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{{CL
{{CL
|id=CL:0002603
|alt_id=
|name=astrocyte of the cerebellum
|namespace=cell
|def="An astrocyte of the cerebellum." [GOC:tfm]
|xref=
|is_a=CL:0000127
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=tmeehan
|created_by=tmeehan
|obo_creation_date=2011-03-06T06:57:27Z
|def="An astrocyte of the cerebellum." [GOC:tfm]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0002603
|is_a=CL:0000127 ;;CL:2000005
|is_obsolete=
|located_in=
|located_in=
|name=astrocyte of the cerebellum
|namespace=cell
|obo_creation_date=2011-03-06T06:57:27Z
|part_of=UBERON:0002037
|part_of=UBERON:0002037
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=
}}
}}

Revision as of 10:30, 12 September 2014

Name:astrocyte of the cerebellum
Namespace:cell
Definition:"An astrocyte of the cerebellum." [GOC:tfm]
Created by:tmeehan
Creation date:2011-03-06T06:57:27Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000127(astrocyte),CL:2000005(brain macroglial cell)
part_of:UBERON:0002037(cerebellum)



Children


derives from:FF:0000195 (human astrocyte of the cerebellum sample),FF:0000196 (mouse astrocyte of cerebellum sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002603 (astrocyte of the cerebellum), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.55e-98FFCP PHASE1:Hg19::chr11:60615014..60615025,+#_2bfed9228d5aa022dcb5f65a895b92cep8@CCDC86
1.55e-98FFCP PHASE2:Hg19::chr11:60615014..60615025,+#_2bfed9228d5aa022dcb5f65a895b92cep8@CCDC86
3.54e-74FFCP PHASE1:Hg19::chr11:60615052..60615066,+#_d1d2a2d2c170a75c707c0d11fb6dc68bp9@CCDC86
3.54e-74FFCP PHASE2:Hg19::chr11:60615052..60615066,+#_d1d2a2d2c170a75c707c0d11fb6dc68bp9@CCDC86
3.35e-66FFCP PHASE1:Hg19::chr6:45626924..45626929,+#_9ef59b7be59064193bcb5a0a42d54186p@chr6:45626924..45626929, +
3.35e-66FFCP PHASE2:Hg19::chr6:45626924..45626929,+#_9ef59b7be59064193bcb5a0a42d54186p@chr6:45626924..45626929, +
1.25e-54FFCP PHASE1:Hg19::chr7:155256607..155256614,+#_079f1d4e1b56998c04ff5f24005aa7bdp@chr7:155256607..155256614, +
1.25e-54FFCP PHASE2:Hg19::chr7:155256607..155256614,+#_079f1d4e1b56998c04ff5f24005aa7bdp@chr7:155256607..155256614, +
3.75e-53FFCP PHASE2:Hg19::chr10:48439285..48439302,-#_b67ea1cb86f4f5ea6dbe2fcfeabb439dp4@GDF10
3.75e-53FFCP PHASE1:Hg19::chr10:48439285..48439302,-#_b67ea1cb86f4f5ea6dbe2fcfeabb439dp4@GDF10
2.33e-49FFCP PHASE1:Hg19::chr3:147115400..147115411,+#_018a782047b13fb0949e5129f0f481c3p@chr3:147115400..147115411, +
2.33e-49FFCP PHASE2:Hg19::chr3:147115400..147115411,+#_018a782047b13fb0949e5129f0f481c3p@chr3:147115400..147115411, +
5.0e-45FFCP PHASE2:Hg19::chr2:237076971..237076978,-#_70ccbde30f646206f53055412757d7b3p3@GBX2
5.0e-45FFCP PHASE1:Hg19::chr2:237076971..237076978,-#_70ccbde30f646206f53055412757d7b3p3@GBX2
5.0e-45FFCP PHASE1:Hg19::chr11:68808268..68808276,-#_70ccbde30f646206f53055412757d7b3p@chr11:68808268..68808276, -
5.0e-45FFCP PHASE2:Hg19::chr11:68808268..68808276,-#_70ccbde30f646206f53055412757d7b3p@chr11:68808268..68808276, -
