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MacroAPE 1083:Motif882: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;0;69281;0!02;69281;0;0;0!03;0;0;69281;0!04;0;0;69281;0!05;0;25627;38124;5530!06;69281;0;0;0!07;0;0;69281;0 |macroape_1083_sample_pvalues...")
 
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-111F4;0.633969!10851-111F5;0.908334!10852-111F6;0.735323!10853-111F7;0.328167!10854-111F8;0.714445!10855-111F9;0.88327!10856-111G1;0.101138!10847-111F1;0.876975!10846-111E9;0.367008!10848-111F2;0.798138!10845-111E8;0.9165!10857-111G2;0.191227!10858-111G3;0.770774!10156-103A3;0.244437!11901-125F2;0.182796!11902-125F3;0.509426!11903-125F4;0.247909!10689-109F5;0.424213!10648-109A9;0.368271!10784-110H1;0.175504!10744-110C6;0.298332!10772-110F7;0.283899!10474-106I6;0.398315!10600-108E6;0.272389!10684-109E9;0.00710401!12226-129F3;0.838415!12227-129F4;0.382892!10508-107D4;0.301574!10539-107G8;0.190121!10607-108F4;0.394745!10555-107I6;0.496677!10774-110F9;0.601018!10637-108I7;0.524045!10663-109C6;0.681157!10728-110A8;0.675752!10729-110A9;0.710266!10430-106D7;0.458107!10730-110B1;0.395628!10813-111B3;0.731138!10812-111B2;0.764701!10037-101F1;0.505186!10172-103C1;0.159069!10163-103B1;0.188024!10076-102A4;0.18903!10073-102A1;0.17189!10036-101E9;0.13225!10195-103E6;0.148274!10277-104E7;0.169072!10434-106E2;0.358397!10550-107I1;0.844265!10545-107H5;0.174079!10544-107H4;0.564097!10704-109H2;0.225629!10510-107D6;0.0726136!10558-107I9;0.833186!10020-101D2;0.657141!10732-110B3;0.225142!10049-101G4;0.971561!10698-109G5;0.771531!10437-106E5;0.264854!10417-106C3;0.492799!10035-101E8;0.405249!10171-103B9;0.175283!10157-103A4;0.180045!10034-101E7;0.190017!10072-101I9;0.162415!10199-103F1;0.125644!10200-103F2;0.461372!10697-109G4;0.245727!10723-110A3;0.347846!10179-103C8;0.163921!10160-103A7;0.207904!10180-103C9;0.198464!10162-103A9;0.376397!10021-101D3;0.244117!10840-111E3;0.183425!10706-109H4;0.269798!10033-101E6;0.66034!10032-101E5;0.197625!10490-107B4;0.148084!10439-106E7;0.381092!10022-101D4;0.277113!10176-103C5;0.302601!10469-106I1;0.153107!10067-101I4;0.208376!10411-106B6;0.180852!10471-106I3;0.440583!10030-101E3;0.780066!10475-106I7;0.177981!10787-110H4;0.946271!10477-106I9;0.809654!10695-109G2;0.732455!11771-123I7;0.373956!11772-123I8;0.929857!11773-123I9;0.542207!10093-102C3;0.55563!10442-106F1;0.355957!10442-106F1;0.566316!10201-103F3;0.555289!10639-108I9;0.351639!11843-124H7;0.982989!11841-124H5;0.295049!10693-109F9;0.770733!10436-106E4;0.551115!10483-107A6;0.728941!10282-104F3;0.24015!10023-101D5;0.522422!10066-101I3;0.291424!10065-101I2;0.216542!10800-110I8;0.304065!10610-108F7;0.276364!10841-111E4;0.505617!10541-107H1;0.372694!10842-111E5;0.280077!10562-108A4;0.501029!10024-101D6;0.5851!10064-101I1;0.310382!10609-108F6;0.204771!10048-101G3;0.287777!10781-110G7;0.256845!10181-103D1;0.330127!10159-103A6;0.223562!10056-101H2;0.216524!10737-110B8;0.184267!10025-101D7;0.447607!10044-101F8;0.585347!10424-106D1;0.267667!10463-106H4;0.229508!10616-108G4;0.649029!10486-107A9;0.964285!10062-101H8;0.844325!10202-103F4;0.381898!10158-103A5;0.341808!10441-106E9;0.268464!10031-101E4;0.796705!10063-101H9;0.135025!10063-101H9;0.13686!11763-123H8;0.200396!11765-123I1;0.3296!11768-123I4;0.301937!10807-111A6;0.489954!10790-110H7;0.586875!10798-110I6;0.442388!10786-110H3;0.701582!10591-108D6;0.113677!10593-108D8;0.578145!10590-108D5;0.539142!10026-101D8;0.33864!10096-102C6;0.22687!10168-103B6;0.988453!10154-103A1;0.200266!10209-103G2;0.18347!10061-101H7;0.22747!10027-101D9;0.318296!10043-101F7;0.646469!10783-110G9;0.997975!10028-101E1;0.789751!10060-101H6;0.504033!10203-103F5;0.341135!10059-101H5;0.266383!10047-101G2;0.233511!10029-101E2;0.163406!10058-101H4;0.257001!10418-106C4;0.323473!10492-107B6;0.359182!10694-109G1;0.19606!10797-110I5;0.792248!10057-101H3;0.206732!10100-102D1;0.181293!10055-101H1;0.191644!10204-103F6;0.332958!10191-103E2;0.45357!10563-108A5;0.220947
|name=motif882
|name=motif882
|tomtom_result=SP1#MA0079.2;0;0.00908136;4.32273;1;7;GAGGGAG;GGGGGCGGGG;-!Trl#MA0205.1;0;0.0100257;4.77224;1;7;GAGGGAG;GAGAGAGCAA;-!SP1#MA0079.2;0;0.0127122;6.05101;1;7;GAGGGAG;GGGGCGGGGT;+!SPI1#MA0080.2;-1;0.0127729;6.07988;1;6;GAGGGAG;AGGAAGT;+!MZF1_5-13#MA0057.1;1;0.0159508;7.5926;1;7;GAGGGAG;GGAGGGGGAA;+!z#MA0255.1;2;0.0198687;9.45752;1;7;GAGGGAG;TTGAGTGATT;+
}}
}}

Latest revision as of 13:02, 7 September 2012

Full Name: motif882

Motif matrix
POACGT
0100692810
0269281000
0300692810
0400692810
05025627381245530
0669281000
0700692810

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
SP1#MA0079.200.009081364.3227317GAGGGAGGGGGGCGGGG-
Trl#MA0205.100.01002574.7722417GAGGGAGGAGAGAGCAA-
SP1#MA0079.200.01271226.0510117GAGGGAGGGGGCGGGGT+
SPI1#MA0080.2-10.01277296.0798816GAGGGAGAGGAAGT+
MZF1_5-13#MA0057.110.01595087.592617GAGGGAGGGAGGGGGAA+
z#MA0255.120.01986879.4575217GAGGGAGTTGAGTGATT+
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