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{{UBERON
{{UBERON
|id=UBERON:0009617
|alt_id=
|name=head paraxial mesoderm
|namespace=
|def="Bilateral mesenchymal mesoderm parallel and immediately adjacent to the neural tube/notochord; it generates a subset of extra-ocular, and other head, muscles." [PMID:21610022]
|xref=EHDAA2:0000736;;EHDAA:364;;EMAPA:16171
|is_a=UBERON:0003104;;UBERON:0004120;;UBERON:0005291
|synonym="cephalic paraxial mesoderm" EXACT [UBERON:cjm];;"head paraxial mesenchyme" EXACT [EHDAA2:0000736]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="Bilateral mesenchymal mesoderm parallel and immediately adjacent to the neural tube/notochord; it generates a subset of extra-ocular, and other head, muscles." [PMID:21610022]
|subset=
|derives_from=
|derives_from=
|develops_from=UBERON:0000926
|develops_from=UBERON:0000926
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0009617
|is_a=UBERON:0006904
|is_obsolete=
|located_in=
|located_in=
|name=head paraxial mesoderm
|namespace=
|obo_creation_date=
|part_of=UBERON:0003077;;UBERON:0005253
|part_of=UBERON:0003077;;UBERON:0005253
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="cephalic paraxial mesoderm" EXACT [UBERON:cjm];;"head paraxial mesenchyme" EXACT [EHDAA2:0000736]
|union_of=
|xref=EHDAA2:0000736;;EHDAA:364;;EMAPA:16171
}}
}}

Revision as of 11:47, 12 September 2014

Name:head paraxial mesoderm
Definition:"Bilateral mesenchymal mesoderm parallel and immediately adjacent to the neural tube/notochord; it generates a subset of extra-ocular, and other head, muscles." [PMID:21610022]
Xrefs:
links:

EHDAA2:0000736
EHDAA:364

EMAPA:16171
Synonyms: "cephalic paraxial mesoderm" EXACT [UBERON:cjm]
"head paraxial mesenchyme" EXACT [EHDAA2:0000736]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0006904(head mesenchyme from mesoderm)
develops_from:UBERON:0000926(mesoderm)
part_of:UBERON:0003077(paraxial mesoderm),UBERON:0005253(head mesenchyme)