2.75e-44FFCP PHASE2:Mm9::chr7:29152679..29152684,-#_70bdf8f3add3af57ac5a5b7ee861f62ep@chr7:29152679..29152684, -
2.75e-44FFCP PHASE1:Mm9::chr7:29152679..29152684,-#_70bdf8f3add3af57ac5a5b7ee861f62ep@chr7:29152679..29152684, -
1.24e-43FFCP PHASE2:Mm9::chr9:43915826..43915844,+#_cd96e0b8596c95822ed4d74056cd318bp@chr9:43915826..43915844, +
1.24e-43FFCP PHASE1:Mm9::chr9:43915826..43915844,+#_cd96e0b8596c95822ed4d74056cd318bp@chr9:43915826..43915844, +
3.83e-40FFCP PHASE1:Hg19::chr22:30176932..30176938,+#_b77a01871c103324d39c9ed2d61421bep@chr22:30176932..30176938, +
3.83e-40FFCP PHASE2:Hg19::chr22:30176932..30176938,+#_b77a01871c103324d39c9ed2d61421bep@chr22:30176932..30176938, +
7.48e-40FFCP PHASE1:Hg19::chr3:147115338..147115349,+#_aef4ccb593810b54962aa9c1202b8a33p@chr3:147115338..147115349, +
7.48e-40FFCP PHASE2:Hg19::chr3:147115338..147115349,+#_aef4ccb593810b54962aa9c1202b8a33p@chr3:147115338..147115349, +
6.91e-39FFCP PHASE2:Hg19::chr10:48439044..48439053,-#_2ed80f7ba1d4679481936f9bac075334p5@GDF10
6.91e-39FFCP PHASE1:Hg19::chr10:48439044..48439053,-#_2ed80f7ba1d4679481936f9bac075334p5@GDF10
9.75e-39FFCP PHASE1:Hg19::chr3:147127358..147127369,+#_722f7e5a9f5d6fea38ad71b5c63cae24p16@ZIC1
9.75e-39FFCP PHASE2:Hg19::chr3:147127358..147127369,+#_722f7e5a9f5d6fea38ad71b5c63cae24p16@ZIC1
3.48e-38FFCP PHASE1:Hg19::chr7:192343..192350,+#_8294970ddcc69d9bf22194965de65962p@chr7:192343..192350, +
3.48e-38FFCP PHASE2:Hg19::chr7:192343..192350,+#_8294970ddcc69d9bf22194965de65962p@chr7:192343..192350, +
2.6e-37FFCP PHASE1:Hg19::chr3:147112699..147112713,-#_e4a1f6a117d5c6d94db978db31ac1bf8p@chr3:147112699..147112713, -
2.6e-37FFCP PHASE2:Hg19::chr3:147112699..147112713,-#_e4a1f6a117d5c6d94db978db31ac1bf8p@chr3:147112699..147112713, -
1.64e-36FFCP PHASE1:Hg19::chr6:44621525..44621566,-#_7554696b5a27e30bf6e8fa2364f31f55p@chr6:44621525..44621566, -
1.64e-36FFCP PHASE2:Hg19::chr6:44621525..44621566,-#_7554696b5a27e30bf6e8fa2364f31f55p@chr6:44621525..44621566, -
6.1e-36FFCP PHASE1:Hg19::chr3:147137194..147137222,+#_27203fa660a066608fd139b68b6b3eb6p1@FLJ30375
6.1e-36FFCP PHASE2:Hg19::chr3:147137194..147137222,+#_27203fa660a066608fd139b68b6b3eb6p1@FLJ30375
1.4e-35FFCP PHASE1:Hg19::chr9:16138889..16138902,-#_3468a69374130779dc4ca3fa074f0903p@chr9:16138889..16138902, -
1.4e-35FFCP PHASE2:Hg19::chr9:16138889..16138902,-#_3468a69374130779dc4ca3fa074f0903p@chr9:16138889..16138902, -
5.96e-34FFCP PHASE1:Hg19::chr19:5217451..5217456,-#_6abef80655cc31b870732183e7b3d440p@chr19:5217451..5217456, -
5.96e-34FFCP PHASE2:Hg19::chr19:5217451..5217456,-#_6abef80655cc31b870732183e7b3d440p@chr19:5217451..5217456, -
1.47e-30FFCP PHASE2:Hg19::chr10:48439197..48439208,-#_9b89b4917b746d7741729c6268195ca2p3@GDF10
1.47e-30FFCP PHASE1:Hg19::chr10:48439197..48439208,-#_9b89b4917b746d7741729c6268195ca2p3@GDF10
3.1e-30FFCP PHASE1:Hg19::chr2:48919688..48919703,+#_58d4f87cd2e86a2c4adefcec45add2afp@chr2:48919688..48919703, +
3.1e-30FFCP PHASE2:Hg19::chr2:48919688..48919703,+#_58d4f87cd2e86a2c4adefcec45add2afp@chr2:48919688..48919703, +
