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Coexpression cluster:C41: Difference between revisions

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{{Coexpression_clusters
{{Coexpression_clusters
|full_id=C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal
|full_id=C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal
|gostat_on_coexpression_clusters=GO:0007601!visual perception!9.81064457375546e-31!2916;5145;9227;24;83552;3983;2570;5959;2779;5470;6295;6121;7439;57010;9187;2986;60506;6017;5306;5995;314;5080;9094;10692$GO:0050953!sensory perception of light stimulus!9.81064457375546e-31!2916;5145;9227;24;83552;3983;2570;5959;2779;5470;6295;6121;7439;57010;9187;2986;60506;6017;5306;5995;314;5080;9094;10692$GO:0032501!multicellular organismal process!3.08510962248049e-22!4233;24;57453;5959;8997;2779;6295;6121;351;2487;5308;9187;5306;9132;314;5080;10692;5145;2916;9227;2562;83552;3983;2570;3685;4004;6525;5470;1297;7439;57010;1131;9271;2986;60506;6017;5995;1638;9094$GO:0007600!sensory perception!3.26189058192588e-17!2916;5145;9227;24;83552;3983;2570;5959;2779;5470;6295;6121;7439;57010;9187;2986;60506;6017;5306;9132;5995;314;5080;9094;10692$GO:0003008!system process!1.26111358163529e-16!2916;5145;9227;24;83552;2562;3983;2570;6525;5959;2779;5470;6295;6121;351;7439;57010;1131;9187;2986;60506;6017;5306;9132;5995;314;5080;9094;10692$GO:0050877!neurological system process!1.26111358163529e-16!2916;5145;9227;24;83552;2562;3983;2570;5959;2779;5470;6295;6121;351;7439;57010;9187;2986;60506;6017;5306;9132;5995;314;5080;9094;10692$GO:0044459!plasma membrane part!1.78753219018382e-10!1183;4233;2916;24;2562;2570;3685;23539;1136;4308;351;7439;4921;1131;9187;2791;2986;54716;9132;6540;5995;10692$GO:0005887!integral to plasma membrane!3.48236554855786e-09!1183;4233;2916;24;2562;2570;3685;23539;1136;4308;351;4921;1131;9187;2986;54716;9132;6540;5995;10692$GO:0031226!intrinsic to plasma membrane!3.82694137065199e-09!1183;4233;2916;24;2562;2570;3685;23539;1136;4308;351;4921;1131;9187;2986;54716;9132;6540;5995;10692$GO:0005886!plasma membrane!1.10604557177807e-08!1183;4233;2916;5145;24;6975;2562;2570;3685;23539;4685;1136;4308;6121;351;7439;4921;1131;9187;2791;2986;54716;54831;9132;6540;5995;387700;10692$GO:0009584!detection of visible light!1.14514516990045e-08!6295;2916;24;5995;2779;9094$GO:0009583!detection of light stimulus!1.21800691734385e-08!6295;2916;24;5995;2779;9094$GO:0016020!membrane!1.21800691734385e-08!1183;4233;287;24;23065;118;80036;57453;4685;5959;127579;4308;9848;9356;6121;351;2487;149095;9187;89795;2791;54831;6579;9132;387700;10692;221074;5145;2916;9227;6975;2562;83552;2570;57835;284439;3685;23539;1136;4921;7439;9271;1131;2800;3098;2986;54716;6540;5995;1638$GO:0051606!detection of stimulus!5.28086257607399e-08!6295;2916;24;5995;2779;5470;9094$GO:0009416!response to light stimulus!5.38462326854317e-08!6295;2916;24;5995;9187;2779;9094$GO:0009582!detection of abiotic stimulus!5.65792470998684e-08!6295;2916;24;5995;2779;9094$GO:0050906!detection of stimulus during sensory perception!6.11213327574056e-08!6295;24;5995;2779;5470;9094$GO:0009581!detection of external stimulus!9.71823187771387e-08!6295;2916;24;5995;2779;9094$GO:0016021!integral to membrane!1.18976350754503e-07!1183;4233;24;23065;80036;57453;4685;127579;4308;9848;9356;351;149095;9187;54831;6579;9132;387700;10692;221074;2916;9227;2562;83552;2570;57835;3685;284439;1136;23539;4921;7439;1131;2986;54716;6540;5995;1638$GO:0031224!intrinsic to membrane!1.37309308415663e-07!1183;4233;24;23065;80036;57453;4685;127579;4308;9848;9356;351;149095;9187;54831;6579;9132;387700;10692;221074;2916;9227;2562;83552;2570;57835;3685;284439;1136;23539;4921;7439;1131;2986;54716;6540;5995;1638$GO:0009314!response to radiation!1.83030242100536e-07!6295;2916;24;5995;9187;2779;9094$GO:0051179!localization!2.5065367989969e-07!221074;1183;4233;24;2562;2570;80036;57835;284439;23539;1136;8997;4308;9356;351;7439;1297;57010;9187;54716;6017;54831;5306;6579;9132;6540;387700;114902;5080$GO:0044425!membrane part!2.61038036091781e-07!1183;4233;24;23065;80036;57453;4685;127579;4308;9848;9356;351;149095;9187;89795;2791;54831;6579;9132;387700;10692;221074;2916;9227;2562;83552;2570;57835;284439;3685;1136;23539;4921;7439;1131;3098;2986;54716;6540;5995;1638$GO:0022857!transmembrane transporter activity!2.74197624924218e-07!221074;1183;24;2562;2570;80036;57835;1136;23539;4308;9356;7439;9187;54716;54831;9132;6579;6540;387700$GO:0007602!phototransduction!2.87293679057931e-07!6295;24;5995;2779;9094$GO:0050962!detection of light stimulus during sensory perception!3.74486102475781e-07!6295;24;5995;2779;9094$GO:0050908!detection of light stimulus during visual perception!3.74486102475781e-07!6295;24;5995;2779;9094$GO:0006811!ion transport!5.92245011953541e-07!221074;1183;9356;1297;7439;2562;9187;2570;80036;57835;54831;6579;9132;1136;23539;114902;4308$GO:0022892!substrate-specific transporter activity!7.77852834846723e-07!221074;1183;24;2562;2570;80036;57835;23539;1136;4308;9356;7439;9187;54716;5306;54831;9132;6579;6540$GO:0006810!transport!1.75099921659154e-06!221074;1183;24;2562;2570;80036;57835;284439;23539;1136;8997;4308;9356;351;7439;1297;9187;54716;6017;54831;5306;6579;9132;6540;114902;387700$GO:0015075!ion transmembrane transporter activity!2.18226246992338e-06!221074;1183;9356;7439;2562;9187;2570;80036;57835;54716;54831;6579;9132;6540;1136;4308$GO:0022891!substrate-specific transmembrane transporter activity!2.48960658892293e-06!221074;1183;9356;7439;2562;9187;2570;80036;57835;54716;54831;6579;9132;6540;1136;23539;4308$GO:0051234!establishment of localization!3.37262948252363e-06!221074;1183;24;2562;2570;80036;57835;284439;23539;1136;8997;4308;9356;351;7439;1297;9187;54716;6017;54831;5306;6579;9132;6540;114902;387700$GO:0009628!response to abiotic stimulus!3.37262948252363e-06!6295;2916;24;5995;9187;2779;9094$GO:0031404!chloride ion binding!7.22496996755269e-06!1183;54831;7439;2562;2570$GO:0043168!anion binding!7.22496996755269e-06!1183;54831;7439;2562;2570$GO:0000267!cell fraction!3.39085306567683e-05!6295;1183;4233;7439;24;9187;6017;9132;23539;1638;9094;4308$GO:0044464!cell part!7.74935097155196e-05!1183;287;24;8470;80036;57453;4685;58538;4308;6121;351;149095;23063;11240;89795;2791;54831;6579;387700;10692;221074;10556;2916;9227;6975;3983;57835;23539;6525;7439;4921;57010;9271;1131;9219;54716;6017;9094;4233;23065;118;127579;8997;5959;9848;6295;2487;9356;5308;9187;27044;5306;9132;5080;5145;2562;83552;2570;3685;4004;284439;1136;1297;5451;3098;2800;2986;60506;11170;5995;6540;114902;1638$GO:0006776!vitamin A metabolic process!0.000113042067013674!6121;6017;9227$GO:0006775!fat-soluble vitamin metabolic process!0.000196630872701977!6121;6017;9227$GO:0008509!anion transmembrane transporter activity!0.000213168768062022!57835;1183;7439;6579;2562;2570$GO:0006820!anion transport!0.000236212476668935!57835;1183;1297;7439;6579;23539;114902$GO:0043195!terminal button!0.000571118476344432!57010;2562$GO:0033267!axon