Children

develops from:UBERON:0004761 (cartilaginous neurocranium),UBERON:0007647 (ectomeninx)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0009617 (head paraxial mesoderm), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.87e-86FFCP PHASE2:Mm9::chr4:133802857..133802884,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr4:133802857..133802884, +
1.87e-86FFCP PHASE1:Mm9::chr16:96494788..96494801,+#_c6d67655ae3e8e9acffeefba96516e6ap12@B3galt5
1.87e-86FFCP PHASE2:Mm9::chr13:78322383..78322395,-#_c6d67655ae3e8e9acffeefba96516e6ap2@uc007rhb.1
1.87e-86FFCP PHASE2:Mm9::chr1:182528388..182528403,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr1:182528388..182528403, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207998..42208009,-#_c6d67655ae3e8e9acffeefba96516e6ap6@Tecta
1.87e-86FFCP PHASE1:Mm9::chr1:94627290..94627299,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr1:94627290..94627299, -
1.87e-86FFCP PHASE2:Mm9::chr5:30710416..30710440,-#_c6d67655ae3e8e9acffeefba96516e6ap2@Otof
1.87e-86FFCP PHASE2:Mm9::chr13:37195838..37195870,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr13:37195838..37195870, -
1.87e-86FFCP PHASE2:Mm9::chr15:103146966..103146971,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr15:103146966..103146971, -
1.87e-86FFCP PHASE1:Mm9::chr9:92087926..92087938,+#_c6d67655ae3e8e9acffeefba96516e6ap2@Plscr5
1.87e-86FFCP PHASE1:Mm9::chr1:172843847..172843880,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr1:172843847..172843880, -
1.87e-86FFCP PHASE2:Mm9::chr15:65641779..65641790,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr15:65641779..65641790, +
1.87e-86FFCP PHASE2:Mm9::chr12:109905468..109905474,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr12:109905468..109905474, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207397..42207408,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr9:42207397..42207408, -
1.87e-86FFCP PHASE1:Mm9::chr1:78523144..78523177,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr1:78523144..78523177, +
1.87e-86FFCP PHASE2:Mm9::chr16:93971367..93971379,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr16:93971367..93971379, -
1.87e-86FFCP PHASE2:Mm9::chr10:107156949..107156956,-#_c6d67655ae3e8e9acffeefba96516e6ap3@Ptprq
1.87e-86FFCP PHASE1:Mm9::chr3:154459246..154459253,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr3:154459246..154459253, +
1.87e-86FFCP PHASE2:Mm9::chr8:13425469..13425503,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr8:13425469..13425503, +
1.87e-86FFCP PHASE2:Mm9::chr6:29428397..29428407,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr6:29428397..29428407, -
1.87e-86FFCP PHASE2:Mm9::chr4:115556939..115556945,+#_c6d67655ae3e8e9acffeefba96516e6ap4@Kncn
1.87e-86FFCP PHASE2:Mm9::chr17:13983095..13983100,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr17:13983095..13983100, +
1.87e-86FFCP PHASE1:Mm9::chr11:89702580..89702593,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr11:89702580..89702593, -
1.87e-86FFCP PHASE1:Mm9::chr2:53464168..53464175,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr2:53464168..53464175, +
1.87e-86FFCP PHASE2:Mm9::chr18:66033526..66033539,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr18:66033526..66033539, -
1.87e-86FFCP PHASE2:Mm9::chr15:89215333..89215341,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr15:89215333..89215341, +
1.87e-86FFCP PHASE2:Mm9::chr14:31283085..31283097,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr14:31283085..31283097, -
1.87e-86FFCP PHASE1:Mm9::chr6:29428397..29428407,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr6:29428397..29428407, -
1.87e-86FFCP PHASE1:Mm9::chr10:97109753..97109764,+#_c6d67655ae3e8e9acffeefba96516e6ap3@Epyc
1.87e-86FFCP PHASE2:Mm9::chr7:29733825..29733837,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr7:29733825..29733837, -
1.87e-86FFCP PHASE1:Mm9::chr2:121206695..121206711,-#_c6d67655ae3e8e9acffeefba96516e6ap1@Strc