6.69e-30FFCP PHASE1:Mm9::chr1:72895689..72895698,-#_49ce8af5b6e5daa74f000b47d6bc4f8fp@chr1:72895689..72895698, -
6.69e-30FFCP PHASE2:Mm9::chr1:72895689..72895698,-#_49ce8af5b6e5daa74f000b47d6bc4f8fp@chr1:72895689..72895698, -
2.18e-29FFCP PHASE1:Hg19::chr16:49890003..49890008,-#_02cac2a6d1fbd288e5444b4fab3863adp@chr16:49890003..49890008, -
2.18e-29FFCP PHASE2:Hg19::chr16:49890003..49890008,-#_02cac2a6d1fbd288e5444b4fab3863adp@chr16:49890003..49890008, -
4.71e-29FFCP PHASE1:Hg19::chr4:169552238..169552253,+#_e963f605b4612ac744ddb1c79beeee62p@chr4:169552238..169552253, +
4.71e-29FFCP PHASE2:Hg19::chr4:169552238..169552253,+#_e963f605b4612ac744ddb1c79beeee62p@chr4:169552238..169552253, +
1.22e-27FFCP PHASE1:Hg19::chr9:117880804..117880815,-#_87471fe75b59b96195e0daf18612515cp4@TNC
1.22e-27FFCP PHASE2:Hg19::chr9:117880804..117880815,-#_87471fe75b59b96195e0daf18612515cp4@TNC
1.59e-27FFCP PHASE1:Hg19::chr1:210407103..210407111,-#_33f3a5ba78e12d86ac0e9c3fcae71957p13@C1orf133
1.59e-27FFCP PHASE2:Hg19::chr1:210407103..210407111,-#_33f3a5ba78e12d86ac0e9c3fcae71957p13@C1orf133
3.11e-27FFCP PHASE2:Hg19::chr16:88901909..88901912,-#_e06fecdca54633f3fa9598835c7821e6p4@GALNS
3.11e-27FFCP PHASE1:Hg19::chr16:88901909..88901912,-#_e06fecdca54633f3fa9598835c7821e6p4@GALNS
1.02e-25FFCP PHASE1:Mm9::chr11:102807862..102807882,-#_2ad1e0ec82da08993d7c772bb9fbf460p4@C1ql1
1.02e-25FFCP PHASE2:Mm9::chr11:102807862..102807882,-#_2ad1e0ec82da08993d7c772bb9fbf460p4@C1ql1
1.8e-25FFCP PHASE1:Mm9::chr1:72898789..72898796,+#_e13e592157f60ae0bff5b31eef04272fp@chr1:72898789..72898796, +
1.8e-25FFCP PHASE2:Mm9::chr1:72898789..72898796,+#_e13e592157f60ae0bff5b31eef04272fp@chr1:72898789..72898796, +
2.99e-25FFCP PHASE1:Hg19::chr3:147138953..147138965,+#_76971f563c730c2524c349303704d097p19@ZIC1
2.99e-25FFCP PHASE2:Hg19::chr3:147138953..147138965,+#_76971f563c730c2524c349303704d097p19@ZIC1
4.87e-25FFCP PHASE1:Hg19::chr3:119014478..119014500,+#_02e949eb36744d7b88db01835df02b67p@chr3:119014478..119014500, +
4.87e-25FFCP PHASE2:Hg19::chr3:119014478..119014500,+#_02e949eb36744d7b88db01835df02b67p@chr3:119014478..119014500, +
5.5e-25FFCP PHASE1:Hg19::chr6:46187040..46187045,+#_0a028cc61757eeb7736448cdd32b2034p@chr6:46187040..46187045, +
5.5e-25FFCP PHASE2:Hg19::chr6:46187040..46187045,+#_0a028cc61757eeb7736448cdd32b2034p@chr6:46187040..46187045, +
1.42e-24FFCP PHASE1:Hg19::chr3:147114260..147114290,-#_9a592b95f0c37e84dbce3ad7f5cc8499p3@ZIC4
1.42e-24FFCP PHASE2:Hg19::chr3:147114260..147114290,-#_9a592b95f0c37e84dbce3ad7f5cc8499p3@ZIC4
1.45e-23FFCP PHASE1:Hg19::chr3:8536114..8536125,-#_6e47078e8c4b2e388434bd9e3f7cf111p@chr3:8536114..8536125, -
1.45e-23FFCP PHASE2:Hg19::chr3:8536114..8536125,-#_6e47078e8c4b2e388434bd9e3f7cf111p@chr3:8536114..8536125, -
2.62e-23FFCP PHASE1:Hg19::chr4:86954525..86954527,+#_130c24a1ef5725eb2b8e4883f7ef4bfcp@chr4:86954525..86954527, +
2.62e-23FFCP PHASE2:Hg19::chr4:86954525..86954527,+#_130c24a1ef5725eb2b8e4883f7ef4bfcp@chr4:86954525..86954527, +
