CL:0002565: Difference between revisions
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|obo_creation_date=2011-03-01T05:28:52Z | |obo_creation_date=2011-03-01T05:28:52Z | ||
|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Revision as of 17:27, 26 June 2012
| Name: | iris pigment epithelial cell |
|---|---|
| Namespace: | cell |
| Definition: | "A pigment cell located in the epithelium of the iris." [GOC:tfm] |
| Created by: | tmeehan |
| Creation date: | 2011-03-01T05:28:52Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000066(epithelial cell),CL:0000342(pigment cell (sensu Vertebrata)) |
|---|
Children
| derives from: | FF:0000081 (human iris pigment epithelial cell sample) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11530-119I9 (Iris Pigment Epithelial Cells, donor1)
- 11610-120I8
- 11691-122I8
Mouse (Mus musculus)
- 11530-119I9 (Iris Pigment Epithelial Cells, donor1)
- 11610-120I8
- 11691-122I8
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002565 (iris pigment epithelial cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 9.37e-99 | FFCP PHASE2:Hg19::chr15:71583868..71583874,-#_5c9bf62f997b4cbf4cb008915733bf87 | p@chr15:71583868..71583874, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr15:71583868..71583874,-#_5c9bf62f997b4cbf4cb008915733bf87 | p@chr15:71583868..71583874, - |
| 1.23e-66 | FFCP PHASE1:Hg19::chr5:78112479..78112482,+#_48b51241422de1684abf5ee25ea107b5 | p@chr5:78112479..78112482, + |
| 1.23e-66 | FFCP PHASE2:Hg19::chr5:78112479..78112482,+#_48b51241422de1684abf5ee25ea107b5 | p@chr5:78112479..78112482, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr15:74495062..74495063,-#_36b36e8904b264341482a6a78be3941b | p13@STRA6 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr15:74495062..74495063,-#_36b36e8904b264341482a6a78be3941b | p13@STRA6 |
| 4.66e-66 | FFCP PHASE1:Hg19::chr22:50667406..50667412,+#_e7ebcfc96faed5fed7f6b54afdbf51e8 | p@chr22:50667406..50667412, + |
| 4.66e-66 | FFCP PHASE2:Hg19::chr22:50667406..50667412,+#_e7ebcfc96faed5fed7f6b54afdbf51e8 | p@chr22:50667406..50667412, + |
| 1.46e-50 | FFCP PHASE2:Hg19::chr8:53853688..53853698,-#_7645043fe34917f38236fef1d3aee74c | p3@BC033145 |
| 1.46e-50 | FFCP PHASE1:Hg19::chr8:53853688..53853698,-#_7645043fe34917f38236fef1d3aee74c | p3@BC033145 |
| 2.42e-50 | FFCP PHASE2:Hg19::chr7:115723897..115723915,-#_67548a5580448eea05bee490b62b574d | p@chr7:115723897..115723915, - |
| 2.42e-50 | FFCP PHASE1:Hg19::chr7:115723897..115723915,-#_67548a5580448eea05bee490b62b574d | p@chr7:115723897..115723915, - |
