Personal tools

CL:0002544: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{CL
{{CL
|id=CL:0002544
|alt_id=
|name=aortic endothelial cell
|namespace=cell
|def="An arterial endothelial cell that is part of the aorta endothelium." [GOC:tfm]
|xref=BTO:0003245
|is_a=CL:1000413
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=tmeehan
|created_by=tmeehan
|obo_creation_date=2011-02-28T03:54:42Z
|def="An arterial endothelial cell that is part of the aorta endothelium." [GOC:tfm]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0002544
|is_a=CL:1000413
|is_obsolete=
|located_in=
|located_in=
|name=aortic endothelial cell
|namespace=cell
|obo_creation_date=2011-02-28T03:54:42Z
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=BTO:0003245
}}
}}

Revision as of 10:28, 12 September 2014

Name:aortic endothelial cell
Namespace:cell
Definition:"An arterial endothelial cell that is part of the aorta endothelium." [GOC:tfm]
Xrefs:
links:
BTO:0003245
Created by:tmeehan
Creation date:2011-02-28T03:54:42Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:1000413(endothelial cell of artery)



Children


is a:CL:0002545 (thoracic aorta endothelial cell)
derives from:FF:0000048 (human endothelial cell of the aorta sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002544 (aortic endothelial cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
3.1e-59FFCP PHASE1:Hg19::chr12:105863705..105863718,+#_896eef77dd10a5275698dbc936e96430p@chr12:105863705..105863718, +
3.1e-59FFCP PHASE2:Hg19::chr12:105863705..105863718,+#_896eef77dd10a5275698dbc936e96430p@chr12:105863705..105863718, +
2.12e-58FFCP PHASE1:Hg19::chr5:63803524..63803561,+#_6040fc9b4b7b4a04b3ff0829c0f4aedap15@RGS7BP
2.12e-58FFCP PHASE2:Hg19::chr5:63803524..63803561,+#_6040fc9b4b7b4a04b3ff0829c0f4aedap15@RGS7BP
5.77e-58FFCP PHASE2:Hg19::chr14:75469820..75469826,+#_d7f3e20ff3c004650269172a8610d443p4@EIF2B2
5.77e-58FFCP PHASE1:Hg19::chr14:75469820..75469826,+#_d7f3e20ff3c004650269172a8610d443p4@EIF2B2
5.92e-57FFCP PHASE1:Hg19::chr18:33046982..33046991,-#_b12395401c898e416e32b5ac9ae8ce22p@chr18:33046982..33046991, -
5.92e-57FFCP PHASE2:Hg19::chr18:33046982..33046991,-#_b12395401c898e416e32b5ac9ae8ce22p@chr18:33046982..33046991, -
1.55e-56FFCP PHASE2:Hg19::chr7:139741594..139741615,-#_31099ccd623ca61355497558fcc9331fp5@PARP12
1.55e-56FFCP PHASE1:Hg19::chr7:139741594..139741615,-#_31099ccd623ca61355497558fcc9331fp5@PARP12
7.9e-53FFCP PHASE1:Hg19::chr6:11607864..11607875,+#_954f4dade5097be7d70e72b49b47398bp@chr6:11607864..11607875, +
7.9e-53FFCP PHASE2:Hg19::chr6:11607864..11607875,+#_954f4dade5097be7d70e72b49b47398bp@chr6:11607864..11607875, +
3.82e-52FFCP PHASE2:Hg19::chr15:39722548..39722553,+#_3ece8bc14061fc2d2631b063c5be83a4p@chr15:39722548..39722553, +
3.82e-52FFCP PHASE1:Hg19::chr15:39722548..39722553,+#_3ece8bc14061fc2d2631b063c5be83a4p@chr15:39722548..39722553, +
4.97e-52FFCP PHASE2:Hg19::chr6:78171774..78171792,+#_f537876c768bc1acbe0f629a022b8f73p@chr6:78171774..78171792, +