part!0.000571118476344432!57010;2562$GO:0005216!ion channel activity!0.000640543268030827!1183;7439;2562;2570;80036;54831;9132;1136;4308$GO:0005624!membrane fraction!0.000640982667833571!1183;4233;7439;24;9132;23539;9187;1638;4308$GO:0022838!substrate specific channel activity!0.000671170630792134!1183;7439;2562;2570;80036;54831;9132;1136;4308$GO:0022803!passive transmembrane transporter activity!0.000697600840236669!1183;7439;2562;2570;80036;54831;9132;1136;4308$GO:0015267!channel activity!0.000697600840236669!1183;7439;2562;2570;80036;54831;9132;1136;4308$GO:0005254!chloride channel activity!0.000697600840236669!1183;7439;2562;2570$GO:0016323!basolateral plasma membrane!0.000787400292004814!4233;7439;9132;1131$GO:0007275!multicellular organismal development!0.00114432280767387!4233;2487;1297;5308;9271;83552;1131;3983;4004;57453;3685;6525;8997;5080;1638$GO:0019867!outer membrane!0.00121832200935113!9187;89795;3098;2986$GO:0005253!anion channel activity!0.00140117869902976!1183;7439;2562;2570$GO:0042461!photoreceptor cell development!0.00211882511925589!6121;5080$GO:0015291!secondary active transmembrane transporter activity!0.00314933029047855!57835;54716;6540;23539;9187;387700$GO:0046530!photoreceptor cell differentiation!0.00327547442681604!6121;5080$GO:0048856!anatomical structure development!0.00372423861523655!6121;4233;2487;1297;5308;1131;3983;57453;3685;11170;6525;8997;5080;1638$GO:0015293!symporter activity!0.00379722704385757!54716;6540;23539;9187;387700$GO:0005640!nuclear outer membrane!0.00379722704385757!89795;2986$GO:0030594!neurotransmitter receptor activity!0.0046305457777339!2562;1136;1131;2570$GO:0048513!organ development!0.00494388874763118!4233;2487;1297;5308;3983;57453;3685;6525;1638;5080$GO:0042165!neurotransmitter binding!0.00498385539098099!2562;1136;1131;2570$GO:0048731!system development!0.00522720437998141!4233;2487;1297;5308;1131;3983;57453;3685;6525;8997;5080;1638$GO:0032502!developmental process!0.00527176699239718!4233;83552;3983;4004;3685;57453;6525;8997;6121;351;2487;1297;5308;1131;9271;11170;1638;5080$GO:0045211!postsynaptic membrane!0.00527176699239718!2562;1136;1131;2570$GO:0044456!synapse part!0.00694711151701581!2562;1136;1131;2570$GO:0045178!basal part of cell!0.00704584335409783!4233;9132$GO:0015711!organic anion transport!0.00704584335409783!6579;23539$GO:0009925!basal plasma membrane!0.00704584335409783!4233;9132$GO:0005509!calcium ion binding!0.00769302195183634!6295;5322;7439;11240;57010;9187;80036;3685;54831;314;5470$GO:0015629!actin cytoskeleton!0.00776742014550554!287;6525;8997;3983;118$GO:0007166!cell surface receptor linked signal transduction!0.0107349223375345!6295;4233;2916;2487;351;4921;1131;2791;2570;2986;3685;5995;2779;10692$GO:0015464!acetylcholine receptor activity!0.0113398407270675!1136;1131$GO:0018298!protein-chromophore linkage!0.0113398407270675!5995;10692$GO:0022804!active transmembrane transporter activity!0.0113398407270675!57835;54716;24;6540;23539;9187;387700$GO:0006766!vitamin metabolic process!0.0113830076079591!6121;6017;9227$GO:0042166!acetylcholine binding!0.0120582613735087!1136;1131$GO:0031968!organelle outer membrane!0.013898647321435!89795;3098;2986$GO:0009887!organ morphogenesis!0.0170094158627189!57453;1297;5308;3983;5080$GO:0009953!dorsal/ventral pattern formation!0.0187450992181296!57453;5080$GO:0001709!cell fate determination!0.0187450992181296!57453;5080$GO:0021902!commitment of a neuronal cell to a specific type of neuron in the forebrain!0.0187450992181296!5080$GO:0051450!myoblast proliferation!0.0187450992181296!4233$GO:0015129!lactate transmembrane transporter activity!0.0187450992181296!23539$GO:0021877!forebrain neuron fate commitment!0.0187450992181296!5080$GO:0047173!phosphatidylcholine-retinol O-acyltransferase activity!0.0187450992181296!9227$GO:0015727!lactate transport!0.0187450992181296!23539$GO:0005008!hepatocyte growth factor receptor activity!0.0187450992181296!4233$GO:0009288!flagellin-based flagellum!0.0187450992181296!57010$GO:0033130!acetylcholine receptor binding!0.0187450992181296!351$GO:0048012!hepatocyte growth factor receptor signaling pathway!0.0187450992181296!4233$GO:0006649!phospholipid transfer to membrane!0.0187450992181296!24$GO:0009642!response to light intensity!0.0187450992181296!9187$GO:0005548!phospholipid transporter activity!0.0209281533410604!5306;24$GO:0005507!copper ion binding!0.0219957603073038!351;314;1638$GO:0019861!flagellum!0.0228745297614298!4233;57010$GO:0030424!axon!0.0228745297614298!57010;2562$GO:0007389!pattern specification process!0.0250956803577066!57453;5308;5080$GO:0001764!neuron migration!0.0250956803577066!4233;5080$GO:0000904!cellular morphogenesis during differentiation!0.025757485968105!57453;6121;5080$GO:0015698!inorganic anion transport!0.0263006760497974!1183;1297;7439;114902$GO:0005230!extracellular ligand-gated ion channel activity!0.0279803275485031!2562;1136;2570$GO:0006939!smooth muscle contraction!0.0279803275485031!1131;6525$GO:0004890!GABA-A receptor activity!0.0279803275485031!2562;2570$GO:0009605!response to external stimulus!0.02979352862017!6295;2916;24;5995;2779;9094$GO:0007420!brain development!0.0306076284339457!57453;4233;5080$GO:0021872!generation of neurons in the forebrain!0.0306076284339457!5080$GO:0021798!forebrain dorsal/ventral pattern formation!0.0306076284339457!5080$GO:0007468!regulation of rhodopsin gene expression!0.0306076284339457!6121$GO:0022612!gland morphogenesis!0.0306076284339457!5080$GO:0005502!11-cis retinal binding!0.0306076284339457!6017$GO:0021879!forebrain neuron differentiation!0.0306076284339457!5080$GO:0008525!phosphatidylcholine transmembrane transporter activity!0.0306076284339457!5306$GO:0007435!salivary gland morphogenesis!0.0306076284339457!5080$GO:0043176!amine binding!0.0319321797904677!1136;1131$GO:0008324!cation transmembrane transporter activity!0.0319321797904677!54716;9132;6540;1136;9187;80036;4308$GO:0044463!cell projection part!0.0355698893762162!57010;2562$GO:0016917!GABA receptor activity!0.0355698893762162!2562;2570$GO:0005328!neurotransmitter:sodium symporter activity!0.0397857995950336!54716;6540$GO:0004167!dopachrome isomerase activity!0.041246130335252!1638$GO:0008273!calcium, potassium:sodium antiporter activity!0.041246130335252!9187$GO:0005594!collagen type IX!0.041246130335252!1297$GO:0017147!Wnt-protein binding!0.041246130335252!2487$GO:0043288!apocarotenoid metabolic process!0.041246130335252!6121$GO:0042574!retinal metabolic process!0.041246130335252!6121$GO:0046873!metal ion transmembrane transporter activity!0.041246130335252!221074;9132;1136;80036;4308$GO:0005326!neurotransmitter transporter activity!0.041246130335252!54716;6540$GO:0019748!secondary metabolic process!0.041246130335252!6121;1638$GO:0022834!ligand-gated channel activity!0.041246130335252!2562;1136;2570$GO:0015276!ligand-gated ion channel activity!0.041246130335252!2562;1136;2570$GO:0022836!gated channel activity!0.042059685265673!1183;9132;2562;1136;2570
|id=C41
|id=C41
}}
}}

