FFCP PHASE1:Hg19::chr1:44381095..44381120,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0002159!1.95e-33!13;CL:0002076!2.67e-29!43;CL:0002368!1.83e-26!13;CL:0000223!1.27e-22!59;CL:0002077!1.71e-17!33;CL:0000066!3.23e-16!254;CL:0002328!1.17e-14!3;CL:0000362!2.16e-14!8;CL:0002621!5.14e-14!3;CL:0002166!8.36e-14!3;CL:0000220!2.98e-13!246;CL:0002321!4.37e-13!248;CL:0002202!6.75e-13!9;CL:0002632!6.75e-13!9;CL:0000240!1.92e-12!6;CL:0000311!1.92e-12!6;CL:0000079!1.92e-12!6;CL:0000237!1.92e-12!6;CL:0000036!1.92e-12!6;CL:0000357!1.92e-12!6;CL:0000114!1.92e-12!6;CL:0000575!1.46e-10!2;CL:0000221!1.90e-10!71;CL:0002327!1.97e-10!4;CL:0000317!5.26e-10!2;CL:1000448!5.26e-10!2;CL:0002308!5.26e-10!2;CL:0002140!5.26e-10!2;CL:0000076!1.38e-09!62;CL:0002251!1.74e-09!21;CL:0000312!3.92e-09!5;CL:0000068!2.75e-07!3;CL:0000069!2.75e-07!3;CL:0000307!2.75e-07!3;CL:0000377!2.75e-07!3;CL:0002231!8.80e-07!3 | |ontology_enrichment_celltype=CL:0002159!1.95e-33!13;CL:0002076!2.67e-29!43;CL:0002368!1.83e-26!13;CL:0000223!1.27e-22!59;CL:0002077!1.71e-17!33;CL:0000066!3.23e-16!254;CL:0002328!1.17e-14!3;CL:0000362!2.16e-14!8;CL:0002621!5.14e-14!3;CL:0002166!8.36e-14!3;CL:0000220!2.98e-13!246;CL:0002321!4.37e-13!248;CL:0002202!6.75e-13!9;CL:0002632!6.75e-13!9;CL:0000240!1.92e-12!6;CL:0000311!1.92e-12!6;CL:0000079!1.92e-12!6;CL:0000237!1.92e-12!6;CL:0000036!1.92e-12!6;CL:0000357!1.92e-12!6;CL:0000114!1.92e-12!6;CL:0000575!1.46e-10!2;CL:0000221!1.90e-10!71;CL:0002327!1.97e-10!4;CL:0000317!5.26e-10!2;CL:1000448!5.26e-10!2;CL:0002308!5.26e-10!2;CL:0002140!5.26e-10!2;CL:0000076!1.38e-09!62;CL:0002251!1.74e-09!21;CL:0000312!3.92e-09!5;CL:0000068!2.75e-07!3;CL:0000069!2.75e-07!3;CL:0000307!2.75e-07!3;CL:0000377!2.75e-07!3;CL:0002231!8.80e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002159;4.86e-38;14!CL:0000575;2.10e-23;2!CL:0002077;3.06e-21;34!CL:0000312;8.35e-21;5!CL:0002202;3.45e-20;9!CL:0002632;3.45e-20;9!CL:0000362;5.24e-20;9!CL:0000240;1.90e-17;6!CL:0000311;1.90e-17;6!CL:0000079;1.90e-17;6!CL:0000237;1.90e-17;6!CL:0002328;6.03e-16;3!CL:0000307;6.26e-16;3!CL:0002368;4.57e-14;13!CL:0002076;5.24e-10;42!CL:0000197;2.56e-08;6!CL:0000098;2.56e-08;6!CL:0002167;2.56e-08;6 | |ontology_enrichment_celltype_v019=CL:0002159;4.86e-38;14!CL:0000575;2.10e-23;2!CL:0002077;3.06e-21;34!CL:0000312;8.35e-21;5!CL:0002202;3.45e-20;9!CL:0002632;3.45e-20;9!CL:0000362;5.24e-20;9!CL:0000240;1.90e-17;6!CL:0000311;1.90e-17;6!CL:0000079;1.90e-17;6!CL:0000237;1.90e-17;6!CL:0002328;6.03e-16;3!CL:0000307;6.26e-16;3!CL:0002368;4.57e-14;13!CL:0002076;5.24e-10;42!CL:0000197;2.56e-08;6!CL:0000098;2.56e-08;6!CL:0002167;2.56e-08;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002159,4.73e-38,14;CL:0002077,3.25e-25,34;CL:0000575,1.78e-23,2;CL:0000312,8.35e-21,5;CL:0002202,3.37e-20,9;CL:0002632,3.37e-20,9;CL:0000362,4.99e-20,9;CL:0000240,1.90e-17,6;CL:0000311,1.90e-17,6;CL:0000079,1.90e-17,6;CL:0000237,1.90e-17,6;CL:0000036,1.90e-17,6;CL:0000357,1.90e-17,6;CL:0000114,1.90e-17,6;CL:0000068,5.80e-16,3;CL:0000069,5.80e-16,3;CL:0000307,5.80e-16,3;CL:0000377,5.80e-16,3;CL:0002328,6.26e-16,3;CL:0002368,4.50e-14,13;CL:0000076,3.17e-13,63;CL:0002076,2.42e-12,42;CL:0000066,5.57e-12,253;CL:0000221,5.28e-11,72;CL:0002321,4.24e-09,250;CL:0000223,9.29e-09,58;CL:0000197,2.71e-08,6;CL:0000098,2.71e-08,6;CL:0002167,2.71e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000357;1.90e-17;6!CL:0000114;1.90e-17;6!CL:0000377;6.26e-16;3 | |ontology_enrichment_development_v019=CL:0000357;1.90e-17;6!CL:0000114;1.90e-17;6!CL:0000377;6.26e-16;3 | ||
|ontology_enrichment_disease=DOID:1749!7.09e-08!14 | |ontology_enrichment_disease=DOID:1749!7.09e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;9.79e-08;14 | |ontology_enrichment_disease_v019=DOID:1749;9.79e-08;14 | ||
|ontology_enrichment_disease_v019_2=DOID:1749,9.46e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0004815!1.17e-14!3;UBERON:0002031!1.17e-14!3;UBERON:0001949!5.14e-14!3;UBERON:0002185!4.14e-11!4;UBERON:0001708!1.79e-10!4;UBERON:0001704!1.79e-10!4;UBERON:0001911!1.97e-10!4;UBERON:0005333!1.97e-10!4;UBERON:0008425!1.97e-10!4;UBERON:0005311!1.97e-10!4;UBERON:0002419!5.26e-10!2;UBERON:0007771!5.26e-10!2;UBERON:0003297!5.26e-10!2;UBERON:0001821!5.26e-10!2;UBERON:0003487!5.26e-10!2;UBERON:0001820!5.26e-10!2;UBERON:0005089!5.26e-10!2;UBERON:0005088!5.26e-10!2;UBERON:0001004!4.04e-09!72;UBERON:0003729!1.40e-08!5;UBERON:0005157!2.05e-08!51;UBERON:0007196!3.61e-08!14;UBERON:0001558!3.61e-08!14;UBERON:0001003!4.39e-08!14;UBERON:0007376!4.39e-08!14;UBERON:0007383!4.39e-08!14;UBERON:0003102!2.33e-07!95;UBERON:0002090!4.00e-07!6 | |ontology_enrichment_uberon=UBERON:0004815!1.17e-14!3;UBERON:0002031!1.17e-14!3;UBERON:0001949!5.14e-14!3;UBERON:0002185!4.14e-11!4;UBERON:0001708!1.79e-10!4;UBERON:0001704!1.79e-10!4;UBERON:0001911!1.97e-10!4;UBERON:0005333!1.97e-10!4;UBERON:0008425!1.97e-10!4;UBERON:0005311!1.97e-10!4;UBERON:0002419!5.26e-10!2;UBERON:0007771!5.26e-10!2;UBERON:0003297!5.26e-10!2;UBERON:0001821!5.26e-10!2;UBERON:0003487!5.26e-10!2;UBERON:0001820!5.26e-10!2;UBERON:0005089!5.26e-10!2;UBERON:0005088!5.26e-10!2;UBERON:0001004!4.04e-09!72;UBERON:0003729!1.40e-08!5;UBERON:0005157!2.05e-08!51;UBERON:0007196!3.61e-08!14;UBERON:0001558!3.61e-08!14;UBERON:0001003!4.39e-08!14;UBERON:0007376!4.39e-08!14;UBERON:0007383!4.39e-08!14;UBERON:0003102!2.33e-07!95;UBERON:0002090!4.00e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0004815;6.03e-16;3!UBERON:0002031;6.03e-16;3!UBERON:0000997;1.66e-12;1!UBERON:0005056;1.66e-12;1!UBERON:0004176;1.66e-12;1!UBERON:0007196;3.18e-12;15!UBERON:0001558;3.18e-12;15!UBERON:0000964;3.36e-12;4!UBERON:0010409;3.36e-12;4!UBERON:0001003;4.08e-12;15!UBERON:0007376;4.08e-12;15!UBERON:0002185;6.09e-10;5!UBERON:0010371;7.83e-09;31!UBERON:0000485;2.41e-07;7!UBERON:0003126;2.44e-07;7!UBERON:0001005;2.44e-07;7 | |ontology_enrichment_uberon_v019=UBERON:0004815;6.03e-16;3!UBERON:0002031;6.03e-16;3!UBERON:0000997;1.66e-12;1!UBERON:0005056;1.66e-12;1!UBERON:0004176;1.66e-12;1!UBERON:0007196;3.18e-12;15!UBERON:0001558;3.18e-12;15!UBERON:0000964;3.36e-12;4!UBERON:0010409;3.36e-12;4!UBERON:0001003;4.08e-12;15!UBERON:0007376;4.08e-12;15!UBERON:0002185;6.09e-10;5!UBERON:0010371;7.83e-09;31!UBERON:0000485;2.41e-07;7!UBERON:0003126;2.44e-07;7!UBERON:0001005;2.44e-07;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,6.26e-16,3;UBERON:0002031,6.26e-16,3;UBERON:0000997,1.75e-12,1;UBERON:0005056,1.75e-12,1;UBERON:0000964,3.09e-12,4;UBERON:0010409,3.09e-12,4;UBERON:0004348,3.09e-12,4;UBERON:0005427,3.09e-12,4;UBERON:0007196,3.14e-12,15;UBERON:0001558,3.14e-12,15;UBERON:0001003,3.96e-12,15;UBERON:0007376,3.96e-12,15;UBERON:0007383,3.96e-12,15;UBERON:0002185,6.22e-10,5;UBERON:0003102,7.67e-10,99;UBERON:0003126,2.37e-07,7;UBERON:0001005,2.37e-07,7 | |||
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|short_description=p@chr1:44381095..44381120,+ | |short_description=p@chr1:44381095..44381120,+ | ||
}} | }} |
Revision as of 13:07, 19 November 2012
Short description: | p@chr1:44381095..44381120, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:44381095..44381120, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 4.73e-38 | 14 |
ecto-epithelial cell | 3.25e-25 | 34 |
corneal epithelial cell | 1.78e-23 | 2 |
keratinocyte | 8.35e-21 | 5 |
epithelial cell of tracheobronchial tree | 3.37e-20 | 9 |
epithelial cell of lower respiratory tract | 3.37e-20 | 9 |
epidermal cell | 4.99e-20 | 9 |
stratified squamous epithelial cell | 1.90e-17 | 6 |
keratin accumulating cell | 1.90e-17 | 6 |
stratified epithelial cell | 1.90e-17 | 6 |
keratinizing barrier epithelial cell | 1.90e-17 | 6 |
epithelial fate stem cell | 1.90e-17 | 6 |
stratified epithelial stem cell | 1.90e-17 | 6 |
surface ectodermal cell | 1.90e-17 | 6 |
duct epithelial cell | 5.80e-16 | 3 |
branched duct epithelial cell | 5.80e-16 | 3 |
tracheal epithelial cell | 5.80e-16 | 3 |
tracheoblast | 5.80e-16 | 3 |
bronchial epithelial cell | 6.26e-16 | 3 |
respiratory epithelial cell | 4.50e-14 | 13 |
squamous epithelial cell | 3.17e-13 | 63 |
endo-epithelial cell | 2.42e-12 | 42 |
epithelial cell | 5.57e-12 | 253 |
ectodermal cell | 5.28e-11 | 72 |
embryonic cell | 4.24e-09 | 250 |
endodermal cell | 9.29e-09 | 58 |
receptor cell | 2.71e-08 | 6 |
sensory epithelial cell | 2.71e-08 | 6 |
olfactory epithelial cell | 2.71e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 6.26e-16 | 3 |
epithelium of bronchus | 6.26e-16 | 3 |
mammalian vulva | 1.75e-12 | 1 |
external female genitalia | 1.75e-12 | 1 |
cornea | 3.09e-12 | 4 |
eye surface | 3.09e-12 | 4 |
optic eminence | 3.09e-12 | 4 |
corneal primordium | 3.09e-12 | 4 |
tracheobronchial tree | 3.14e-12 | 15 |
lower respiratory tract | 3.14e-12 | 15 |
skin epidermis | 3.96e-12 | 15 |
outer epithelium | 3.96e-12 | 15 |
enveloping layer of ectoderm | 3.96e-12 | 15 |
bronchus | 6.22e-10 | 5 |
surface structure | 7.67e-10 | 99 |
trachea | 2.37e-07 | 7 |
respiratory airway | 2.37e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 9.46e-08 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.