4.97e-52FFCP PHASE1:Hg19::chr6:78171774..78171792,+#_f537876c768bc1acbe0f629a022b8f73p@chr6:78171774..78171792, +
8.2e-51FFCP PHASE1:Hg19::chrX:128781635..128781648,-#_d2a34de5577b81ff6c05a5acc9bd158ep@chrX:128781635..128781648, -
8.2e-51FFCP PHASE2:Hg19::chrX:128781635..128781648,-#_d2a34de5577b81ff6c05a5acc9bd158ep@chrX:128781635..128781648, -
1.05e-50FFCP PHASE1:Hg19::chr7:150329732..150329739,-#_56eb260f92ae54c61085c92a1ad09d95p8@GIMAP6
1.05e-50FFCP PHASE2:Hg19::chr7:150329732..150329739,-#_56eb260f92ae54c61085c92a1ad09d95p8@GIMAP6
6.35e-50FFCP PHASE2:Hg19::chrX:26933473..26933478,+#_586b91caef1447ffa5b4978564112a74p@chrX:26933473..26933478, +
6.35e-50FFCP PHASE1:Hg19::chrX:26933473..26933478,+#_586b91caef1447ffa5b4978564112a74p@chrX:26933473..26933478, +
1.77e-48FFCP PHASE1:Hg19::chr9:133992897..133992908,+#_c913676ca53d3f47ad19362d9f3c791fp@chr9:133992897..133992908, +
1.77e-48FFCP PHASE2:Hg19::chr9:133992897..133992908,+#_c913676ca53d3f47ad19362d9f3c791fp@chr9:133992897..133992908, +
6.73e-48FFCP PHASE2:Hg19::chr7:139741849..139741879,-#_a7042ade037395a2bf109456983586a6p12@PARP12
6.73e-48FFCP PHASE1:Hg19::chr7:139741849..139741879,-#_a7042ade037395a2bf109456983586a6p12@PARP12
2.21e-46FFCP PHASE2:Hg19::chr1:22264210..22264241,+#_4b71b2839f6bb5f7ca86e9210da5e8d2p@chr1:22264210..22264241, +
2.21e-46FFCP PHASE1:Hg19::chr1:22264210..22264241,+#_4b71b2839f6bb5f7ca86e9210da5e8d2p@chr1:22264210..22264241, +
2.9e-46FFCP PHASE2:Hg19::chr1:16076084..16076098,-#_696edded2742ac6b59fab79457320680p2@ENST00000418525
2.9e-46FFCP PHASE1:Hg19::chr1:16076084..16076098,-#_696edded2742ac6b59fab79457320680p2@ENST00000418525
8.1e-46FFCP PHASE2:Hg19::chr20:62670299..62670342,-#_18fa99238dda2c2b8ce63972e2360952p8@ZNF512B
8.1e-46FFCP PHASE1:Hg19::chr20:62670299..62670342,-#_18fa99238dda2c2b8ce63972e2360952p8@ZNF512B
2.28e-45FFCP PHASE1:Hg19::chr18:33047157..33047168,-#_0d9af40b5bdeffa84b4877078775679ep@chr18:33047157..33047168, -
2.28e-45FFCP PHASE2:Hg19::chr18:33047157..33047168,-#_0d9af40b5bdeffa84b4877078775679ep@chr18:33047157..33047168, -
4.83e-44FFCP PHASE2:Hg19::chr21:39869867..39869880,-#_ed080d59aee4bc4594d2173ee1982fb9p@chr21:39869867..39869880, -
4.83e-44FFCP PHASE1:Hg19::chr21:39869867..39869880,-#_ed080d59aee4bc4594d2173ee1982fb9p@chr21:39869867..39869880, -
2.25e-43FFCP PHASE2:Hg19::chr2:56216687..56216727,-#_f60c1209a9057ee1a69bc636dc7e2897p1@MIR216A
2.25e-43FFCP PHASE1:Hg19::chr2:56216687..56216727,-#_f60c1209a9057ee1a69bc636dc7e2897p1@MIR216A
9.47e-42FFCP PHASE1:Hg19::chr10:50153735..50153750,+#_f5a58f63defedf09e09b4ce94e907192p6@WDFY4
9.47e-42FFCP PHASE2:Hg19::chr10:50153735..50153750,+#_f5a58f63defedf09e09b4ce94e907192p6@WDFY4
4.61e-41FFCP PHASE2:Hg19::chrX:15518894..15518905,+#_695b7f4a58d43aaa4652c8dd46e0d4a5p2@BMX
4.61e-41FFCP PHASE1:Hg19::chrX:15518894..15518905,+#_695b7f4a58d43aaa4652c8dd46e0d4a5p2@BMX
1.77e-40FFCP PHASE1:Hg19::chr11:124761247..124761258,-#_b173b05234e2d3b9d55de4051198da4ep@chr11:124761247..124761258, -
1.77e-40FFCP PHASE2:Hg19::chr11:124761247..124761258,-#_b173b05234e2d3b9d55de4051198da4ep@chr11:124761247..124761258, -