Revision as of 17:39, 18 May 2012


Full id: C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal



Phase1 CAGE Peaks

Hg19::chr10:101486926..101486931,-p@chr10:101486926..101486931
-
Hg19::chr10:101486934..101486945,-p@chr10:101486934..101486945
-
Hg19::chr10:104175989..104176008,-p1@CU691700
Hg19::chr10:104176135..104176160,+p@chr10:104176135..104176160
+
Hg19::chr10:114043157..114043159,+p1@TECTB
Hg19::chr10:115391404..115391443,-p1@AF005213
Hg19::chr10:116417993..116417999,-p53@ABLIM1
Hg19::chr10:116418028..116418040,-p39@ABLIM1
Hg19::chr10:116418053..116418062,-p49@ABLIM1
Hg19::chr10:16790377..16790390,-p@chr10:16790377..16790390
-
Hg19::chr10:16982072..16982089,-p@chr10:16982072..16982089
-
Hg19::chr10:18239620..18239637,+p@chr10:18239620..18239637
+
Hg19::chr10:18240753..18240760,+p12@SLC39A12
Hg19::chr10:45406662..45406696,+p3@TMEM72
Hg19::chr10:52337996..52338001,-p@chr10:52337996..52338001
-
Hg19::chr10:5686954..5686963,-p@chr10:5686954..5686963
-
Hg19::chr10:71038248..71038255,+p20@HK1
Hg19::chr10:7439708..7439749,-p@chr10:7439708..7439749
-
Hg19::chr10:81891416..81891433,+p4@PLAC9
Hg19::chr10:85990281..85990327,+p@chr10:85990281..85990327
+
Hg19::chr10:85990416..85990430,+p@chr10:85990416..85990430
+
Hg19::chr10:86004802..86004815,+p1@RGR
Hg19::chr10:88213488..88213506,-p6@WAPAL
Hg19::chr10:91295724..91295738,-p3@SLC16A12
Hg19::chr10:92654428..92654434,+p5@RPP30
Hg19::chr10:99531933..99531948,+p@chr10:99531933..99531948
+
Hg19::chr11:112043305..112043341,-p1@ENST00000527589
Hg19::chr11:117668248..117668250,-p5@DSCAML1
Hg19::chr11:117670683..117670690,+p1@CR627143
Hg19::chr11:119217318..119217346,-p2@MFRP
Hg19::chr11:119217405..119217420,-p3@C1QTNF5
p3@MFRP
Hg19::chr11:119217421..119217435,-p4@MFRP
p5@C1QTNF5
Hg19::chr11:119217442..119217445,-p5@MFRP
p6@C1QTNF5
Hg19::chr11:31825588..31825613,-p8@PAX6
Hg19::chr11:36218094..36218100,-p@chr11:36218094..36218100
-
Hg19::chr11:49364646..49364667,+p@chr11:49364646..49364667
+
Hg19::chr11:60919516..60919521,-p@chr11:60919516..60919521
-
Hg19::chr11:61717637..61717685,+p16@BEST1
Hg19::chr11:61717816..61717838,+p1@BEST1
Hg19::chr11:61717845..61717856,+p6@BEST1
Hg19::chr11:61730076..61730083,-p@chr11:61730076..61730083
-
Hg19::chr11:61730351..61730361,-p@chr11:61730351..61730361
-
Hg19::chr11:61849658..61849665,-p2@ENST00000524942
Hg19::chr11:61849788..61849798,-p1@ENST00000524942
Hg19::chr11:62368079..62368089,-p25@MTA2
Hg19::chr11:62368112..62368123,-p21@MTA2
Hg19::chr11:62752463..62752474,-p5@SLC22A6
Hg19::chr11:62752484..62752495,-p6@SLC22A6
Hg19::chr11:66485713..66485755,-p@chr11:66485713..66485755
-
Hg19::chr11:67222877..67222887,+p2@CABP4
Hg19::chr11:67222891..67222900,+p3@CABP4
Hg19::chr11:75194071..75194110,-p@chr11:75194071..75194110
-
Hg19::chr11:75217477..75217496,-p@chr11:75217477..75217496
-
Hg19::chr11:7904492..7904511,-p1@ENST00000527565
Hg19::chr11:7904519..7904534,-p1@ENST00000529488
p1@ENST00000533634
Hg19::chr11:8039975..8040016,+p@chr11:8039975..8040016
+
Hg19::chr11:8289428..8289466,+p@chr11:8289428..8289466
+
Hg19::chr11:8290343..8290354,-p4@LMO1
Hg19::chr12:124948217..124948234,-p@chr12:124948217..124948234
-
Hg19::chr12:130850855..130850892,+p6@PIWIL1
Hg19::chr12:133414836..133414850,-p@chr12:133414836..133414850
-
Hg19::chr12:208224..208235,+p@chr12:208224..208235
+
Hg19::chr12:208241..208257,+p@chr12:208241..208257
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Hg19::chr12:208274..208283,+p@chr12:208274..208283
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Hg19::chr12:208292..208304,+p@chr12:208292..208304
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Hg19::chr12:208313..208318,+p@chr12:208313..208318
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Hg19::chr12:21556479..21556486,-p9@SLCO1A2
Hg19::chr12:31393989..31394005,-p@chr12:31393989..31394005
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Hg19::chr12:31394009..31394033,-p@chr12:31394009..31394033
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Hg19::chr12:366980..366994,-p@chr12:366980..366994
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Hg19::chr12:371994..372008,-p1@SLC6A13
Hg19::chr12:50617968..50617971,-p@chr12:50617968..50617971
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Hg19::chr12:56114267..56114277,+p4@RDH5
Hg19::chr12:70590020..70590050,+p@chr12:70590020..70590050
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Hg19::chr12:78359973..78359982,+p34@NAV3
Hg19::chr12:78359984..78359998,+p19@NAV3
Hg19::chr12:78359999..78360035,+p13@NAV3
Hg19::chr12:78934441..78934474,-p1@ENST00000546865
p1@ENST00000547089
Hg19::chr13:47357038..47357046,-p@chr13:47357038..47357046
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Hg19::chr13:95131687..95131693,-p6@DCT
Hg19::chr13:95131717..95131724,-p5@DCT
Hg19::chr13:95131731..95131756,-p3@DCT
Hg19::chr13:99128143..99128148,-p@chr13:99128143..99128148
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Hg19::chr13:99128165..99128168,-p@chr13:99128165..99128168
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Hg19::chr13:99128180..99128186,-p@chr13:99128180..99128186
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Hg19::chr13:99135278..99135298,-p@chr13:99135278..99135298
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Hg19::chr13:99135420..99135443,-p@chr13:99135420..99135443
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Hg19::chr14:100138477..100138486,+p@chr14:100138477..100138486
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Hg19::chr14:104399247..104399283,+p@chr14:104399247..104399283
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Hg19::chr14:105345830..105345837,+p@chr14:105345830..105345837
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Hg19::chr14:105345852..105345881,+p@chr14:105345852..105345881
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Hg19::chr14:51299684..51299732,-p@chr14:51299684..51299732
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Hg19::chr14:64408132..64408139,+p@chr14:64408132..64408139
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Hg19::chr14:67998818..67998826,+p@chr14:67998818..67998826