2.62e-23FFCP PHASE1:Hg19::chr3:112823266..112823272,-#_130c24a1ef5725eb2b8e4883f7ef4bfcp@chr3:112823266..112823272, -
2.62e-23FFCP PHASE2:Hg19::chr3:112823266..112823272,-#_130c24a1ef5725eb2b8e4883f7ef4bfcp@chr3:112823266..112823272, -
3.06e-23FFCP PHASE2:Mm9::chr8:96704054..96704065,-#_b1721b5978603f6441902a7b07f3997dp@chr8:96704054..96704065, -
3.06e-23FFCP PHASE1:Mm9::chr8:96704054..96704065,-#_b1721b5978603f6441902a7b07f3997dp@chr8:96704054..96704065, -
5.15e-23FFCP PHASE1:Hg19::chr3:147123837..147123848,-#_20fec7527f95673c75e8f24782aca89fp7@ZIC4
5.15e-23FFCP PHASE2:Hg19::chr3:147123837..147123848,-#_20fec7527f95673c75e8f24782aca89fp7@ZIC4
5.75e-23FFCP PHASE1:Mm9::chr1:174137832..174137837,-#_73ac917f6cba2ef77479474434ea5f5fp@chr1:174137832..174137837, -
5.75e-23FFCP PHASE2:Mm9::chr1:174137832..174137837,-#_73ac917f6cba2ef77479474434ea5f5fp@chr1:174137832..174137837, -
5.75e-23FFCP PHASE2:Mm9::chr8:96678044..96678046,-#_73ac917f6cba2ef77479474434ea5f5fp@chr8:96678044..96678046, -
5.75e-23FFCP PHASE1:Mm9::chr8:96678044..96678046,-#_73ac917f6cba2ef77479474434ea5f5fp@chr8:96678044..96678046, -
5.75e-23FFCP PHASE1:Mm9::chr11:35702613..35702620,+#_73ac917f6cba2ef77479474434ea5f5fp@chr11:35702613..35702620, +
5.75e-23FFCP PHASE2:Mm9::chr11:35702613..35702620,+#_73ac917f6cba2ef77479474434ea5f5fp@chr11:35702613..35702620, +
8.04e-23FFCP PHASE1:Hg19::chr8:41655463..41655504,-#_cbd151fa2377725afbb2d953d798169ap14@ANK1
8.04e-23FFCP PHASE2:Hg19::chr8:41655463..41655504,-#_cbd151fa2377725afbb2d953d798169ap14@ANK1
9.5e-23FFCP PHASE2:Mm9::chr16:15966748..15966763,-#_9ae5186390db554ba31ca86edbc24183p@chr16:15966748..15966763, -
9.5e-23FFCP PHASE2:Mm9::chr14:121638960..121638970,+#_9ae5186390db554ba31ca86edbc24183p@chr14:121638960..121638970, +
9.5e-23FFCP PHASE1:Mm9::chr16:15966748..15966763,-#_9ae5186390db554ba31ca86edbc24183p@chr16:15966748..15966763, -
9.5e-23FFCP PHASE1:Mm9::chr14:121638960..121638970,+#_9ae5186390db554ba31ca86edbc24183p@chr14:121638960..121638970, +
2.84e-22FFCP PHASE1:Hg19::chr14:73360967..73360973,+#_4c2de93d3b70788e54f5f867f2d52fe5p@chr14:73360967..73360973, +
2.84e-22FFCP PHASE2:Hg19::chr14:73360967..73360973,+#_4c2de93d3b70788e54f5f867f2d52fe5p@chr14:73360967..73360973, +
4.06e-22FFCP PHASE1:Hg19::chr3:147127489..147127503,+#_9b7fbbe7c3cdead1ba819858e23dd617p11@ZIC1
4.06e-22FFCP PHASE2:Hg19::chr3:147127489..147127503,+#_9b7fbbe7c3cdead1ba819858e23dd617p11@ZIC1
1.76e-21FFCP PHASE1:Hg19::chr6:45296191..45296203,+#_b529c258b49db582197dcb10d9e77d87p13@RUNX2
1.76e-21FFCP PHASE2:Hg19::chr6:45296191..45296203,+#_b529c258b49db582197dcb10d9e77d87p13@RUNX2
2.17e-21FFCP PHASE2:Hg19::chr11:2973356..2973367,-#_6492eaf94cbf0eff615bb3497c0da3dbp11@NAP1L4
2.17e-21FFCP PHASE1:Hg19::chr11:2973356..2973367,-#_6492eaf94cbf0eff615bb3497c0da3dbp11@NAP1L4
4.46e-21FFCP PHASE1:Hg19::chr2:48919725..48919761,+#_5001d31a01fe507ff809bd9efb66e2d3p@chr2:48919725..48919761, +
4.46e-21FFCP PHASE2:Hg19::chr2:48919725..48919761,+#_5001d31a01fe507ff809bd9efb66e2d3p@chr2:48919725..48919761, +

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