1.97e-39FFCP PHASE2:Hg19::chr6:148664333..148664338,-#_fe4ae5418b531ebbd2b1f13c4f5b2781p@chr6:148664333..148664338, -
1.97e-39FFCP PHASE1:Hg19::chr6:148664333..148664338,-#_fe4ae5418b531ebbd2b1f13c4f5b2781p@chr6:148664333..148664338, -
2.05e-39FFCP PHASE2:Hg19::chr5:95920642..95920681,+#_ba5be0f5bf1db5d1ea9a7baa4872a2cdp1@ENST00000513158
2.05e-39FFCP PHASE1:Hg19::chr5:95920642..95920681,+#_ba5be0f5bf1db5d1ea9a7baa4872a2cdp1@ENST00000513158
2.93e-39FFCP PHASE1:Hg19::chr7:81662303..81662321,-#_38ab3a88f8a423b4fca15af4613567f4p8@CACNA2D1
2.93e-39FFCP PHASE2:Hg19::chr7:81662303..81662321,-#_38ab3a88f8a423b4fca15af4613567f4p8@CACNA2D1
3.04e-39FFCP PHASE2:Hg19::chr9:139543390..139543404,+#_8f2eb0f1dc42dcdcd35a1109dcef5d52p@chr9:139543390..139543404, +
3.04e-39FFCP PHASE1:Hg19::chr9:139543390..139543404,+#_8f2eb0f1dc42dcdcd35a1109dcef5d52p@chr9:139543390..139543404, +
4.03e-39FFCP PHASE2:Hg19::chr13:32838839..32838850,+#_089331c5cc9c18e4911bc48ae829f15fp20@FRY
4.03e-39FFCP PHASE1:Hg19::chr13:32838839..32838850,+#_089331c5cc9c18e4911bc48ae829f15fp20@FRY
4.23e-39FFCP PHASE1:Hg19::chr12:105863636..105863650,+#_e43e818e628605eb873287748fe45590p@chr12:105863636..105863650, +
4.23e-39FFCP PHASE2:Hg19::chr12:105863636..105863650,+#_e43e818e628605eb873287748fe45590p@chr12:105863636..105863650, +
1.35e-38FFCP PHASE2:Hg19::chr5:34656634..34656645,+#_e3790b6944933a846bcbe050395e1b0ep15@RAI14
1.35e-38FFCP PHASE1:Hg19::chr5:34656634..34656645,+#_e3790b6944933a846bcbe050395e1b0ep15@RAI14
2.92e-38FFCP PHASE2:Hg19::chr1:16076122..16076138,-#_886f67e48a99c4f1b5b078e8a04a3d51p1@ENST00000418525
2.92e-38FFCP PHASE1:Hg19::chr1:16076122..16076138,-#_886f67e48a99c4f1b5b078e8a04a3d51p1@ENST00000418525
3.65e-38FFCP PHASE2:Hg19::chrX:71299684..71299699,+#_25eeef027a4770cfec667d62f16ac35bp@chrX:71299684..71299699, +
3.65e-38FFCP PHASE1:Hg19::chrX:71299684..71299699,+#_25eeef027a4770cfec667d62f16ac35bp@chrX:71299684..71299699, +
5.48e-38FFCP PHASE2:Hg19::chr5:141337703..141337712,-#_7c2a092219096efe4f41c3298211403dp4@PCDH12
5.48e-38FFCP PHASE1:Hg19::chr5:141337703..141337712,-#_7c2a092219096efe4f41c3298211403dp4@PCDH12
6.38e-38FFCP PHASE1:Hg19::chr6:112538096..112538101,+#_743eb7d3e9112b057bb6db055bd2c291p@chr6:112538096..112538101, +
6.38e-38FFCP PHASE2:Hg19::chr6:112538096..112538101,+#_743eb7d3e9112b057bb6db055bd2c291p@chr6:112538096..112538101, +
7.3e-38FFCP PHASE1:Hg19::chr16:81644068..81644075,+#_81e295d6c7ed6fe004101812e2292013p14@CMIP
7.3e-38FFCP PHASE2:Hg19::chr16:81644068..81644075,+#_81e295d6c7ed6fe004101812e2292013p14@CMIP
1.72e-37FFCP PHASE2:Hg19::chr9:139937688..139937698,-#_25777518032a1565a2589775a16081c9p15@NPDC1
1.72e-37FFCP PHASE1:Hg19::chr9:139937688..139937698,-#_25777518032a1565a2589775a16081c9p15@NPDC1
1.85e-37FFCP PHASE2:Hg19::chr5:176433333..176433349,-#_7a3473fb981a2b6ea44dd5daab6c4abfp11@UIMC1
1.85e-37FFCP PHASE1:Hg19::chr5:176433333..176433349,-#_7a3473fb981a2b6ea44dd5daab6c4abfp11@UIMC1
