FFCP PHASE1:Hg19::chr8:55528684..55528695,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000306!2.61e-08!4;CL:0002222!2.61e-08!4;CL:0002224!2.61e-08!4;CL:0000453!6.04e-07!5 | |ontology_enrichment_celltype=CL:0000306!2.61e-08!4;CL:0002222!2.61e-08!4;CL:0002224!2.61e-08!4;CL:0000453!6.04e-07!5 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;5.96e-34;3 | |ontology_enrichment_development_v019=UBERON:0003056;5.96e-34;3 | ||
|ontology_enrichment_disease=DOID:5409!2.11e-08!4 | |ontology_enrichment_disease=DOID:5409!2.11e-08!4 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000966!1.02e-23!5;UBERON:0005388!1.02e-23!5;UBERON:0001802!1.02e-23!5;UBERON:0000970!3.74e-23!20;UBERON:0002104!4.41e-22!21;UBERON:0000020!3.23e-20!23;UBERON:0001032!2.12e-19!24;UBERON:0004456!2.12e-19!24;UBERON:0000019!3.96e-14!19;UBERON:0000047!3.96e-14!19;UBERON:0004088!3.96e-14!19;UBERON:0003072!3.96e-14!19;UBERON:0003071!3.96e-14!19;UBERON:0004128!3.96e-14!19;UBERON:0001456!7.43e-13!21;UBERON:0005085!1.66e-09!29;UBERON:0010077!2.61e-08!4;UBERON:0005389!2.61e-08!4;UBERON:0000484!2.61e-08!4;UBERON:0002546!2.61e-08!4;UBERON:0000965!2.61e-08!4;UBERON:0001803!2.61e-08!4;UBERON:0003073!2.61e-08!4;UBERON:0005426!2.61e-08!4 | |ontology_enrichment_uberon=UBERON:0000966!1.02e-23!5;UBERON:0005388!1.02e-23!5;UBERON:0001802!1.02e-23!5;UBERON:0000970!3.74e-23!20;UBERON:0002104!4.41e-22!21;UBERON:0000020!3.23e-20!23;UBERON:0001032!2.12e-19!24;UBERON:0004456!2.12e-19!24;UBERON:0000019!3.96e-14!19;UBERON:0000047!3.96e-14!19;UBERON:0004088!3.96e-14!19;UBERON:0003072!3.96e-14!19;UBERON:0003071!3.96e-14!19;UBERON:0004128!3.96e-14!19;UBERON:0001456!7.43e-13!21;UBERON:0005085!1.66e-09!29;UBERON:0010077!2.61e-08!4;UBERON:0005389!2.61e-08!4;UBERON:0000484!2.61e-08!4;UBERON:0002546!2.61e-08!4;UBERON:0000965!2.61e-08!4;UBERON:0001803!2.61e-08!4;UBERON:0003073!2.61e-08!4;UBERON:0005426!2.61e-08!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0000966;5.15e-21;5!UBERON:0005388;5.15e-21;5!UBERON:0001802;5.15e-21;5!UBERON:0000970;5.71e-21;20!UBERON:0002104;4.86e-20;21!UBERON:0000020;2.02e-18;23!UBERON:0001032;1.03e-17;24!UBERON:0004456;1.03e-17;24 | |ontology_enrichment_uberon_v019=UBERON:0000966;5.15e-21;5!UBERON:0005388;5.15e-21;5!UBERON:0001802;5.15e-21;5!UBERON:0000970;5.71e-21;20!UBERON:0002104;4.86e-20;21!UBERON:0000020;2.02e-18;23!UBERON:0001032;1.03e-17;24!UBERON:0004456;1.03e-17;24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,4.86e-20,21;UBERON:0002104,4.86e-20,21;UBERON:0000966,9.07e-18,6;UBERON:0005388,9.07e-18,6;UBERON:0001802,9.07e-18,6;UBERON:0000020,1.03e-17,24;UBERON:0001032,1.03e-17,24;UBERON:0004456,1.03e-17,24 | |||
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|short_description=p9@RP1 | |short_description=p9@RP1 | ||
}} | }} |
Revision as of 15:16, 19 November 2012
Short description: | p9@RP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_RP1_5end |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | 57bp_to_ENST00000220676, NM_006269, uc003xsd.1_5end |
EntrezGene: | RP1 |
HGNC: | 10263 |
UniProt: | P56715 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 4.86e-20 | 21 |
visual system | 4.86e-20 | 21 |
retina | 9.07e-18 | 6 |
photoreceptor array | 9.07e-18 | 6 |
posterior segment of eyeball | 9.07e-18 | 6 |
sense organ | 1.03e-17 | 24 |
sensory system | 1.03e-17 | 24 |
entire sense organ system | 1.03e-17 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.