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Hg19::chr14:95969361..95969368,-p@chr14:95969361..95969368
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Hg19::chr15:27184664..27184669,-p32@GABRB3
Hg19::chr15:27184703..27184727,-p16@GABRB3
Hg19::chr15:31339060..31339063,-p@chr15:31339060..31339063
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Hg19::chr15:31453298..31453308,-p5@TRPM1
Hg19::chr15:31453318..31453329,-p6@TRPM1
Hg19::chr15:31453344..31453356,-p3@TRPM1
Hg19::chr15:31453359..31453370,-p2@TRPM1
Hg19::chr15:42179064..42179072,-p@chr15:42179064..42179072
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Hg19::chr15:42179084..42179102,-p@chr15:42179084..42179102
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Hg19::chr15:48575603..48575610,-p@chr15:48575603..48575610
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Hg19::chr15:48575647..48575650,-p@chr15:48575647..48575650
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Hg19::chr15:48612433..48612463,+p@chr15:48612433..48612463
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Hg19::chr15:65407577..65407589,-p2@UBAP1L
Hg19::chr15:65843130..65843140,+p@chr15:65843130..65843140
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Hg19::chr15:65914251..65914254,+p15@SLC24A1
Hg19::chr15:65914260..65914312,+p2@SLC24A1
Hg19::chr15:66215099..66215102,-p@chr15:66215099..66215102
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Hg19::chr15:69850478..69850500,+p1@ENST00000558781
Hg19::chr15:69850503..69850506,+p3@ENST00000558781
Hg19::chr15:69850521..69850537,+p2@ENST00000558781
Hg19::chr15:72101231..72101241,+p@chr15:72101231..72101241
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Hg19::chr15:74494609..74494626,-p@chr15:74494609..74494626
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Hg19::chr15:78913628..78913657,-p6@CHRNA3
Hg19::chr15:81299370..81299410,+p7@C15orf26
Hg19::chr15:88561119..88561164,+p@chr15:88561119..88561164
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Hg19::chr15:89755034..89755041,-p@chr15:89755034..89755041
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Hg19::chr15:89762699..89762708,-p@chr15:89762699..89762708
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Hg19::chr15:89762718..89762731,-p@chr15:89762718..89762731
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Hg19::chr15:89764789..89764850,-p1@RLBP1
Hg19::chr15:93221485..93221496,-p@chr15:93221485..93221496
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Hg19::chr16:15833436..15833448,-p@chr16:15833436..15833448
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Hg19::chr16:15833473..15833478,-p@chr16:15833473..15833478
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Hg19::chr16:22756555..22756564,+p@chr16:22756555..22756564
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Hg19::chr16:3019976..3020001,-p@chr16:3019976..3020001
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Hg19::chr16:3020011..3020022,-p@chr16:3020011..3020022
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Hg19::chr16:58768865..58768888,-p@chr16:58768865..58768888
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Hg19::chr16:67563287..67563296,+p17@FAM65A
Hg19::chr16:71758602..71758604,-p2@PHLPP2
Hg19::chr16:84127617..84127624,-p@chr16:84127617..84127624
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Hg19::chr16:84228930..84228933,+p@chr16:84228930..84228933
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Hg19::chr16:84228935..84228942,+p@chr16:84228935..84228942
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Hg19::chr16:84228961..84228982,+p@chr16:84228961..84228982
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Hg19::chr16:84228983..84228993,+p@chr16:84228983..84228993
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Hg19::chr16:84228997..84229004,+p@chr16:84228997..84229004
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Hg19::chr16:88459579..88459585,+p@chr16:88459579..88459585
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Hg19::chr17:1418972..1418986,-p@chr17:1418972..1418986
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Hg19::chr17:1419057..1419061,-p@chr17:1419057..1419061
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Hg19::chr17:1420239..1420279,-p9@INPP5K
Hg19::chr17:1462005..1462010,-p@chr17:1462005..1462010
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Hg19::chr17:1463142..1463152,-p10@PITPNA
Hg19::chr17:1463153..1463158,-p11@PITPNA
Hg19::chr17:1463423..1463446,-p4@PITPNA
Hg19::chr17:1463500..1463509,-p7@PITPNA
Hg19::chr17:26876350..26876359,-p13@UNC119
Hg19::chr17:40996590..40996604,+p1@AOC2
Hg19::chr17:71283257..71283270,-p@chr17:71283257..71283270
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Hg19::chr17:73455795..73455806,+p@chr17:73455795..73455806
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Hg19::chr17:7640532..7640540,+p@chr17:7640532..7640540
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Hg19::chr17:7640544..7640553,+p@chr17:7640544..7640553
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Hg19::chr17:9822377..9822400,+p@chr17:9822377..9822400
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Hg19::chr18:21693710..21693728,+p@chr18:21693710..21693728
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Hg19::chr18:21697228..21697232,+p@chr18:21697228..21697232
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Hg19::chr18:335568..335604,+p@chr18:335568..335604
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Hg19::chr18:60729742..60729749,+p@chr18:60729742..60729749
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Hg19::chr18:60729754..60729761,+p@chr18:60729754..60729761
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Hg19::chr18:77826935..77826979,+p@chr18:77826935..77826979
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Hg19::chr19:12862486..12862519,+p2@BEST2
Hg19::chr19:12862604..12862625,+p1@BEST2
Hg19::chr19:17137781..17137792,-p6@CPAMD8
Hg19::chr19:19206747..19206758,+p4@SLC25A42
Hg19::chr19:20654392..20654407,-p@chr19:20654392..20654407
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Hg19::chr19:3483402..3483412,-p@chr19:3483402..3483412