| 6.58e-50 | FFCP PHASE2:Hg19::chr14:100847969..100847980,+#_00c03527d925c8d615f4dee1d3310b99 | p6@WDR25 |
| 6.58e-50 | FFCP PHASE1:Hg19::chr14:100847969..100847980,+#_00c03527d925c8d615f4dee1d3310b99 | p6@WDR25 |
| 6.62e-41 | FFCP PHASE2:Hg19::chr7:131803806..131803815,+#_37f6557b4bdfb09c609c8ce2673ef78f | p@chr7:131803806..131803815, + |
| 6.62e-41 | FFCP PHASE1:Hg19::chr2:35680607..35680613,-#_37f6557b4bdfb09c609c8ce2673ef78f | p@chr2:35680607..35680613, - |
| 6.62e-41 | FFCP PHASE1:Hg19::chr7:131803806..131803815,+#_37f6557b4bdfb09c609c8ce2673ef78f | p@chr7:131803806..131803815, + |
| 6.62e-41 | FFCP PHASE2:Hg19::chr2:35680607..35680613,-#_37f6557b4bdfb09c609c8ce2673ef78f | p@chr2:35680607..35680613, - |
| 9.91e-41 | FFCP PHASE1:Hg19::chr7:115723925..115723935,-#_b0494a298404930d7dfabb21d01d1986 | p@chr7:115723925..115723935, - |
| 9.91e-41 | FFCP PHASE1:Hg19::chrX:106198807..106198826,-#_b0494a298404930d7dfabb21d01d1986 | p@chrX:106198807..106198826, - |
| 9.91e-41 | FFCP PHASE2:Hg19::chr7:115723925..115723935,-#_b0494a298404930d7dfabb21d01d1986 | p@chr7:115723925..115723935, - |
| 9.91e-41 | FFCP PHASE2:Hg19::chrX:106198807..106198826,-#_b0494a298404930d7dfabb21d01d1986 | p@chrX:106198807..106198826, - |
| 1.48e-40 | FFCP PHASE2:Hg19::chr5:34728676..34728679,+#_56ffc9fdd65a5eb25290cef93119d6e8 | p26@RAI14 |
| 1.48e-40 | FFCP PHASE1:Hg19::chr5:34728676..34728679,+#_56ffc9fdd65a5eb25290cef93119d6e8 | p26@RAI14 |
| 2.21e-40 | FFCP PHASE2:Hg19::chr15:41062022..41062028,+#_1a67970a3b27abf9ff24b046227a18bf | p3@C15orf62 |
| 2.21e-40 | FFCP PHASE1:Hg19::chr15:41062022..41062028,+#_1a67970a3b27abf9ff24b046227a18bf | p3@C15orf62 |
| 3.3e-40 | FFCP PHASE1:Hg19::chr4:88447806..88447810,+#_30f120b8c11cb2b0c80ffc1625d35361 | p@chr4:88447806..88447810, + |
| 3.3e-40 | FFCP PHASE1:Hg19::chr1:94583454..94583465,-#_30f120b8c11cb2b0c80ffc1625d35361 | p@chr1:94583454..94583465, - |
| 3.3e-40 | FFCP PHASE1:Hg19::chr16:80552480..80552487,-#_30f120b8c11cb2b0c80ffc1625d35361 | p@chr16:80552480..80552487, - |
| 3.3e-40 | FFCP PHASE2:Hg19::chr4:88447806..88447810,+#_30f120b8c11cb2b0c80ffc1625d35361 | p@chr4:88447806..88447810, + |
| 3.3e-40 | FFCP PHASE1:Hg19::chr3:98671855..98671858,+#_30f120b8c11cb2b0c80ffc1625d35361 | p@chr3:98671855..98671858, + |
| 3.3e-40 | FFCP PHASE2:Hg19::chr1:94583454..94583465,-#_30f120b8c11cb2b0c80ffc1625d35361 | p@chr1:94583454..94583465, - |
| 3.3e-40 | FFCP PHASE2:Hg19::chr16:80552480..80552487,-#_30f120b8c11cb2b0c80ffc1625d35361 | p@chr16:80552480..80552487, - |