2.95e-37FFCP PHASE2:Hg19::chr14:38725249..38725254,-#_90443d3c99c011145cbd74b8febacb20p6@CLEC14A
2.95e-37FFCP PHASE1:Hg19::chr14:38725249..38725254,-#_90443d3c99c011145cbd74b8febacb20p6@CLEC14A
3.21e-37FFCP PHASE2:Hg19::chr16:66420782..66420796,+#_342aacb5f9db9733a5201c6b534e9cdfp@chr16:66420782..66420796, +
3.21e-37FFCP PHASE1:Hg19::chr16:66420782..66420796,+#_342aacb5f9db9733a5201c6b534e9cdfp@chr16:66420782..66420796, +
1.32e-36FFCP PHASE2:Hg19::chr9:139541134..139541139,+#_201edd33ea5c8d2c0dc2c5a6d7e96ecdp@chr9:139541134..139541139, +
1.32e-36FFCP PHASE1:Hg19::chr9:139541134..139541139,+#_201edd33ea5c8d2c0dc2c5a6d7e96ecdp@chr9:139541134..139541139, +
2.37e-36FFCP PHASE1:Hg19::chr7:106720036..106720059,-#_5701381692d0b1cdf5e2b78adf9eef2dp@chr7:106720036..106720059, -
2.37e-36FFCP PHASE2:Hg19::chr7:106720036..106720059,-#_5701381692d0b1cdf5e2b78adf9eef2dp@chr7:106720036..106720059, -
2.45e-36FFCP PHASE2:Hg19::chr5:141337686..141337697,-#_643002699def6706a88d5c0112f9baf0p2@PCDH12
2.45e-36FFCP PHASE1:Hg19::chr5:141337686..141337697,-#_643002699def6706a88d5c0112f9baf0p2@PCDH12
2.55e-36FFCP PHASE1:Hg19::chr4:5035083..5035101,-#_346d655d6325bc49c97c51148bcc4c76p@chr4:5035083..5035101, -
2.55e-36FFCP PHASE2:Hg19::chr4:5035083..5035101,-#_346d655d6325bc49c97c51148bcc4c76p@chr4:5035083..5035101, -
8.22e-36FFCP PHASE1:Hg19::chr6:3753188..3753192,-#_d6e9dba65c36b503ed860ea0163f9554p@chr6:3753188..3753192, -
8.22e-36FFCP PHASE2:Hg19::chr6:3753188..3753192,-#_d6e9dba65c36b503ed860ea0163f9554p@chr6:3753188..3753192, -
8.78e-36FFCP PHASE2:Hg19::chr12:96830523..96830532,+#_68558da65185c009287fe7145c73e3a2p@chr12:96830523..96830532, +
8.78e-36FFCP PHASE1:Hg19::chr12:96830523..96830532,+#_68558da65185c009287fe7145c73e3a2p@chr12:96830523..96830532, +
1.38e-35FFCP PHASE1:Hg19::chr12:118112251..118112272,-#_037c8322b2b88fe35dceae01c5e5106ep12@KSR2
1.38e-35FFCP PHASE2:Hg19::chr12:118112251..118112272,-#_037c8322b2b88fe35dceae01c5e5106ep12@KSR2
2.15e-35FFCP PHASE1:Hg19::chr12:52300746..52300751,+#_408bfa5812e78898421dc735f7eb4258p10@ACVRL1
2.15e-35FFCP PHASE2:Hg19::chr12:52300746..52300751,+#_408bfa5812e78898421dc735f7eb4258p10@ACVRL1
3.05e-35FFCP PHASE2:Hg19::chr6:78171746..78171769,+#_b5bae951115eda280da3d0fa47342dd9p@chr6:78171746..78171769, +
3.05e-35FFCP PHASE1:Hg19::chr6:78171746..78171769,+#_b5bae951115eda280da3d0fa47342dd9p@chr6:78171746..78171769, +
5.92e-35FFCP PHASE2:Hg19::chr14:38725228..38725236,-#_f41f15a9f08efd3a2143b10a804b6029p5@CLEC14A
5.92e-35FFCP PHASE1:Hg19::chr14:38725228..38725236,-#_f41f15a9f08efd3a2143b10a804b6029p5@CLEC14A
8.27e-35FFCP PHASE1:Hg19::chr11:124764093..124764097,-#_9a3db85c02f0f87e3694aa2ad9f7b4e9p4@ROBO4
8.27e-35FFCP PHASE2:Hg19::chr11:124764093..124764097,-#_9a3db85c02f0f87e3694aa2ad9f7b4e9p4@ROBO4
1.48e-34FFCP PHASE2:Hg19::chrX:107068687..107068703,+#_d8bd36238aca85da466d6fca07934fffp6@MID2
1.48e-34FFCP PHASE1:Hg19::chrX:107068687..107068703,+#_d8bd36238aca85da466d6fca07934fffp6@MID2

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=CL:0002544&oldid=3272156"