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Hg19::chr19:3483423..3483444,-p@chr19:3483423..3483444
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Hg19::chr19:36550698..36550713,+p@chr19:36550698..36550713
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Hg19::chr19:39096941..39096954,-p@chr19:39096941..39096954
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Hg19::chr19:48514200..48514208,+p@chr19:48514200..48514208
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Hg19::chr19:48564699..48564702,+p@chr19:48564699..48564702
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Hg19::chr19:48957683..48957699,+p@chr19:48957683..48957699
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Hg19::chr19:48957720..48957735,+p@chr19:48957720..48957735
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Hg19::chr19:48985691..48985704,+p@chr19:48985691..48985704
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Hg19::chr19:54940475..54940482,+p@chr19:54940475..54940482
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Hg19::chr19:54963128..54963155,+p16@LENG8
Hg19::chr19:54963159..54963179,+p17@LENG8
Hg19::chr19:54963189..54963198,+p39@LENG8
Hg19::chr1:145103709..145103716,+p@chr1:145103709..145103716
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Hg19::chr1:145103731..145103743,+p@chr1:145103731..145103743
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Hg19::chr1:150814885..150814904,-p@chr1:150814885..150814904
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Hg19::chr1:153476496..153476503,+p@chr1:153476496..153476503
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Hg19::chr1:155006254..155006259,-p4@DCST2
Hg19::chr1:155006382..155006409,+p1@DCST1
Hg19::chr1:160147296..160147342,-p@chr1:160147296..160147342
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Hg19::chr1:162601774..162601792,+p13@DDR2
Hg19::chr1:167297837..167297846,+p15@POU2F1
Hg19::chr1:17401839..17401849,-p4@PADI2
Hg19::chr1:174187216..174187227,+p@chr1:174187216..174187227
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Hg19::chr1:174187279..174187285,+p@chr1:174187279..174187285
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Hg19::chr1:180875711..180875729,+p1@ENST00000434447
Hg19::chr1:180897445..180897460,-p@chr1:180897445..180897460
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Hg19::chr1:1910241..1910262,+p@chr1:1910241..1910262
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Hg19::chr1:19567606..19567625,-p4@KIAA0090
Hg19::chr1:203463245..203463294,+p1@OPTC
Hg19::chr1:203466157..203466165,-p@chr1:203466157..203466165
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Hg19::chr1:203466166..203466175,+p@chr1:203466166..203466175
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Hg19::chr1:203467876..203467881,+p@chr1:203467876..203467881
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Hg19::chr1:20396606..20396616,+p9@PLA2G5
Hg19::chr1:21873823..21873846,+p@chr1:21873823..21873846
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Hg19::chr1:222411720..222411725,-p@chr1:222411720..222411725
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Hg19::chr1:222411765..222411774,-p@chr1:222411765..222411774
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Hg19::chr1:230931307..230931317,-p1@ENST00000412344
Hg19::chr1:239882791..239882794,+p25@CHRM3
Hg19::chr1:239882823..239882838,+p14@CHRM3
Hg19::chr1:24337003..24337016,+p@chr1:24337003..24337016
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Hg19::chr1:2985420..2985438,-p1@ENST00000445317
Hg19::chr1:2986044..2986062,-p@chr1:2986044..2986062
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Hg19::chr1:41249513..41249524,+p7@KCNQ4
Hg19::chr1:41249539..41249550,+p4@KCNQ4
Hg19::chr1:44265295..44265345,+p@chr1:44265295..44265345
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Hg19::chr1:53990536..53990551,-p@chr1:53990536..53990551
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Hg19::chr1:68910286..68910291,-p@chr1:68910286..68910291
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Hg19::chr1:68914484..68914492,-p@chr1:68914484..68914492
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Hg19::chr1:68915610..68915645,-p1@RPE65
Hg19::chr1:68915752..68915778,-p2@RPE65
Hg19::chr1:85062101..85062103,-p@chr1:85062101..85062103
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Hg19::chr1:85062226..85062238,-p@chr1:85062226..85062238
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Hg19::chr1:94564624..94564635,-p@chr1:94564624..94564635
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Hg19::chr1:94586634..94586639,-p5@ABCA4
Hg19::chr1:94586651..94586733,-p1@ABCA4
Hg19::chr20:43019208..43019216,+p@chr20:43019208..43019216
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Hg19::chr20:44985718..44985731,-p@chr20:44985718..44985731
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Hg19::chr20:4844065..4844071,-p@chr20:4844065..4844071
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Hg19::chr20:4844111..4844119,-p@chr20:4844111..4844119
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Hg19::chr20:4904851..4904855,-p@chr20:4904851..4904855
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Hg19::chr20:4930589..4930596,-p@chr20:4930589..4930596
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Hg19::chr20:4930601..4930623,-p@chr20:4930601..4930623
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Hg19::chr20:4930636..4930639,-p@chr20:4930636..4930639
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Hg19::chr20:4930846..4930857,-p@chr20:4930846..4930857
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Hg19::chr20:59205902..59205911,+p1@ENST00000506383
Hg19::chr20:61945446..61945460,+p@chr20:61945446..61945460
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Hg19::chr20:61945487..61945507,+p@chr20:61945487..61945507
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Hg19::chr21:22836033..22836079,+p5@NCAM2
Hg19::chr21:22836093..22836104,+p9@NCAM2
Hg19::chr21:27425876..27425885,-p71@APP
Hg19::chr21:27425889..27425898,-p73@APP
Hg19::chr21:41239545..41239554,+p@chr21:41239545..41239554
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Hg19::chr21:41241386..41241401,-p@chr21:41241386..41241401
