Hg19::chr5:78806209..78806210,+#_cecc17456c65f30f14b330e77f9186d6 | p1@ENST00000482584 |
| 5.07e-12 | FFCP PHASE1:Hg19::chr5:78806209..78806210,+#_cecc17456c65f30f14b330e77f9186d6 | p1@ENST00000482584 |
| 1.38e-11 | FFCP PHASE2:Hg19::chr8:69770351..69770355,-#_bca64e52c49eb026189f398c25eeb2fd | p@chr8:69770351..69770355, - |
| 1.38e-11 | FFCP PHASE1:Hg19::chr8:69770351..69770355,-#_bca64e52c49eb026189f398c25eeb2fd | p@chr8:69770351..69770355, - |
| 1.55e-11 | FFCP PHASE1:Hg19::chr9:136581203..136581243,-#_3a33390ad4aaa813f03cdfe07af70809 | p@chr9:136581203..136581243, - |
| 1.55e-11 | FFCP PHASE2:Hg19::chr9:136581203..136581243,-#_3a33390ad4aaa813f03cdfe07af70809 | p@chr9:136581203..136581243, - |
| 1.79e-11 | FFCP PHASE1:Hg19::chr10:101292684..101292706,+#_2e0dec5832932bb5cabd49c6b31b9e86 | p1@NKX2-3 |
| 1.79e-11 | FFCP PHASE2:Hg19::chr10:101292684..101292706,+#_2e0dec5832932bb5cabd49c6b31b9e86 | p1@NKX2-3 |
| 2.23e-11 | FFCP PHASE1:Hg19::chr19:19675738..19675742,-#_a563f73f5b53bcefc256a57f72b57de0 | p@chr19:19675738..19675742, - |
| 2.23e-11 | FFCP PHASE2:Hg19::chr19:19675738..19675742,-#_a563f73f5b53bcefc256a57f72b57de0 | p@chr19:19675738..19675742, - |
| 2.28e-11 | FFCP PHASE1:Hg19::chr17:46670939..46670958,-#_b00c849f96f741ad552d0907e8c921a6 | p5@AB464575 |
| 2.28e-11 | FFCP PHASE2:Hg19::chr17:46670939..46670958,-#_b00c849f96f741ad552d0907e8c921a6 | p5@AB464575 |
| 2.41e-11 | FFCP PHASE1:Hg19::chr15:79296506..79296528,-#_330b26a604a36d79cdc7fe5b3e404e92 | p@chr15:79296506..79296528, - |
| 2.41e-11 | FFCP PHASE2:Hg19::chr15:79296506..79296528,-#_330b26a604a36d79cdc7fe5b3e404e92 | p@chr15:79296506..79296528, - |
| 2.47e-11 | FFCP PHASE1:Hg19::chr2:68407438..68407452,-#_5433be967271bf777a6419ff37fadb23 | p@chr2:68407438..68407452, - |
| 2.47e-11 | FFCP PHASE2:Hg19::chr2:68407438..68407452,-#_5433be967271bf777a6419ff37fadb23 | p@chr2:68407438..68407452, - |
| 2.47e-11 | FFCP PHASE1:Hg19::chr8:97173993..97174018,-#_5433be967271bf777a6419ff37fadb23 | p@chr8:97173993..97174018, - |
| 2.47e-11 | FFCP PHASE2:Hg19::chr8:97173993..97174018,-#_5433be967271bf777a6419ff37fadb23 | p@chr8:97173993..97174018, - |
| 2.59e-11 | FFCP PHASE1:Hg19::chr8:12945992..12945996,-#_1d9f91585499e3f4cc80270dd6c1e6d0 | p25@DLC1 |
| 2.59e-11 | FFCP PHASE2:Hg19::chr8:12945992..12945996,-#_1d9f91585499e3f4cc80270dd6c1e6d0 | p25@DLC1 |
| 2.73e-11 | FFCP PHASE1:Hg19::chr17:13505472..13505501,+#_ce8f34a820a7435fdd5779ec579a7fef | p@chr17:13505472..13505501, + |
| 2.73e-11 | FFCP PHASE2:Hg19::chr17:13505472..13505501,+#_ce8f34a820a7435fdd5779ec579a7fef | p@chr17:13505472..13505501, + |
| 2.73e-11 | FFCP PHASE2:Hg19::chr2:37938667..37938670,-#_ce8f34a820a7435fdd5779ec579a7fef | p@chr2:37938667..37938670, - |
| 2.73e-11 | FFCP PHASE1:Hg19::chr12:30949271..30949292,+#_ce8f34a820a7435fdd5779ec579a7fef | p@chr12:30949271..30949292, + |