| 3.3e-40 | FFCP PHASE2:Hg19::chr3:98671855..98671858,+#_30f120b8c11cb2b0c80ffc1625d35361 | p@chr3:98671855..98671858, + |
| 2.58e-34 | FFCP PHASE2:Hg19::chr3:98672197..98672201,+#_0d5ce5cdb930052b42ac7ef43cdfe559 | p@chr3:98672197..98672201, + |
| 2.58e-34 | FFCP PHASE2:Hg19::chr11:31667372..31667383,-#_0d5ce5cdb930052b42ac7ef43cdfe559 | p@chr11:31667372..31667383, - |
| 2.58e-34 | FFCP PHASE1:Hg19::chr3:98672197..98672201,+#_0d5ce5cdb930052b42ac7ef43cdfe559 | p@chr3:98672197..98672201, + |
| 2.58e-34 | FFCP PHASE1:Hg19::chr11:31667372..31667383,-#_0d5ce5cdb930052b42ac7ef43cdfe559 | p@chr11:31667372..31667383, - |
| 3.61e-34 | FFCP PHASE2:Hg19::chr15:69339407..69339410,+#_97ea7338b708cc8efda0dd3d46df3f30 | p3@NOX5 |
| 3.61e-34 | FFCP PHASE1:Hg19::chr15:69339407..69339410,+#_97ea7338b708cc8efda0dd3d46df3f30 | p3@NOX5 |
| 7.06e-34 | FFCP PHASE2:Hg19::chr1:8938123..8938135,-#_3ddb1b2f9a86308e53ff815d2833a8ad | p3@ENO1-IT1 |
| 7.06e-34 | FFCP PHASE1:Hg19::chr1:8938123..8938135,-#_3ddb1b2f9a86308e53ff815d2833a8ad | p3@ENO1-IT1 |
| 7.06e-34 | FFCP PHASE2:Hg19::chr14:85705824..85705844,-#_3ddb1b2f9a86308e53ff815d2833a8ad | p1@ENST00000556016 |
| 7.06e-34 | FFCP PHASE1:Hg19::chr14:85705824..85705844,-#_3ddb1b2f9a86308e53ff815d2833a8ad | p1@ENST00000556016 |
| 7.06e-34 | FFCP PHASE2:Hg19::chr14:61929802..61929817,+#_3ddb1b2f9a86308e53ff815d2833a8ad | p35@PRKCH |
| 7.06e-34 | FFCP PHASE1:Hg19::chr14:61929802..61929817,+#_3ddb1b2f9a86308e53ff815d2833a8ad | p35@PRKCH |
| 7.48e-30 | FFCP PHASE1:Hg19::chr8:53853672..53853682,-#_bf5b8c18089b445675dbacb34966e2e8 | p1@BC033145 |
| 7.48e-30 | FFCP PHASE2:Hg19::chr8:53853672..53853682,-#_bf5b8c18089b445675dbacb34966e2e8 | p1@BC033145 |
| 9.99e-30 | FFCP PHASE1:Hg19::chr9:75489043..75489052,-#_7e3e5169fda8330d72931f50ed6df6e7 | p1@ENST00000453787 |
| 9.99e-30 | FFCP PHASE2:Hg19::chr9:75489043..75489052,-#_7e3e5169fda8330d72931f50ed6df6e7 | p1@ENST00000453787 |
| 1.33e-29 | FFCP PHASE1:Hg19::chr7:43417422..43417435,+#_d8fbe24e71cfc749b62bd5d27d6df4fd | p16@HECW1 |
| 1.33e-29 | FFCP PHASE2:Hg19::chr7:43417422..43417435,+#_d8fbe24e71cfc749b62bd5d27d6df4fd | p16@HECW1 |
| 2.37e-29 | FFCP PHASE1:Hg19::chr21:16374688..16374703,-#_64f9df93c1e1df8cd6164969e5195d21 | p6@NRIP1 |
| 2.37e-29 | FFCP PHASE2:Hg19::chr21:16374688..16374703,-#_64f9df93c1e1df8cd6164969e5195d21 | p6@NRIP1 |
| 3.16e-29 | FFCP PHASE1:Hg19::chr7:151433200..151433217,-#_d38daf326324c720b3ab66d267e517c1 | p31@PRKAG2 |
| 3.16e-29 | FFCP PHASE2:Hg19::chr10:91043389..91043400,+#_d38daf326324c720b3ab66d267e517c1 | p3@ENST00000444849 |