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Hg19::chr21:45359786..45359789,+p@chr21:45359786..45359789
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Hg19::chr21:45360064..45360071,+p@chr21:45360064..45360071
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Hg19::chr21:45724035..45724045,+p@chr21:45724035..45724045
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Hg19::chr21:45724075..45724081,+p@chr21:45724075..45724081
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Hg19::chr21:46767473..46767491,+p@chr21:46767473..46767491
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Hg19::chr21:46767506..46767521,+p@chr21:46767506..46767521
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Hg19::chr22:17747518..17747523,-p1@CECR3
Hg19::chr22:22763019..22763029,-p@chr22:22763019..22763029
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Hg19::chr22:22763133..22763140,+p@chr22:22763133..22763140
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Hg19::chr22:31488368..31488377,+p47@SMTN
Hg19::chr22:31488433..31488441,+p36@SMTN
Hg19::chr22:38160057..38160063,-p@chr22:38160057..38160063
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Hg19::chr22:38480132..38480159,-p1@SLC16A8
Hg19::chr22:38480186..38480193,-p3@SLC16A8
Hg19::chr2:132795443..132795476,-p2@ENST00000450396
Hg19::chr2:137111294..137111297,+p@chr2:137111294..137111297
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Hg19::chr2:137111329..137111339,+p@chr2:137111329..137111339
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Hg19::chr2:14541060..14541085,-p1@LINC00276
Hg19::chr2:14541099..14541107,-p2@LINC00276
Hg19::chr2:183731882..183731896,-p1@FRZB
Hg19::chr2:187383262..187383270,+p@chr2:187383262..187383270
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Hg19::chr2:187454391..187454402,+p8@ITGAV
Hg19::chr2:187477939..187477960,+p@chr2:187477939..187477960
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Hg19::chr2:187478008..187478021,+p@chr2:187478008..187478021
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Hg19::chr2:202563379..202563412,-p3@MPP4
Hg19::chr2:202563414..202563426,-p6@MPP4
Hg19::chr2:209251601..209251612,+p@chr2:209251601..209251612
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Hg19::chr2:211532771..211532777,+p@chr2:211532771..211532777
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Hg19::chr2:228069493..228069504,+p@chr2:228069493..228069504
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Hg19::chr2:228069513..228069522,+p@chr2:228069513..228069522
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Hg19::chr2:230934526..230934537,-p@chr2:230934526..230934537
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Hg19::chr2:232135381..232135393,+p11@ARMC9
Hg19::chr2:232135411..232135429,+p6@ARMC9
Hg19::chr2:232135447..232135450,+p19@ARMC9
Hg19::chr2:234216005..234216009,-p@chr2:234216005..234216009
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Hg19::chr2:234216454..234216469,+p2@SAG
Hg19::chr2:234216479..234216515,+p3@SAG
Hg19::chr2:288707..288714,-p1@FAM150B
Hg19::chr2:45154282..45154288,-p@chr2:45154282..45154288
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Hg19::chr2:45163481..45163517,-p@chr2:45163481..45163517
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Hg19::chr2:67663662..67663666,+p@chr2:67663662..67663666
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Hg19::chr2:71396390..71396424,-p@chr2:71396390..71396424
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Hg19::chr2:74517441..74517450,-p10@SLC4A5
Hg19::chr2:74517459..74517491,-p1@SLC4A5
Hg19::chr2:74517662..74517669,-p13@SLC4A5
Hg19::chr2:74517672..74517682,-p11@SLC4A5
Hg19::chr2:74517994..74518001,-p12@SLC4A5
Hg19::chr2:74555328..74555345,-p5@SLC4A5
Hg19::chr2:74555350..74555368,-p7@SLC4A5
Hg19::chr2:82314894..82314943,+p@chr2:82314894..82314943
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Hg19::chr3:10706167..10706179,-p@chr3:10706167..10706179
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Hg19::chr3:10706190..10706215,-p@chr3:10706190..10706215
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Hg19::chr3:115266668..115266682,+p@chr3:115266668..115266682
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Hg19::chr3:124303512..124303532,+p6@KALRN
Hg19::chr3:124303539..124303551,+p14@KALRN
Hg19::chr3:142683017..142683022,+p1@ENST00000478823
Hg19::chr3:169629354..169629372,+p1@SAMD7
Hg19::chr3:183733628..183733631,-p@chr3:183733628..183733631
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Hg19::chr3:183733642..183733653,-p@chr3:183733642..183733653
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Hg19::chr3:183733654..183733680,-p@chr3:183733654..183733680
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Hg19::chr3:183733700..183733710,-p@chr3:183733700..183733710
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Hg19::chr3:183733712..183733722,-p@chr3:183733712..183733722
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Hg19::chr3:39827211..39827218,+p@chr3:39827211..39827218
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Hg19::chr3:39827244..39827251,+p@chr3:39827244..39827251
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Hg19::chr3:39827273..39827281,+p@chr3:39827273..39827281
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Hg19::chr3:42755652..42755664,-p5@CCDC13
Hg19::chr3:45838011..45838034,-p2@SLC6A20
Hg19::chr3:50170876..50170915,+p@chr3:50170876..50170915
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Hg19::chr3:50170974..50170988,+p@chr3:50170974..50170988
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Hg19::chr3:50230108..50230114,+p5@GNAT1
Hg19::chr3:50230129..50230138,+p3@GNAT1
Hg19::chr3:50230183..50230193,+p4@GNAT1
Hg19::chr3:58612803..58612815,-p15@FAM107A
Hg19::chr3:58612849..58612850,-p32@FAM107A
Hg19::chr3:64546630..64546632,+p20@ADAMTS9-AS1
Hg19::chr3:69986882..69986894,+p@chr3:69986882..69986894
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Hg19::chr3:99246030..99246041,-p1@ENST00000484675
Hg19::chr4:110749110..110749115,+p4@RRH
Hg19::chr4:110749119..110749137,+p1@RRH
