Personal tools

DOID:0060121: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
Line 14: Line 14:
|obo_creation_date=2011-07-27T01:49:44Z
|obo_creation_date=2011-07-27T01:49:44Z
|subset=
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=

Latest revision as of 16:31, 26 June 2012

Name:integumentary system benign neoplasm
Namespace:disease_ontology
Created by:lschriml
Creation date:2011-07-27T01:49:44Z

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:DOID:0060085(organ system benign neoplasm)



Children


is a:DOID:3165 (skin benign neoplasm)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

  • 10711-109H9 (fibrous histiocytoma cell line:GCT TIB-223)

Mouse (Mus musculus)

  • 10711-109H9 (fibrous histiocytoma cell line:GCT TIB-223)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:0060121 (integumentary system benign neoplasm), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
5.42e-195FFCP PHASE2:Hg19::chr16:77317713..77317723,+#_4e5c0bc7481780a5bf236b4a15b51d86p1@CU687665
5.42e-195FFCP PHASE2:Hg19::chr11:101742272..101742276,-#_4e5c0bc7481780a5bf236b4a15b51d86p@chr11:101742272..101742276, -
5.42e-195FFCP PHASE1:Hg19::chr16:77317713..77317723,+#_4e5c0bc7481780a5bf236b4a15b51d86p1@CU687665
5.42e-195FFCP PHASE1:Hg19::chr11:101742272..101742276,-#_4e5c0bc7481780a5bf236b4a15b51d86p@chr11:101742272..101742276, -
9.37e-99FFCP PHASE1:Hg19::chr5:14034644..14034647,-#_32182803aee8393d865fb8c6be2dcc73p@chr5:14034644..14034647, -
9.37e-99FFCP PHASE1:Hg19::chr11:81551043..81551054,-#_32182803aee8393d865fb8c6be2dcc73p@chr11:81551043..81551054, -
9.37e-99FFCP PHASE2:Hg19::chr5:14034644..14034647,-#_32182803aee8393d865fb8c6be2dcc73p@chr5:14034644..14034647, -
9.37e-99FFCP PHASE2:Hg19::chr16:51670868..51670880,-#_32182803aee8393d865fb8c6be2dcc73p@chr16:51670868..51670880, -
9.37e-99FFCP PHASE1:Hg19::chr18:71197490..71197495,-#_32182803aee8393d865fb8c6be2dcc73p@chr18:71197490..71197495, -
9.37e-99FFCP PHASE1:Hg19::chr16:51670868..51670880,-#_32182803aee8393d865fb8c6be2dcc73p@chr16:51670868..51670880, -
9.37e-99FFCP PHASE2:Hg19::chr18:71197490..71197495,-#_32182803aee8393d865fb8c6be2dcc73p@chr18:71197490..71197495, -
9.37e-99FFCP PHASE2:Hg19::chr11:81551043..81551054,-#_32182803aee8393d865fb8c6be2dcc73p@chr11:81551043..81551054, -
2.55e-98FFCP PHASE2:Hg19::chr3:45174403..45174415,+#_27a6eb6fadba0fb88a81632db395f9fcp@chr3:45174403..45174415, +
2.55e-98FFCP PHASE1:Hg19::chr4:34480309..34480321,-#_27a6eb6fadba0fb88a81632db395f9fcp@chr4:34480309..34480321, -
2.55e-98FFCP PHASE1:Hg19::chr5:23952305..23952310,+#_27a6eb6fadba0fb88a81632db395f9fcp@chr5:23952305..23952310, +
2.55e-98FFCP PHASE1:Hg19::chr3:106393655..106393659,+#_27a6eb6fadba0fb88a81632db395f9fcp@chr3:106393655..106393659, +
2.55e-98FFCP PHASE2:Hg19::chr4:34480309..34480321,-#_27a6eb6fadba0fb88a81632db395f9fcp@chr4:34480309..34480321, -
2.55e-98FFCP PHASE2:Hg19::chr5:23952305..23952310,+#_27a6eb6fadba0fb88a81632db395f9fcp@chr5:23952305..23952310, +
2.55e-98FFCP PHASE2:Hg19::chr3:106393655..106393659,+#_27a6eb6fadba0fb88a81632db395f9fcp@chr3:106393655..106393659, +