| 3.16e-29 | FFCP PHASE2:Hg19::chr7:151433200..151433217,-#_d38daf326324c720b3ab66d267e517c1 | p31@PRKAG2 |
| 3.16e-29 | FFCP PHASE1:Hg19::chr10:91043389..91043400,+#_d38daf326324c720b3ab66d267e517c1 | p3@ENST00000444849 |
| 4.2e-29 | FFCP PHASE1:Hg19::chr12:13025302..13025313,+#_4b3e3f4b19b95af90043664dec717945 | p@chr12:13025302..13025313, + |
| 4.2e-29 | FFCP PHASE2:Hg19::chr12:13025302..13025313,+#_4b3e3f4b19b95af90043664dec717945 | p@chr12:13025302..13025313, + |
| 5.93e-26 | FFCP PHASE1:Hg19::chr6:125540724..125540736,+#_0386ce40499aac81dc48d08482665643 | p12@TPD52L1 |
| 5.93e-26 | FFCP PHASE2:Hg19::chr6:125540724..125540736,+#_0386ce40499aac81dc48d08482665643 | p12@TPD52L1 |
| 9.79e-26 | FFCP PHASE1:Hg19::chr21:41160614..41160621,+#_53c288489428d2de14ab2042aaee147d | p@chr21:41160614..41160621, + |
| 9.79e-26 | FFCP PHASE2:Hg19::chr21:41160614..41160621,+#_53c288489428d2de14ab2042aaee147d | p@chr21:41160614..41160621, + |
| 2.1e-23 | FFCP PHASE2:Hg19::chr14:61929948..61929975,+#_b36d0c17176e992cb790186d346d55e7 | p20@PRKCH |
| 2.1e-23 | FFCP PHASE1:Hg19::chr14:61929948..61929975,+#_b36d0c17176e992cb790186d346d55e7 | p20@PRKCH |
| 4.1e-23 | FFCP PHASE1:Hg19::chr2:16804394..16804406,-#_eec5b34d37ff74e6f4b7b35c1fff6855 | p6@FAM49A |
| 4.1e-23 | FFCP PHASE2:Hg19::chr2:16804394..16804406,-#_eec5b34d37ff74e6f4b7b35c1fff6855 | p6@FAM49A |
| 1.88e-21 | FFCP PHASE1:Hg19::chr3:55002159..55002164,+#_56bc394fc8e202b021d41aa23761c397 | p@chr3:55002159..55002164, + |
| 1.88e-21 | FFCP PHASE2:Hg19::chr3:55002159..55002164,+#_56bc394fc8e202b021d41aa23761c397 | p@chr3:55002159..55002164, + |
| 4.22e-21 | FFCP PHASE2:Hg19::chr21:16374660..16374679,-#_72a23d6460c071e520f26e311a96cd47 | p4@NRIP1 |
| 4.22e-21 | FFCP PHASE1:Hg19::chr21:16374660..16374679,-#_72a23d6460c071e520f26e311a96cd47 | p4@NRIP1 |
| 6.31e-21 | FFCP PHASE2:Hg19::chr8:145011875..145011879,+#_f50f5d28e88c875e938fd6669ced3844 | p@chr8:145011875..145011879, + |
| 6.31e-21 | FFCP PHASE1:Hg19::chr8:145011875..145011879,+#_f50f5d28e88c875e938fd6669ced3844 | p@chr8:145011875..145011879, + |
| 6.31e-21 | FFCP PHASE1:Hg19::chr10:91043499..91043510,+#_f50f5d28e88c875e938fd6669ced3844 | p2@ENST00000354541 |
| 6.31e-21 | FFCP PHASE2:Hg19::chr10:91043499..91043510,+#_f50f5d28e88c875e938fd6669ced3844 | p2@ENST00000354541 |
| 7.72e-21 | FFCP PHASE2:Hg19::chr11:31014065..31014073,-#_c8a8bc3ae7babec1400c0bfe93647974 | p1@DCDC5 |
| 7.72e-21 | FFCP PHASE2:Hg19::chr8:124692287..124692298,+#_c8a8bc3ae7babec1400c0bfe93647974 | p@chr8:124692287..124692298, + |