Hg19::chr4:110749143..110749155,+p2@RRH
Hg19::chr4:110749176..110749185,+p3@RRH
Hg19::chr4:111563076..111563124,-p8@PITX2
Hg19::chr4:111563270..111563277,+p@chr4:111563270..111563277
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Hg19::chr4:114038309..114038323,+p36@ANK2
Hg19::chr4:1233005..1233017,+p@chr4:1233005..1233017
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Hg19::chr4:124866701..124866727,+p@chr4:124866701..124866727
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Hg19::chr4:139823968..139823969,-p@chr4:139823968..139823969
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Hg19::chr4:14056325..14056333,+p@chr4:14056325..14056333
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Hg19::chr4:153998200..153998212,+p@chr4:153998200..153998212
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Hg19::chr4:155665145..155665158,+p1@LRAT
Hg19::chr4:170867108..170867113,+p2@ENST00000509956
Hg19::chr4:170867127..170867132,+p3@ENST00000509956
Hg19::chr4:170946782..170946789,+p@chr4:170946782..170946789
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Hg19::chr4:170948361..170948375,-p8@MFAP3L
Hg19::chr4:186578448..186578462,-p21@SORBS2
Hg19::chr4:2889217..2889237,+p37@ADD1
Hg19::chr4:2889239..2889255,+p40@ADD1
Hg19::chr4:2889277..2889291,+p44@ADD1
Hg19::chr4:47990045..47990051,+p@chr4:47990045..47990051
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Hg19::chr4:75625952..75625967,+p@chr4:75625952..75625967
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Hg19::chr4:76823577..76823588,-p3@PPEF2
Hg19::chr4:76823597..76823623,-p1@PPEF2
Hg19::chr4:9914543..9914548,+p@chr4:9914543..9914548
+
Hg19::chr5:138298043..138298048,+p@chr5:138298043..138298048
+
Hg19::chr5:146897300..146897309,+p@chr5:146897300..146897309
+
Hg19::chr5:148656309..148656322,-p1@ENST00000512647
Hg19::chr5:148656344..148656353,-p1@ENST00000522685
Hg19::chr5:149240113..149240120,-p1@BX537592
Hg19::chr5:149250331..149250335,-p@chr5:149250331..149250335
-
Hg19::chr5:149286080..149286083,-p@chr5:149286080..149286083
-
Hg19::chr5:149324306..149324362,-p1@PDE6A
Hg19::chr5:149324367..149324384,-p2@PDE6A
Hg19::chr5:149437537..149437576,-p@chr5:149437537..149437576
-
Hg19::chr5:1520551..1520591,+p@chr5:1520551..1520591
+
Hg19::chr5:160365587..160365598,-p2@LOC285629
Hg19::chr5:160365601..160365625,-p1@LOC285629
Hg19::chr5:17186393..17186443,+p@chr5:17186393..17186443
+
Hg19::chr5:17186457..17186468,+p@chr5:17186457..17186468
+
Hg19::chr5:17186491..17186515,+p@chr5:17186491..17186515
+
Hg19::chr5:178423222..178423224,-p6@GRM6
Hg19::chr5:55902050..55902058,-p4@ENST00000438651
Hg19::chr5:55902075..55902084,-p1@ENST00000438651
Hg19::chr6:126361740..126361751,+p@chr6:126361740..126361751
+
Hg19::chr6:126671561..126671562,-p@chr6:126671561..126671562
-
Hg19::chr6:1389613..1389637,-p@chr6:1389613..1389637
-
Hg19::chr6:20265831..20265859,+p@chr6:20265831..20265859
+
Hg19::chr6:3710075..3710111,-p@chr6:3710075..3710111
-
Hg19::chr6:43970211..43970220,+p@chr6:43970211..43970220
+
Hg19::chr6:52568655..52568665,-p1@ENST00000404253
Hg19::chr6:52568690..52568697,-p2@ENST00000404253
Hg19::chr6:70991571..70991587,-p@chr6:70991571..70991587
-
Hg19::chr6:70992825..70992836,-p4@COL9A1
Hg19::chr6:70992888..70992906,-p1@COL9A1
Hg19::chr6:90024990..90024993,-p3@GABRR2
Hg19::chr7:104536462..104536472,-p@chr7:104536462..104536472
-
Hg19::chr7:104536475..104536482,-p@chr7:104536475..104536482
-
Hg19::chr7:116340155..116340162,+p43@MET
Hg19::chr7:127116878..127116915,+p1@ENST00000448311
Hg19::chr7:127544641..127544652,+p12@SND1
Hg19::chr7:127544658..127544672,+p7@SND1
Hg19::chr7:129028504..129028524,+p12@AHCYL2
Hg19::chr7:129028525..129028531,+p32@AHCYL2
Hg19::chr7:129028541..129028558,+p17@AHCYL2
Hg19::chr7:129028694..129028708,+p20@AHCYL2
Hg19::chr7:15707541..15707572,+p2@ENST00000451240
p2@uc003ste.2
Hg19::chr7:22900150..22900172,+p@chr7:22900150..22900172
+
Hg19::chr7:23719840..23719854,+p2@C7orf46
Hg19::chr7:50096029..50096038,-p4@ZPBP
Hg19::chr7:68895908..68895915,-p1@ENST00000435148
Hg19::chr7:75864279..75864290,+p5@SRRM3
Hg19::chr7:93537787..93537794,-p@chr7:93537787..93537794
-
Hg19::chr7:93550754..93550762,+p12@GNG11
Hg19::chr7:98547638..98547643,+p@chr7:98547638..98547643
+
Hg19::chr8:10105885..10105896,+p@chr8:10105885..10105896
+
Hg19::chr8:11182931..11182942,-p1@ENST00000498997
p1@uc003wto.1
Hg19::chr8:34100272..34100277,-p2@CR749549
Hg19::chr8:80908734..80908755,-p@chr8:80908734..80908755
-
Hg19::chr8:80908763..80908771,-p@chr8:80908763..80908771
-
Hg19::chr8:98788390..98788402,-p@chr8:98788390..98788402
-
Hg19::chr9:10702142..10702182,+p@chr9:10702142..10702182
+
Hg19::chr9:111764519..111764525,-p@chr9:111764519..111764525
-
Hg19::chr9:117389150..117389161,+p@chr9:117389150..117389161
+
Hg19::chr9:126520400..126520414,-p10@DENND1A
Hg19::chr9:127710300..127710324,-p5@GOLGA1
Hg19::chr9:128121461..128121462,-p@chr9:128121461..128121462
-
Hg19::chr9:138798375..138798380,+p@chr9:138798375..138798380
+
Hg19::chr9:140488282..140488312,-p@chr9:140488282..140488312
-
Hg19::chr9:140488318..140488325,-p@chr9:140488318..140488325
-
Hg19::chr9:32832413..32832414,-p@chr9:32832413..32832414
-
Hg19::chr9:32832456..32832467,-p@chr9:32832456..32832467
-
Hg19::chr9:71760355..71760369,+p@chr9:71760355..71760369
+
Hg19::chr9:73479427..73479440,-p12@TRPM3
Hg19::chr9:73480392..73480400,-p11@TRPM3
Hg19::chr9:73480439..73480450,-p13@TRPM3
Hg19::chr9:73480452..73480461,-p16@TRPM3
Hg19::chr9:73480470..73480475,-p23@TRPM3
Hg19::chr9:73480480..73480485,-p19@TRPM3
Hg19::chr9:73483926..73483937,-p4@TRPM3
Hg19::chr9:73483958..73483985,-p1@TRPM3
Hg19::chr9:95815644..95815647,-p@chr9:95815644..95815647
-
Hg19::chr9:95815653..95815660,-p@chr9:95815653..95815660
-
Hg19::chr9:95815666..95815669,-p@chr9:95815666..95815669
-
Hg19::chr9:95815690..95815701,-p@chr9:95815690..95815701
-
Hg19::chrX:10126304..10126343,+p8@CLCN4
Hg19::chrX:108725272..108725278,-p2@GUCY2F
Hg19::chrX:108725306..108725319,-p1@GUCY2F
Hg19::chrX:41306575..41306614,+p1@NYX
Hg19::chrX:73061334..73061335,-p@chrX:73061334..73061335
-
Hg19::chrX:73061339..73061355,-p@chrX:73061339..73061355
-
Hg19::chrY:23618100..23618104,-p@chrY:23618100..23618104
-