2.55e-98FFCP PHASE1:Hg19::chr3:45174403..45174415,+#_27a6eb6fadba0fb88a81632db395f9fcp@chr3:45174403..45174415, +
1.23e-66FFCP PHASE1:Hg19::chr7:119353807..119353812,-#_98fcc56d6ea0c6fe3b6be209ddc7992ap@chr7:119353807..119353812, -
1.23e-66FFCP PHASE1:Hg19::chr4:177796841..177796851,+#_98fcc56d6ea0c6fe3b6be209ddc7992ap1@ENST00000508790
1.23e-66FFCP PHASE2:Hg19::chr4:177796841..177796851,+#_98fcc56d6ea0c6fe3b6be209ddc7992ap1@ENST00000508790
1.23e-66FFCP PHASE2:Hg19::chr7:119353807..119353812,-#_98fcc56d6ea0c6fe3b6be209ddc7992ap@chr7:119353807..119353812, -
2.39e-66FFCP PHASE1:Hg19::chrX:132231123..132231140,-#_5a019ccc571c18d4c5dde0d3ef9c86acp1@USP26
2.39e-66FFCP PHASE2:Hg19::chrX:132231123..132231140,-#_5a019ccc571c18d4c5dde0d3ef9c86acp1@USP26
2.39e-66FFCP PHASE1:Hg19::chr8:15939682..15939688,+#_5a019ccc571c18d4c5dde0d3ef9c86acp@chr8:15939682..15939688, +
2.39e-66FFCP PHASE2:Hg19::chr10:37004821..37004852,-#_5a019ccc571c18d4c5dde0d3ef9c86acp@chr10:37004821..37004852, -
2.39e-66FFCP PHASE2:Hg19::chr8:15939682..15939688,+#_5a019ccc571c18d4c5dde0d3ef9c86acp@chr8:15939682..15939688, +
2.39e-66FFCP PHASE1:Hg19::chr10:37004821..37004852,-#_5a019ccc571c18d4c5dde0d3ef9c86acp@chr10:37004821..37004852, -
4.66e-66FFCP PHASE2:Hg19::chr11:84019133..84019135,-#_adc929b33582b2abaf7a3e46f4591fbep@chr11:84019133..84019135, -
4.66e-66FFCP PHASE1:Hg19::chr11:84019133..84019135,-#_adc929b33582b2abaf7a3e46f4591fbep@chr11:84019133..84019135, -
1.46e-50FFCP PHASE1:Hg19::chr11:81549961..81549965,-#_f62c1cc39a285fdb05529aac5a204a7dp@chr11:81549961..81549965, -
1.46e-50FFCP PHASE1:Hg19::chr5:27723923..27723927,-#_f62c1cc39a285fdb05529aac5a204a7dp@chr5:27723923..27723927, -
1.46e-50FFCP PHASE2:Hg19::chr11:81549961..81549965,-#_f62c1cc39a285fdb05529aac5a204a7dp@chr11:81549961..81549965, -
1.46e-50FFCP PHASE2:Hg19::chr5:27723923..27723927,-#_f62c1cc39a285fdb05529aac5a204a7dp@chr5:27723923..27723927, -
2.42e-50FFCP PHASE1:Hg19::chr4:189864018..189864037,+#_dc4be087cfc198dff28680cbef52e560p@chr4:189864018..189864037, +
2.42e-50FFCP PHASE1:Hg19::chrX:124347061..124347063,-#_dc4be087cfc198dff28680cbef52e560p@chrX:124347061..124347063, -
2.42e-50FFCP PHASE2:Hg19::chr4:189864018..189864037,+#_dc4be087cfc198dff28680cbef52e560p@chr4:189864018..189864037, +
2.42e-50FFCP PHASE1:Hg19::chrX:132352373..132352384,-#_dc4be087cfc198dff28680cbef52e560p1@TFDP3
2.42e-50FFCP PHASE2:Hg19::chrX:124347061..124347063,-#_dc4be087cfc198dff28680cbef52e560p@chrX:124347061..124347063, -
2.42e-50FFCP PHASE2:Hg19::chrX:132352373..132352384,-#_dc4be087cfc198dff28680cbef52e560p1@TFDP3
6.58e-50FFCP PHASE2:Hg19::chr7:12997533..12997536,+#_88f69cc4f892dd7dc20f5398029e2917p@chr7:12997533..12997536, +
6.58e-50FFCP PHASE1:Hg19::chr7:12997533..12997536,+#_88f69cc4f892dd7dc20f5398029e2917p@chr7:12997533..12997536, +
6.62e-41FFCP PHASE2:Hg19::chr12:127737083..127737103,-#_a81de191c514dd2d459d11b32fe09914p@chr12:127737083..127737103, -
6.62e-41FFCP PHASE2:Hg19::chr5:27742047..27742052,-#_a81de191c514dd2d459d11b32fe09914p@chr5:27742047..27742052, -