| 7.72e-21 | FFCP PHASE2:Hg19::chr15:67524744..67524745,+#_c8a8bc3ae7babec1400c0bfe93647974 | p1@ENST00000497294 |
| 7.72e-21 | FFCP PHASE1:Hg19::chr15:67524744..67524745,+#_c8a8bc3ae7babec1400c0bfe93647974 | p1@ENST00000497294 |
| 7.72e-21 | FFCP PHASE1:Hg19::chr11:31014065..31014073,-#_c8a8bc3ae7babec1400c0bfe93647974 | p1@DCDC5 |
| 7.72e-21 | FFCP PHASE1:Hg19::chr8:124692287..124692298,+#_c8a8bc3ae7babec1400c0bfe93647974 | p@chr8:124692287..124692298, + |
| 9.43e-21 | FFCP PHASE2:Hg19::chr3:150690508..150690520,-#_2c368347968a8719e51db1ac81f658fb | p1@CLRN1 |
| 9.43e-21 | FFCP PHASE1:Hg19::chr3:150690508..150690520,-#_2c368347968a8719e51db1ac81f658fb | p1@CLRN1 |
| 1.3e-19 | FFCP PHASE2:Hg19::chr14:87636652..87636657,-#_43efb6e1a71b612051c4f6c0d22b4990 | p@chr14:87636652..87636657, - |
| 1.3e-19 | FFCP PHASE1:Hg19::chr14:87636652..87636657,-#_43efb6e1a71b612051c4f6c0d22b4990 | p@chr14:87636652..87636657, - |
| 2.25e-19 | FFCP PHASE2:Hg19::chr14:61929781..61929801,+#_415965b86688b1c404782fc84b88216a | p27@PRKCH |
| 2.25e-19 | FFCP PHASE1:Hg19::chr14:61929781..61929801,+#_415965b86688b1c404782fc84b88216a | p27@PRKCH |
| 3.25e-19 | FFCP PHASE2:Hg19::chrX:106243285..106243290,-#_cd0344f02029e3794c1800b37ce2d4ad | p8@MORC4 |
| 3.25e-19 | FFCP PHASE2:Hg19::chr3:147131290..147131301,+#_cd0344f02029e3794c1800b37ce2d4ad | p@chr3:147131290..147131301, + |
| 3.25e-19 | FFCP PHASE1:Hg19::chrX:106243285..106243290,-#_cd0344f02029e3794c1800b37ce2d4ad | p8@MORC4 |
| 3.25e-19 | FFCP PHASE1:Hg19::chr3:147131290..147131301,+#_cd0344f02029e3794c1800b37ce2d4ad | p@chr3:147131290..147131301, + |
| 3.91e-19 | FFCP PHASE2:Hg19::chr14:62037117..62037132,+#_2cd3196c0b6e39e13ce8c2bee98578b5 | p7@FLJ22447 |
| 3.91e-19 | FFCP PHASE1:Hg19::chr14:62037117..62037132,+#_2cd3196c0b6e39e13ce8c2bee98578b5 | p7@FLJ22447 |
| 4.44e-18 | FFCP PHASE2:Hg19::chr4:150666211..150666212,+#_ed809b2ceb1b79330b4fbfc8bd8786b9 | p@chr4:150666211..150666212, + |
| 4.44e-18 | FFCP PHASE1:Hg19::chr4:150666211..150666212,+#_ed809b2ceb1b79330b4fbfc8bd8786b9 | p@chr4:150666211..150666212, + |
| 5.26e-18 | FFCP PHASE1:Hg19::chr1:29586692..29586705,+#_0eda4cfd0c9e1dfcf8a48bd001e30e65 | p7@PTPRU |
| 5.26e-18 | FFCP PHASE2:Hg19::chr1:29586692..29586705,+#_0eda4cfd0c9e1dfcf8a48bd001e30e65 | p7@PTPRU |
| 6.23e-18 | FFCP PHASE1:Hg19::chr5:138852090..138852095,+#_569e051fa084d45d9c53cdfdce471248 | p@chr5:138852090..138852095, + |
| 6.23e-18 | FFCP PHASE2:Hg19::chr5:138852090..138852095,+#_569e051fa084d45d9c53cdfdce471248 | p@chr5:138852090..138852095, + |
