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|namespace=
|namespace=
|def="Situated along the perimeter of the adrenal gland, the adrenal cortex mediates the stress response through the production of mineralocorticoids and glucocorticoids, including aldosterone and cortisol respectively. It is also a secondary site of androgen synthesis. [WP,unvetted]." [Wikipedia:Adrenal_cortex]
|def="Situated along the perimeter of the adrenal gland, the adrenal cortex mediates the stress response through the production of mineralocorticoids and glucocorticoids, including aldosterone and cortisol respectively. It is also a secondary site of androgen synthesis. [WP,unvetted]." [Wikipedia:Adrenal_cortex]
|xref=AAO:0011009;;BTO:0000045;;EFO:0000237;;EMAPA:18427;;EV:0100136;;FMA:15632;;GAID:447;;http://upload.wikimedia.org/wikipedia/commons/thumb/5/5c/Gray1185.png/200px-Gray1185.png;;MA:0000118;;MAT:0000494;;MESH:A.06.407.071.140;;ncithesaurus:Adrenal_Cortex;;SCTID:362584002;;VHOG:0001481;;XAO:0000165
|xref=AAO:0011009;;BTO:0000045;;EFO:0000237;;EMAPA:18427;;EV:0100136;;FMA:15632;;GAID:447;;http://upload.wikimedia.org/wikipedia/commons/5/5c/Gray1185.png;;http://upload.wikimedia.org/wikipedia/commons/thumb/5/5c/Gray1185.png/200px-Gray1185.png;;MA:0000118;;MAT:0000494;;MESH:A.06.407.071.140;;ncithesaurus:Adrenal_Cortex;;SCTID:362584002;;VHOG:0001481;;XAO:0000165
|is_a=UBERON:0001851;;UBERON:0004120;;UBERON:0004121
|is_a=UBERON:0001851;;UBERON:0004120
|synonym="adrenal gland cortex" EXACT [];;"cortex (glandula suprarenalis)" EXACT [];;"cortex glandulae suprarenalis" RELATED [BTO:0000045];;"cortex of adrenal gland" EXACT [];;"cortex of suprarenal gland" EXACT [];;"suprarenal" RELATED [];;"suprarenal cortex" EXACT []
|synonym="adrenal gland cortex" EXACT [];;"cortex (glandula suprarenalis)" EXACT [];;"cortex glandulae suprarenalis" RELATED LATIN [Wikipedia:Adrenal_cortex];;"cortex glandulae suprarenalis" RELATED [BTO:0000045];;"cortex of adrenal gland" EXACT [];;"cortex of suprarenal gland" EXACT [];;"suprarenal" RELATED [];;"suprarenal cortex" EXACT []
|comment=Taxon notes: Kardong states that mammals are the first to have distinct cortext and medulla, but this contradicts XAO
|comment=Taxon notes: Kardong states that mammals are the first to have distinct cortext and medulla, but this contradicts XAO
|alt_id=UBERON:FMA_15632-MA_0000118-XAO_0000165
|alt_id=UBERON:FMA_15632-MA_0000118-XAO_0000165
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|obo_creation_date=
|obo_creation_date=
|subset=uberon_slim
|subset=uberon_slim
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=UBERON:0000926
|develops_from=
|has_quality=
|has_quality=
|located_in=
|located_in=
|part_of=UBERON:0002369
|part_of=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.obo.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|is_obsolete=
|preceded_by=
|preceded_by=
}}
}}

Revision as of 16:58, 26 June 2012

Name:adrenal cortex
Definition:"Situated along the perimeter of the adrenal gland, the adrenal cortex mediates the stress response through the production of mineralocorticoids and glucocorticoids, including aldosterone and cortisol respectively. It is also a secondary site of androgen synthesis. [WP,unvetted]." [Wikipedia:Adrenal_cortex]
Xrefs:
links:

AAO:0011009
BTO:0000045
EFO:0000237
EMAPA:18427
EV:0100136
FMA:15632
GAID:447
[ Gray1185.png Gray1185.png]
[ 200px-Gray1185.png 200px-Gray1185.png]
MA:0000118
MAT:0000494
MESH:A.06.407.071.140
ncithesaurus:Adrenal_Cortex
SCTID:362584002
VHOG:0001481

XAO:0000165
Synonyms: "adrenal gland cortex" EXACT []
"cortex (glandula suprarenalis)" EXACT []
"cortex glandulae suprarenalis" RELATED LATIN [Wikipedia:Adrenal_cortex]
"cortex glandulae suprarenalis" RELATED [BTO:0000045]
"cortex of adrenal gland" EXACT []
"cortex of suprarenal gland" EXACT []
"suprarenal" RELATED []
"suprarenal cortex" EXACT []
Comments:Taxon notes: Kardong states that mammals are the first to have distinct cortext and medulla, but this contradicts XAO
Alt_id: UBERON:FMA_15632-MA_0000118-XAO_0000165
Subset: uberon_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0001851(cortex),UBERON:0004120(mesoderm-derived structure)



Children

is a:FF:10810-111A9 (adrenal cortex adenocarcinoma cell line:SW-13)
part of:CL:0002097 (cortical cell of adrenal gland)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001235 (adrenal cortex), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data