1.87e-86FFCP PHASE1:Mm9::chr15:58022966..58022995,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr15:58022966..58022995, -
1.87e-86FFCP PHASE2:Mm9::chr19:22767090..22767099,+#_c6d67655ae3e8e9acffeefba96516e6ap18@Trpm3
1.87e-86FFCP PHASE2:Mm9::chr18:81314626..81314636,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr18:81314626..81314636, +
1.87e-86FFCP PHASE2:Mm9::chr2:75320183..75320189,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr2:75320183..75320189, +
1.87e-86FFCP PHASE2:Mm9::chr2:121206695..121206711,-#_c6d67655ae3e8e9acffeefba96516e6ap1@Strc
1.87e-86FFCP PHASE1:Mm9::chr5:147854240..147854249,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr5:147854240..147854249, -
1.87e-86FFCP PHASE1:Mm9::chr18:42158627..42158630,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr18:42158627..42158630, -
1.87e-86FFCP PHASE2:Mm9::chr19:10536767..10536777,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr19:10536767..10536777, -
1.87e-86FFCP PHASE2:Mm9::chr2:170417150..170417155,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr2:170417150..170417155, -
1.87e-86FFCP PHASE1:Mm9::chr14:31283072..31283081,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr14:31283072..31283081, -
1.87e-86FFCP PHASE2:Mm9::chr9:42207998..42208009,-#_c6d67655ae3e8e9acffeefba96516e6ap6@Tecta
1.87e-86FFCP PHASE1:Mm9::chr6:113251606..113251613,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr6:113251606..113251613, +
1.87e-86FFCP PHASE1:Mm9::chr4:130461150..130461185,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr4:130461150..130461185, +
1.87e-86FFCP PHASE1:Mm9::chr17:13983095..13983100,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr17:13983095..13983100, +
1.87e-86FFCP PHASE1:Mm9::chr13:43699228..43699239,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr13:43699228..43699239, +
1.87e-86FFCP PHASE2:Mm9::chr16:96494788..96494801,+#_c6d67655ae3e8e9acffeefba96516e6ap12@B3galt5
1.87e-86FFCP PHASE1:Mm9::chr19:55255289..55255299,+#_c6d67655ae3e8e9acffeefba96516e6ap2@Tectb
1.87e-86FFCP PHASE2:Mm9::chr12:13508015..13508019,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr12:13508015..13508019, +
1.87e-86FFCP PHASE2:Mm9::chr16:45693840..45693856,-#_c6d67655ae3e8e9acffeefba96516e6ap1@Tmprss7
1.87e-86FFCP PHASE1:Mm9::chr15:97806034..97806061,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr15:97806034..97806061, +
1.87e-86FFCP PHASE1:Mm9::chr10:80806047..80806059,-#_c6d67655ae3e8e9acffeefba96516e6ap4@Gipc3
1.87e-86FFCP PHASE2:Mm9::chr13:78257454..78257465,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr13:78257454..78257465, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207852..42207876,-#_c6d67655ae3e8e9acffeefba96516e6ap2@Tecta
1.87e-86FFCP PHASE1:Mm9::chr7:29733825..29733837,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr7:29733825..29733837, -
1.87e-86FFCP PHASE1:Mm9::chr1:93235228..93235249,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr1:93235228..93235249, +
1.87e-86FFCP PHASE2:Mm9::chrX:154140781..154140788,+#_c6d67655ae3e8e9acffeefba96516e6ap@chrX:154140781..154140788, +
1.87e-86FFCP PHASE2:Mm9::chr3:69811606..69811616,+#_c6d67655ae3e8e9acffeefba96516e6ap2@Otol1
1.87e-86FFCP PHASE2:Mm9::chr10:107349392..107349413,-#_c6d67655ae3e8e9acffeefba96516e6ap2@Otogl
1.87e-86FFCP PHASE1:Mm9::chr15:85334335..85334353,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr15:85334335..85334353, +
1.87e-86FFCP PHASE2:Mm9::chr1:93218682..93218691,+#_c6d67655ae3e8e9acffeefba96516e6ap2@Espnl
1.87e-86FFCP PHASE2:Mm9::chr4:154208086..154208123,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr4:154208086..154208123, +
1.87e-86FFCP PHASE1:Mm9::chr12:109905399..109905416,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr12:109905399..109905416, +
1.87e-86FFCP PHASE2:Mm9::chr13:43699228..43699239,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr13:43699228..43699239, +
1.87e-86FFCP PHASE2:Mm9::chr15:85334335..85334353,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr15:85334335..85334353, +
