FFCP PHASE1:Hg19::chr18:42260920..42260951,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000236!2.15e-08!14;CL:0000945!9.39e-08!24;CL:0000826!9.39e-08!24 | |ontology_enrichment_celltype=CL:0000236!2.15e-08!14;CL:0000945!9.39e-08!24;CL:0000826!9.39e-08!24 | ||
|ontology_enrichment_celltype_v019=CL:0000236;9.41e-15;13!CL:0000945;2.58e-14;24 | |ontology_enrichment_celltype_v019=CL:0000236;9.41e-15;13!CL:0000945;2.58e-14;24 | ||
|ontology_enrichment_celltype_v019_2=CL:0000236,3.04e-16,14;CL:0000945,1.34e-14,24;CL:0000826,1.34e-14,24 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.18e-35!115;UBERON:0001017!1.26e-20!82;UBERON:0000073!8.39e-20!94;UBERON:0001016!8.39e-20!94;UBERON:0005743!1.22e-19!86;UBERON:0004121!3.19e-18!169;UBERON:0001049!6.37e-18!57;UBERON:0005068!6.37e-18!57;UBERON:0006241!6.37e-18!57;UBERON:0007135!6.37e-18!57;UBERON:0002616!8.72e-18!59;UBERON:0000924!5.61e-17!173;UBERON:0006601!5.61e-17!173;UBERON:0000955!8.74e-17!69;UBERON:0006238!8.74e-17!69;UBERON:0000153!1.04e-15!129;UBERON:0007811!1.04e-15!129;UBERON:0000033!6.12e-15!123;UBERON:0003075!5.17e-14!86;UBERON:0007284!5.17e-14!86;UBERON:0003080!3.90e-13!42;UBERON:0001893!7.26e-13!34;UBERON:0002780!1.24e-12!41;UBERON:0001890!1.24e-12!41;UBERON:0006240!1.24e-12!41;UBERON:0001869!1.37e-12!32;UBERON:0002346!1.85e-12!90;UBERON:0002020!2.43e-12!34;UBERON:0003528!2.43e-12!34;UBERON:0002791!2.56e-12!33;UBERON:0000956!2.09e-11!25;UBERON:0000203!2.09e-11!25;UBERON:0001950!6.12e-10!20;UBERON:0003056!1.09e-09!61;UBERON:0002619!3.22e-09!22 | |ontology_enrichment_uberon=UBERON:0007023!3.18e-35!115;UBERON:0001017!1.26e-20!82;UBERON:0000073!8.39e-20!94;UBERON:0001016!8.39e-20!94;UBERON:0005743!1.22e-19!86;UBERON:0004121!3.19e-18!169;UBERON:0001049!6.37e-18!57;UBERON:0005068!6.37e-18!57;UBERON:0006241!6.37e-18!57;UBERON:0007135!6.37e-18!57;UBERON:0002616!8.72e-18!59;UBERON:0000924!5.61e-17!173;UBERON:0006601!5.61e-17!173;UBERON:0000955!8.74e-17!69;UBERON:0006238!8.74e-17!69;UBERON:0000153!1.04e-15!129;UBERON:0007811!1.04e-15!129;UBERON:0000033!6.12e-15!123;UBERON:0003075!5.17e-14!86;UBERON:0007284!5.17e-14!86;UBERON:0003080!3.90e-13!42;UBERON:0001893!7.26e-13!34;UBERON:0002780!1.24e-12!41;UBERON:0001890!1.24e-12!41;UBERON:0006240!1.24e-12!41;UBERON:0001869!1.37e-12!32;UBERON:0002346!1.85e-12!90;UBERON:0002020!2.43e-12!34;UBERON:0003528!2.43e-12!34;UBERON:0002791!2.56e-12!33;UBERON:0000956!2.09e-11!25;UBERON:0000203!2.09e-11!25;UBERON:0001950!6.12e-10!20;UBERON:0003056!1.09e-09!61;UBERON:0002619!3.22e-09!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;8.25e-08;32!UBERON:0000956;1.50e-07;25!UBERON:0000203;1.50e-07;25!UBERON:0002037;7.91e-07;6!UBERON:0001893;8.67e-07;34 | |ontology_enrichment_uberon_v019=UBERON:0001869;8.25e-08;32!UBERON:0000956;1.50e-07;25!UBERON:0000203;1.50e-07;25!UBERON:0002037;7.91e-07;6!UBERON:0001893;8.67e-07;34 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.49e-24,114;UBERON:0001016,3.10e-12,89;UBERON:0001017,1.41e-11,81;UBERON:0001049,3.56e-08,56;UBERON:0005068,3.56e-08,56;UBERON:0006241,3.56e-08,56;UBERON:0007135,3.56e-08,56;UBERON:0001869,3.83e-08,32;UBERON:0000073,4.90e-08,53;UBERON:0002616,4.90e-08,53;UBERON:0004121,6.70e-08,171;UBERON:0000924,6.70e-08,171;UBERON:0006601,6.70e-08,171;UBERON:0000956,1.72e-07,25;UBERON:0000203,1.72e-07,25;UBERON:0003075,1.74e-07,82;UBERON:0007284,1.74e-07,82;UBERON:0001893,1.89e-07,34;UBERON:0010371,2.93e-07,104;UBERON:0002791,4.66e-07,32;UBERON:0011216,4.96e-07,223;UBERON:0000955,5.46e-07,68;UBERON:0006238,5.46e-07,68;UBERON:0002346,7.98e-07,86 | |||
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| ||
|short_description=p4@SETBP1 | |short_description=p4@SETBP1 | ||
}} | }} |
Revision as of 07:42, 21 November 2012
Short description: | p4@SETBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_SETBP1_5end |
Coexpression cluster: | C3720_Neural_duodenum_parietal_dura_Small_Astrocyte_temporal |
Association with transcript: | 57bp_to_ENST00000282030, NM_015559, uc010dni.2_5end |
EntrezGene: | SETBP1 |
HGNC: | 15573 |
UniProt: | Q9Y6X0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 3.04e-16 | 14 |
lymphocyte of B lineage | 1.34e-14 | 24 |
pro-B cell | 1.34e-14 | 24 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.49e-24 | 114 |
nervous system | 3.10e-12 | 89 |
central nervous system | 1.41e-11 | 81 |
neural tube | 3.56e-08 | 56 |
neural rod | 3.56e-08 | 56 |
future spinal cord | 3.56e-08 | 56 |
neural keel | 3.56e-08 | 56 |
cerebral hemisphere | 3.83e-08 | 32 |
regional part of nervous system | 4.90e-08 | 53 |
regional part of brain | 4.90e-08 | 53 |
ectoderm-derived structure | 6.70e-08 | 171 |
ectoderm | 6.70e-08 | 171 |
presumptive ectoderm | 6.70e-08 | 171 |
cerebral cortex | 1.72e-07 | 25 |
pallium | 1.72e-07 | 25 |
neural plate | 1.74e-07 | 82 |
presumptive neural plate | 1.74e-07 | 82 |
telencephalon | 1.89e-07 | 34 |
ecto-epithelium | 2.93e-07 | 104 |
regional part of telencephalon | 4.66e-07 | 32 |
organ system subdivision | 4.96e-07 | 223 |
brain | 5.46e-07 | 68 |
future brain | 5.46e-07 | 68 |
neurectoderm | 7.98e-07 | 86 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.