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

No results for this coexpression

Enriched Gene Ontology terms on this co-expression cluster<b>Summary:</b> Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br>data

GO IDGO nameFDR corrected p-value
GO:0007601visual perception9.81064457375546e-31
GO:0050953sensory perception of light stimulus9.81064457375546e-31
GO:0032501multicellular organismal process3.08510962248049e-22
GO:0007600sensory perception3.26189058192588e-17
GO:0003008system process1.26111358163529e-16
GO:0050877neurological system process1.26111358163529e-16
GO:0044459plasma membrane part1.78753219018382e-10
GO:0005887integral to plasma membrane3.48236554855786e-09
GO:0031226intrinsic to plasma membrane3.82694137065199e-09
GO:0005886plasma membrane1.10604557177807e-08
GO:0009584detection of visible light1.14514516990045e-08
GO:0009583detection of light stimulus1.21800691734385e-08
GO:0016020membrane1.21800691734385e-08
GO:0051606detection of stimulus5.28086257607399e-08
GO:0009416response to light stimulus5.38462326854317e-08
GO:0009582detection of abiotic stimulus5.65792470998684e-08
GO:0050906detection of stimulus during sensory perception6.11213327574056e-08
GO:0009581detection of external stimulus9.71823187771387e-08
GO:0016021integral to membrane1.18976350754503e-07
GO:0031224intrinsic to membrane1.37309308415663e-07
GO:0009314response to radiation1.83030242100536e-07
GO:0051179localization2.5065367989969e-07
GO:0044425membrane part2.61038036091781e-07
GO:0022857transmembrane transporter activity2.74197624924218e-07
GO:0007602phototransduction2.87293679057931e-07
GO:0050962detection of light stimulus during sensory perception3.74486102475781e-07
GO:0050908detection of light stimulus during visual perception3.74486102475781e-07
GO:0006811ion transport5.92245011953541e-07
GO:0022892substrate-specific transporter activity7.77852834846723e-07
GO:0006810transport1.75099921659154e-06
GO:0015075ion transmembrane transporter activity2.18226246992338e-06
GO:0022891substrate-specific transmembrane transporter activity2.48960658892293e-06
GO:0051234establishment of localization3.37262948252363e-06
GO:0009628response to abiotic stimulus3.37262948252363e-06
GO:0031404chloride ion binding7.22496996755269e-06
GO:0043168anion binding7.22496996755269e-06
GO:0000267cell fraction3.39085306567683e-05
GO:0044464cell part7.74935097155196e-05
GO:0006776vitamin A metabolic process0.000113042067013674
GO:0006775fat-soluble vitamin metabolic process0.000196630872701977
GO:0008509anion transmembrane transporter activity0.000213168768062022
GO:0006820anion transport0.000236212476668935
GO:0043195terminal button0.000571118476344432
GO:0033267axon part0.000571118476344432
GO:0005216ion channel activity0.000640543268030827
GO:0005624membrane fraction0.000640982667833571
GO:0022838substrate specific channel activity0.000671170630792134
GO:0022803passive transmembrane transporter activity0.000697600840236669
GO:0015267channel activity0.000697600840236669
GO:0005254chloride channel activity0.000697600840236669
GO:0016323basolateral plasma membrane0.000787400292004814
GO:0007275multicellular organismal development0.00114432280767387
GO:0019867outer membrane0.00121832200935113
GO:0005253anion channel activity0.00140117869902976
GO:0042461photoreceptor cell development0.00211882511925589
GO:0015291secondary active transmembrane transporter activity0.00314933029047855
GO:0046530photoreceptor cell differentiation0.00327547442681604
GO:0048856anatomical structure development0.00372423861523655
GO:0015293symporter activity0.00379722704385757
GO:0005640nuclear outer membrane0.00379722704385757
GO:0030594neurotransmitter receptor activity0.0046305457777339
GO:0048513organ development0.00494388874763118
GO:0042165neurotransmitter binding0.00498385539098099
GO:0048731system development0.00522720437998141
GO:0032502developmental process0.00527176699239718
GO:0045211postsynaptic membrane0.00527176699239718
GO:0044456synapse part0.00694711151701581
GO:0045178basal part of cell0.00704584335409783
GO:0015711organic anion transport0.00704584335409783
GO:0009925basal plasma membrane0.00704584335409783
GO:0005509calcium ion binding0.00769302195183634
GO:0015629actin cytoskeleton0.00776742014550554
GO:0007166cell surface receptor linked signal transduction0.0107349223375345
GO:0015464acetylcholine receptor activity0.0113398407270675
GO:0018298protein-chromophore linkage0.0113398407270675
GO:0022804active transmembrane transporter activity0.0113398407270675
GO:0006766vitamin metabolic process0.0113830076079591
GO:0042166acetylcholine binding0.0120582613735087
GO:0031968organelle outer membrane0.013898647321435
GO:0009887organ morphogenesis0.0170094158627189
GO:0009953dorsal/ventral pattern formation0.0187450992181296
GO:0001709cell fate determination0.0187450992181296
GO:0021902commitment of a neuronal cell to a specific type of neuron in the forebrain0.0187450992181296
GO:0051450myoblast proliferation0.0187450992181296
GO:0015129lactate transmembrane transporter activity0.0187450992181296
GO:0021877forebrain neuron fate commitment0.0187450992181296
GO:0047173phosphatidylcholine-retinol O-acyltransferase activity0.0187450992181296
GO:0015727lactate transport0.0187450992181296
GO:0005008hepatocyte growth factor receptor activity0.0187450992181296
GO:0009288flagellin-based flagellum0.0187450992181296
GO:0033130acetylcholine receptor binding0.0187450992181296
GO:0048012hepatocyte growth factor receptor signaling pathway0.0187450992181296
GO:0006649phospholipid transfer to membrane0.0187450992181296
GO:0009642response to light intensity0.0187450992181296
GO:0005548phospholipid transporter activity0.0209281533410604
GO:0005507copper ion binding0.0219957603073038
GO:0019861flagellum0.0228745297614298
GO:0030424axon0.0228745297614298
GO:0007389pattern specification process0.0250956803577066
GO:0001764neuron migration0.0250956803577066
GO:0000904cellular morphogenesis during differentiation0.025757485968105
GO:0015698inorganic anion transport0.0263006760497974
GO:0005230extracellular ligand-gated ion channel activity0.0279803275485031
GO:0006939smooth muscle contraction0.0279803275485031
GO:0004890GABA-A receptor activity0.0279803275485031
GO:0009605response to external stimulus0.02979352862017
GO:0007420brain development0.0306076284339457
GO:0021872generation of neurons in the forebrain0.0306076284339457
GO:0021798forebrain dorsal/ventral pattern formation0.0306076284339457
GO:0007468regulation of rhodopsin gene expression0.0306076284339457
GO:0022612gland morphogenesis0.0306076284339457
GO:000550211-cis retinal binding0.0306076284339457
GO:0021879forebrain neuron differentiation0.0306076284339457
GO:0008525phosphatidylcholine transmembrane transporter activity0.0306076284339457
GO:0007435salivary gland morphogenesis0.0306076284339457
GO:0043176amine binding0.0319321797904677
GO:0008324cation transmembrane transporter activity0.0319321797904677
GO:0044463cell projection part0.0355698893762162
GO:0016917GABA receptor activity0.0355698893762162
GO:0005328neurotransmitter:sodium symporter activity0.0397857995950336
GO:0004167dopachrome isomerase activity0.041246130335252
GO:0008273calcium, potassium:sodium antiporter activity0.041246130335252
GO:0005594collagen type IX0.041246130335252
GO:0017147Wnt-protein binding0.041246130335252
GO:0043288apocarotenoid metabolic process0.041246130335252
GO:0042574retinal metabolic process0.041246130335252
GO:0046873metal ion transmembrane transporter activity0.041246130335252
GO:0005326neurotransmitter transporter activity0.041246130335252
GO:0019748secondary metabolic process0.041246130335252
GO:0022834ligand-gated channel activity0.041246130335252
GO:0015276ligand-gated ion channel activity0.041246130335252
GO:0022836gated channel activity0.042059685265673



Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br>disease_data<br>

Cell Type
Ontology termp-valuen

Uber Anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen


Overrepresented TFBS (DNA) motifs on this co-expression cluster<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs



JASPAR motifs

Motifs-log10(p-value)

{{{tfbs_overrepresentation_jaspar}}}



ENCODE TF ChIP-seq peak enrichment analysis<b>Summary:</b> For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br><br>data

No analysis results for this cluster

Relative expression of the co-expression cluster<b>Summary:</b>Co-expression clusters are compared against FANTOM5 samples to obtain relative expression. <br><b>Analyst:</b>NA<br><br>link to data source<br> data

"{{{coexpression_dpi_cluster_scores_median}}}" is not a number.

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