1.87e-86FFCP PHASE2:Mm9::chr9:42207397..42207408,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr9:42207397..42207408, -
1.87e-86FFCP PHASE2:Mm9::chr6:113251614..113251623,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr6:113251614..113251623, +
1.87e-86FFCP PHASE2:Mm9::chr3:154459246..154459253,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr3:154459246..154459253, +
1.87e-86FFCP PHASE1:Mm9::chr9:42206730..42206739,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr9:42206730..42206739, -
1.87e-86FFCP PHASE1:Mm9::chr1:63733478..63733491,-#_c6d67655ae3e8e9acffeefba96516e6ap1@Dytn
1.87e-86FFCP PHASE2:Mm9::chr1:63733478..63733491,-#_c6d67655ae3e8e9acffeefba96516e6ap1@Dytn
1.87e-86FFCP PHASE1:Mm9::chr13:78322370..78322376,-#_c6d67655ae3e8e9acffeefba96516e6ap4@uc007rhb.1
1.87e-86FFCP PHASE1:Mm9::chr7:109052262..109052291,-#_c6d67655ae3e8e9acffeefba96516e6ap1@Tomt
1.87e-86FFCP PHASE1:Mm9::chr2:152453066..152453075,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr2:152453066..152453075, -
1.87e-86FFCP PHASE2:Mm9::chr18:38104702..38104718,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr18:38104702..38104718, -
1.87e-86FFCP PHASE2:Mm9::chr9:41495920..41495928,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr9:41495920..41495928, -
1.87e-86FFCP PHASE1:Mm9::chr5:28035962..28035983,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr5:28035962..28035983, +
1.87e-86FFCP PHASE1:Mm9::chr4:101908153..101908163,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr4:101908153..101908163, +
1.87e-86FFCP PHASE1:Mm9::chr2:29935952..29935993,+#_c6d67655ae3e8e9acffeefba96516e6ap7@Pkn3
1.87e-86FFCP PHASE1:Mm9::chr3:106986057..106986062,+#_c6d67655ae3e8e9acffeefba96516e6ap1@Kcna10
1.87e-86FFCP PHASE1:Mm9::chr13:58283583..58283607,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr13:58283583..58283607, -
1.87e-86FFCP PHASE1:Mm9::chr6:86746562..86746579,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr6:86746562..86746579, -
1.87e-86FFCP PHASE1:Mm9::chr10:107349430..107349440,-#_c6d67655ae3e8e9acffeefba96516e6ap3@Otogl
1.87e-86FFCP PHASE2:Mm9::chr10:80806020..80806031,-#_c6d67655ae3e8e9acffeefba96516e6ap3@Gipc3
1.87e-86FFCP PHASE1:Mm9::chrX:154140781..154140788,+#_c6d67655ae3e8e9acffeefba96516e6ap@chrX:154140781..154140788, +
1.87e-86FFCP PHASE1:Mm9::chr3:69811606..69811616,+#_c6d67655ae3e8e9acffeefba96516e6ap2@Otol1
1.87e-86FFCP PHASE2:Mm9::chr6:86745686..86745727,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr6:86745686..86745727, -
1.87e-86FFCP PHASE2:Mm9::chr10:67371994..67372010,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr10:67371994..67372010, +
1.87e-86FFCP PHASE2:Mm9::chr9:42207852..42207876,-#_c6d67655ae3e8e9acffeefba96516e6ap2@Tecta
1.87e-86FFCP PHASE1:Mm9::chr9:42208023..42208043,-#_c6d67655ae3e8e9acffeefba96516e6ap4@Tecta
1.87e-86FFCP PHASE2:Mm9::chr3:31585340..31585360,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr3:31585340..31585360, +
1.87e-86FFCP PHASE2:Mm9::chr1:172843796..172843799,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr1:172843796..172843799, -
1.87e-86FFCP PHASE2:Mm9::chr5:30710455..30710464,-#_c6d67655ae3e8e9acffeefba96516e6ap9@Otof
1.87e-86FFCP PHASE1:Mm9::chr11:120222470..120222516,+#_c6d67655ae3e8e9acffeefba96516e6ap2@Fscn2
1.87e-86FFCP PHASE2:Mm9::chr15:97806034..97806061,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr15:97806034..97806061, +
1.87e-86FFCP PHASE2:Mm9::chr14:20649897..20649907,+#_c6d67655ae3e8e9acffeefba96516e6ap@chr14:20649897..20649907, +
1.87e-86FFCP PHASE2:Mm9::chr10:108316802..108316807,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr10:108316802..108316807, -
1.87e-86FFCP PHASE2:Mm9::chr9:50968647..50968668,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr9:50968647..50968668, -
1.87e-86FFCP PHASE2:Mm9::chr14:63099970..63099980,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr14:63099970..63099980, -
1.87e-86FFCP PHASE1:Mm9::chr1:172843885..172843890,-#_c6d67655ae3e8e9acffeefba96516e6ap@chr1:172843885..172843890, -

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