6.62e-41FFCP PHASE1:Hg19::chr12:127737083..127737103,-#_a81de191c514dd2d459d11b32fe09914p@chr12:127737083..127737103, -
6.62e-41FFCP PHASE1:Hg19::chr8:119905427..119905438,-#_a81de191c514dd2d459d11b32fe09914p@chr8:119905427..119905438, -
6.62e-41FFCP PHASE2:Hg19::chr8:119905427..119905438,-#_a81de191c514dd2d459d11b32fe09914p@chr8:119905427..119905438, -
6.62e-41FFCP PHASE1:Hg19::chr5:27742047..27742052,-#_a81de191c514dd2d459d11b32fe09914p@chr5:27742047..27742052, -
9.91e-41FFCP PHASE1:Hg19::chr19:9811101..9811112,-#_c7c69fead1ff562b92362df95b2b73f5p3@ZNF812
9.91e-41FFCP PHASE2:Hg19::chr13:87732242..87732246,-#_c7c69fead1ff562b92362df95b2b73f5p@chr13:87732242..87732246, -
9.91e-41FFCP PHASE2:Hg19::chr19:9811101..9811112,-#_c7c69fead1ff562b92362df95b2b73f5p3@ZNF812
9.91e-41FFCP PHASE1:Hg19::chr9:118595109..118595124,+#_c7c69fead1ff562b92362df95b2b73f5p@chr9:118595109..118595124, +
9.91e-41FFCP PHASE1:Hg19::chr13:87732242..87732246,-#_c7c69fead1ff562b92362df95b2b73f5p@chr13:87732242..87732246, -
9.91e-41FFCP PHASE2:Hg19::chr9:118595109..118595124,+#_c7c69fead1ff562b92362df95b2b73f5p@chr9:118595109..118595124, +
1.48e-40FFCP PHASE2:Hg19::chrX:140336680..140336697,-#_faeb336c7c8a1a4e449e7b629ca6c548p2@SPANXC
1.48e-40FFCP PHASE1:Hg19::chrX:140336680..140336697,-#_faeb336c7c8a1a4e449e7b629ca6c548p2@SPANXC
3.3e-40FFCP PHASE1:Hg19::chr3:60761167..60761179,+#_6db61e75f076e83b0cfd4542efa11d3bp@chr3:60761167..60761179, +
3.3e-40FFCP PHASE2:Hg19::chr8:76774227..76774234,+#_6db61e75f076e83b0cfd4542efa11d3bp@chr8:76774227..76774234, +
3.3e-40FFCP PHASE1:Hg19::chr18:63273310..63273317,+#_6db61e75f076e83b0cfd4542efa11d3bp@chr18:63273310..63273317, +
3.3e-40FFCP PHASE2:Hg19::chr3:60761167..60761179,+#_6db61e75f076e83b0cfd4542efa11d3bp@chr3:60761167..60761179, +
3.3e-40FFCP PHASE2:Hg19::chr18:63273310..63273317,+#_6db61e75f076e83b0cfd4542efa11d3bp@chr18:63273310..63273317, +
3.3e-40FFCP PHASE2:Hg19::chr11:28792916..28792929,+#_6db61e75f076e83b0cfd4542efa11d3bp@chr11:28792916..28792929, +
3.3e-40FFCP PHASE1:Hg19::chr8:76774227..76774234,+#_6db61e75f076e83b0cfd4542efa11d3bp@chr8:76774227..76774234, +
3.3e-40FFCP PHASE1:Hg19::chr11:28792916..28792929,+#_6db61e75f076e83b0cfd4542efa11d3bp@chr11:28792916..28792929, +
1.84e-34FFCP PHASE1:Hg19::chr3:94657049..94657061,+#_30cd98073f96a0dd45030ffec20b09dfp1@ENST00000462219
1.84e-34FFCP PHASE2:Hg19::chr13:87778457..87778464,+#_30cd98073f96a0dd45030ffec20b09dfp@chr13:87778457..87778464, +
1.84e-34FFCP PHASE2:Hg19::chr3:94657049..94657061,+#_30cd98073f96a0dd45030ffec20b09dfp1@ENST00000462219
1.84e-34FFCP PHASE1:Hg19::chr13:87778457..87778464,+#_30cd98073f96a0dd45030ffec20b09dfp@chr13:87778457..87778464, +
3.61e-34FFCP PHASE2:Hg19::chr3:79552183..79552188,+#_c30a78210bd971d576d9af93fa702225p@chr3:79552183..79552188, +
3.61e-34FFCP PHASE2:Hg19::chr8:88823985..88824001,-#_c30a78210bd971d576d9af93fa702225p@chr8:88823985..88824001, -
3.61e-34FFCP PHASE1:Hg19::chrX:148793752..148793763,+#_c30a78210bd971d576d9af93fa702225p3@MAGEA11
