FFCP PHASE1:Hg19::chr14:60194070..60194083,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0002568!6.97e-12!1 | |ontology_enrichment_celltype=CL:0002568!6.97e-12!1 | ||
|ontology_enrichment_celltype_v019=CL:0000082;6.95e-12;19 | |ontology_enrichment_celltype_v019=CL:0000082;6.95e-12;19 | ||
|ontology_enrichment_celltype_v019_2=CL:0000082,6.95e-12,19 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.67e-08;29!UBERON:0001041;4.53e-08;30 | |ontology_enrichment_development_v019=UBERON:0008947;2.67e-08;29!UBERON:0001041;4.53e-08;30 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5409;3.10e-50;4!DOID:1325;1.78e-29;7!DOID:3904;1.78e-29;7!DOID:3905;2.62e-23;9!DOID:1324;1.22e-14;15!DOID:0050615;8.02e-14;16 | |ontology_enrichment_disease_v019=DOID:5409;3.10e-50;4!DOID:1325;1.78e-29;7!DOID:3904;1.78e-29;7!DOID:3905;2.62e-23;9!DOID:1324;1.22e-14;15!DOID:0050615;8.02e-14;16 | ||
|ontology_enrichment_disease_v019_2=DOID:5409,3.10e-50,4;DOID:1325,1.78e-29,7;DOID:3904,1.78e-29,7;DOID:3905,2.62e-23,9;DOID:1324,1.22e-14,15;DOID:0050615,8.02e-14,16 | |||
|ontology_enrichment_uberon=UBERON:0002106!1.07e-14!3;UBERON:0004854!1.07e-14!3;UBERON:0009034!1.07e-14!3;UBERON:0002095!1.07e-14!3;UBERON:0004782!1.07e-14!3;UBERON:0003281!1.07e-14!3;UBERON:0009664!1.07e-14!3;UBERON:0002296!1.07e-14!3;UBERON:0005602!1.07e-14!3;UBERON:0001179!1.07e-14!3;UBERON:0006293!1.07e-14!3;UBERON:0007190!1.19e-11!1;UBERON:0002022!1.81e-11!1;UBERON:0001869!6.44e-11!32;UBERON:0002020!2.57e-10!34;UBERON:0003528!2.57e-10!34;UBERON:0001893!2.85e-10!34;UBERON:0001017!6.23e-09!82;UBERON:0002780!1.71e-08!41;UBERON:0001890!1.71e-08!41;UBERON:0006240!1.71e-08!41;UBERON:0005743!1.79e-08!86;UBERON:0003080!2.76e-08!42;UBERON:0001950!4.10e-08!20;UBERON:0001049!4.15e-08!57;UBERON:0005068!4.15e-08!57;UBERON:0006241!4.15e-08!57;UBERON:0007135!4.15e-08!57;UBERON:0002616!8.14e-08!59;UBERON:0000073!1.41e-07!94;UBERON:0001016!1.41e-07!94;UBERON:0002791!1.56e-07!33;UBERON:0002619!2.01e-07!22;UBERON:0004177!8.34e-07!7;UBERON:0003075!9.56e-07!86;UBERON:0007284!9.56e-07!86 | |ontology_enrichment_uberon=UBERON:0002106!1.07e-14!3;UBERON:0004854!1.07e-14!3;UBERON:0009034!1.07e-14!3;UBERON:0002095!1.07e-14!3;UBERON:0004782!1.07e-14!3;UBERON:0003281!1.07e-14!3;UBERON:0009664!1.07e-14!3;UBERON:0002296!1.07e-14!3;UBERON:0005602!1.07e-14!3;UBERON:0001179!1.07e-14!3;UBERON:0006293!1.07e-14!3;UBERON:0007190!1.19e-11!1;UBERON:0002022!1.81e-11!1;UBERON:0001869!6.44e-11!32;UBERON:0002020!2.57e-10!34;UBERON:0003528!2.57e-10!34;UBERON:0001893!2.85e-10!34;UBERON:0001017!6.23e-09!82;UBERON:0002780!1.71e-08!41;UBERON:0001890!1.71e-08!41;UBERON:0006240!1.71e-08!41;UBERON:0005743!1.79e-08!86;UBERON:0003080!2.76e-08!42;UBERON:0001950!4.10e-08!20;UBERON:0001049!4.15e-08!57;UBERON:0005068!4.15e-08!57;UBERON:0006241!4.15e-08!57;UBERON:0007135!4.15e-08!57;UBERON:0002616!8.14e-08!59;UBERON:0000073!1.41e-07!94;UBERON:0001016!1.41e-07!94;UBERON:0002791!1.56e-07!33;UBERON:0002619!2.01e-07!22;UBERON:0004177!8.34e-07!7;UBERON:0003075!9.56e-07!86;UBERON:0007284!9.56e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0004802;6.95e-12;19!UBERON:0000115;6.95e-12;19!UBERON:0002048;1.80e-10;22!UBERON:0004807;1.80e-10;22!UBERON:0000117;1.80e-10;22!UBERON:0000171;1.80e-10;22!UBERON:0000170;1.80e-10;22!UBERON:0005911;4.53e-08;36!UBERON:0005178;2.32e-07;34!UBERON:0000072;2.32e-07;37!UBERON:0005181;2.32e-07;35!UBERON:0002224;2.32e-07;34 | |ontology_enrichment_uberon_v019=UBERON:0004802;6.95e-12;19!UBERON:0000115;6.95e-12;19!UBERON:0002048;1.80e-10;22!UBERON:0004807;1.80e-10;22!UBERON:0000117;1.80e-10;22!UBERON:0000171;1.80e-10;22!UBERON:0000170;1.80e-10;22!UBERON:0005911;4.53e-08;36!UBERON:0005178;2.32e-07;34!UBERON:0000072;2.32e-07;37!UBERON:0005181;2.32e-07;35!UBERON:0002224;2.32e-07;34 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004802,6.95e-12,19;UBERON:0000115,6.95e-12,19;UBERON:0002048,1.80e-10,22;UBERON:0000117,1.80e-10,22;UBERON:0000171,1.80e-10,22;UBERON:0000170,1.80e-10,22;UBERON:0005597,1.80e-10,22;UBERON:0000118,1.80e-10,22;UBERON:0004807,1.52e-08,28;UBERON:0005178,2.74e-07,34;UBERON:0002224,2.74e-07,34;UBERON:0005181,4.03e-07,35;UBERON:0005153,8.21e-07,37 | |||
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|short_description=p25@RTN1 | |short_description=p25@RTN1 | ||
}} | }} |
Revision as of 05:53, 21 November 2012
Short description: | p25@RTN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_25_at_RTN1_5end |
Coexpression cluster: | C89_small_retinoblastoma_medulloblastoma_iPS_acantholytic_eye_bronchogenic |
Association with transcript: | 208bp_to_DQ355431_5end |
EntrezGene: | RTN1 |
HGNC: | 10467 |
UniProt: | Q2L7A7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of lung | 6.95e-12 | 19 |
Ontology term | p-value | n |
---|---|---|
respiratory tract epithelium | 6.95e-12 | 19 |
lung epithelium | 6.95e-12 | 19 |
lung | 1.80e-10 | 22 |
respiratory tube | 1.80e-10 | 22 |
respiration organ | 1.80e-10 | 22 |
pair of lungs | 1.80e-10 | 22 |
lung primordium | 1.80e-10 | 22 |
lung bud | 1.80e-10 | 22 |
respiratory system epithelium | 1.52e-08 | 28 |
thoracic cavity element | 2.74e-07 | 34 |
thoracic cavity | 2.74e-07 | 34 |
thoracic segment organ | 4.03e-07 | 35 |
epithelial bud | 8.21e-07 | 37 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 3.10e-50 | 4 |
bronchus cancer | 1.78e-29 | 7 |
bronchogenic carcinoma | 1.78e-29 | 7 |
lung carcinoma | 2.62e-23 | 9 |
lung cancer | 1.22e-14 | 15 |
respiratory system cancer | 8.02e-14 | 16 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.