3.61e-34FFCP PHASE2:Hg19::chrX:148793752..148793763,+#_c30a78210bd971d576d9af93fa702225p3@MAGEA11
3.61e-34FFCP PHASE1:Hg19::chr3:79552183..79552188,+#_c30a78210bd971d576d9af93fa702225p@chr3:79552183..79552188, +
3.61e-34FFCP PHASE1:Hg19::chr8:88823985..88824001,-#_c30a78210bd971d576d9af93fa702225p@chr8:88823985..88824001, -
5.05e-34FFCP PHASE1:Hg19::chr7:22136603..22136614,+#_9aa8fa84f510550329c445940215a9dcp@chr7:22136603..22136614, +
5.05e-34FFCP PHASE2:Hg19::chr7:22136603..22136614,+#_9aa8fa84f510550329c445940215a9dcp@chr7:22136603..22136614, +
5.05e-34FFCP PHASE1:Hg19::chr6:66708902..66708907,-#_9aa8fa84f510550329c445940215a9dcp@chr6:66708902..66708907, -
5.05e-34FFCP PHASE2:Hg19::chr6:66708902..66708907,-#_9aa8fa84f510550329c445940215a9dcp@chr6:66708902..66708907, -
7.06e-34FFCP PHASE2:Hg19::chr19:54545833..54545844,-#_dd93aa4f94262f1151d1d3a0ffcc810ep@chr19:54545833..54545844, -
7.06e-34FFCP PHASE1:Hg19::chr17:53535935..53535939,+#_dd93aa4f94262f1151d1d3a0ffcc810ep@chr17:53535935..53535939, +
7.06e-34FFCP PHASE1:Hg19::chr19:54545833..54545844,-#_dd93aa4f94262f1151d1d3a0ffcc810ep@chr19:54545833..54545844, -
7.06e-34FFCP PHASE2:Hg19::chr17:53535935..53535939,+#_dd93aa4f94262f1151d1d3a0ffcc810ep@chr17:53535935..53535939, +
9.85e-34FFCP PHASE2:Hg19::chr10:2357481..2357493,+#_2a42995cb3d2734211d71939a5989e54p@chr10:2357481..2357493, +
9.85e-34FFCP PHASE1:Hg19::chr10:2357481..2357493,+#_2a42995cb3d2734211d71939a5989e54p@chr10:2357481..2357493, +
9.99e-30FFCP PHASE2:Hg19::chr20:26116623..26116634,+#_cc54d32b4b0f5bfcadb2859bd9971c00p@chr20:26116623..26116634, +
9.99e-30FFCP PHASE1:Hg19::chr21:17726230..17726234,+#_cc54d32b4b0f5bfcadb2859bd9971c00p@chr21:17726230..17726234, +
9.99e-30FFCP PHASE1:Hg19::chrX:141290299..141290303,-#_cc54d32b4b0f5bfcadb2859bd9971c00p@chrX:141290299..141290303, -
9.99e-30FFCP PHASE2:Hg19::chr13:87781278..87781282,+#_cc54d32b4b0f5bfcadb2859bd9971c00p@chr13:87781278..87781282, +
9.99e-30FFCP PHASE2:Hg19::chr21:17726230..17726234,+#_cc54d32b4b0f5bfcadb2859bd9971c00p@chr21:17726230..17726234, +
9.99e-30FFCP PHASE1:Hg19::chr3:55313580..55313599,-#_cc54d32b4b0f5bfcadb2859bd9971c00p@chr3:55313580..55313599, -
9.99e-30FFCP PHASE2:Hg19::chrX:141290299..141290303,-#_cc54d32b4b0f5bfcadb2859bd9971c00p@chrX:141290299..141290303, -
9.99e-30FFCP PHASE1:Hg19::chr20:26116623..26116634,+#_cc54d32b4b0f5bfcadb2859bd9971c00p@chr20:26116623..26116634, +
9.99e-30FFCP PHASE1:Hg19::chr13:87781278..87781282,+#_cc54d32b4b0f5bfcadb2859bd9971c00p@chr13:87781278..87781282, +
9.99e-30FFCP PHASE2:Hg19::chr3:55313580..55313599,-#_cc54d32b4b0f5bfcadb2859bd9971c00p@chr3:55313580..55313599, -
1.33e-29FFCP PHASE2:Hg19::chr6:150217260..150217271,-#_0f2229cc684cd064996d56bfd3f16e49p6@RAET1E
1.33e-29FFCP PHASE1:Hg19::chr1:4729528..4729537,-#_0f2229cc684cd064996d56bfd3f16e49p@chr1:4729528..4729537, -
1.33e-29FFCP PHASE2:Hg19::chr1:4729528..4729537,-#_0f2229cc684cd064996d56bfd3f16e49p@chr1:4729528..4729537, -
1.33e-29FFCP PHASE1:Hg19::chr6:150217260..150217271,-#_0f2229cc684cd064996d56bfd3f16e49p6@RAET1E