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MacroAPE 1083:CNhs13801 bl f2: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;493.6507775061557;227.07605775174702;1051.0712919107748;559.2033926525146!2;264.15042779009104;643.7285474734202;1031.5977760214612;391.5247...")
 
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7409!12184-129A6;0.207572!10809-111A8;0.133497!10597-108E3;0.0477215!10717-109I6;0.338304!10455-106G5;0.00206336!10534-107G3;0.0411694!10429-106D6;0.00579493!10464-106H5;0.169678!10827-111C8;0.0229208!10789-110H6;0.0348979!10828-111C9;0.0139761!10788-110H5;0.0524599!10792-110H9;0.00251936!10765-110E9;0.00870025!10829-111D1;0.00811801!10830-111D2;0.00766958!10831-111D3;0.0562235!10832-111D4;0.00793628!10833-111D5;0.000848637!10764-110E8;0.00541512!10770-110F5;0.00826792!10399-106A3;0.0113177!10400-106A4;0.00238237!10405-106A9;0.00263572!10834-111D6;0.00173577!10835-111D7;0.0052273!10836-111D8;0.0206945!10837-111D9;0.0329439!10699-109G6;0.0298701!10802-111A1;0.0603476!10796-110I4;0.0950542!10010-101C1;0.0273514!10810-111A9;0.0202226!10421-106C7;0.0166752!10708-109H6;0.0708731!12235-129G3;0.00948625!12236-129G4;0.740261!12237-129G5;0.961914!10167-103B5;0.964503!10151-102I7;0.000419351!10428-106D5;0.000246019!10795-110I3;0.0619732!10805-111A4;0.00236936!10052-101G7;0.0273979!10189-103D9;0.00752203!10589-108D4;0.00213223!10425-106D2;0.419895!10427-106D4;0.642975!10702-109G9;0.00755951!10432-106D9;0.486091!10496-107C1;0.0181412!10718-109I7;0.0391437!10011-101C2;0.0191135!10053-101G8;0.00631348!10686-109F2;0.77681!10084-102B3;0.0717913!10012-101C3;0.000419018!10085-102B4;0.00017646!10482-107A5;0.00221812!10419-106C5;0.0780875!10080-102A8;0.0323307!10760-110E4;0.119!10709-109H7;0.0151985!10710-109H8;0.00483314!10703-109H1;0.00709504!10719-109I8;0.907178!10642-109A3;0.181877!10177-103C6;0.760399!10164-103B2;0.000217517!10173-103C2;0.000249901!10166-103B4;0.00264365!10083-102B2;0.00105424!10188-103D8;0.00114509!10552-107I3;0.000265214!10553-107I4;0.00159398!10013-101C4;0.197333!10536-107G5;0.00564501!10618-108G6;0.278452!10423-106C9;0.0209795!10785-110H2;0.0142378!12238-129G6;0.00538289!12239-129G7;0.402905!12240-129G8;0.649882!10416-106C2;0.408941!10801-110I9;0.0577651!10766-110F1;0.00477566!10824-111C5;0.0132827!10825-111C6;0.0117983!10826-111C7;0.012571!10454-106G4;0.0165975!10409-106B4;0.0098259!10638-108I8;0.0073572!10636-108I6;0.000276259!10513-107D9;0.000597312!10420-106C6;0.00532624!10082-102B1;0.0736641!10014-101C5;0.00637767!10070-101I7;0.00609928!10452-106G2;0.00833451!10453-106G3;0.0658733!10449-106F8;0.0303449!10042-101F6;0.0283976!10069-101I6;0.000148554!10193-103E4;0.00250053!10631-108I1;0.000226011!10438-106E6;0.0149712!10488-107B2;0.0958435!10196-103E7;0.0136621!10071-101I8;0.0177661!10071-101I8;0.00170625!10041-101F5;0.00214234!10451-106G1;0.00883425!10450-106F9;0.0272333!10604-108F1;0.0119008!10605-108F2;0.0169406!10606-108F3;0.00185438!10603-108E9;0.0110733!10497-107C2;0.0111745!10448-106F7;0.00163101!10643-109A4;0.0195205!10426-106D3;0.0120272!10431-106D8;0.0278467!10197-103E8;0.00461756!10443-106F2;0.00853264!10815-111B5;0.0026409!10816-111B6;0.0034384!10817-111B7;0.00512237!10015-101C6;0.00305022!10410-106B5;0.00857259!10054-101G9;0.140419!10758-110E2;0.00132193!10711-109H9;0.00393119!10040-101F4;0.00674222!10470-106I2;0.000149076!10415-106C1;0.0206187!10198-103E9;0.00772726!10614-108G2;0.00555832!10612-108F9;0.153554!10549-107H9;0.0248654!10615-108G3;0.0412578!10487-107B1;0.740709!10433-106E1;0.000916032!10688-109F4;0.00608113!10444-106F3;0.0346443!10444-106F3;0.551741!10485-107A8;0.651458!10413-106B8;0.00521706!10175-103C4;0.0926184!10161-103A8;0.000201652!12131-128D7;0.00029255!10624-108H3;0.194439!10712-109I1;0.0872513!10205-103F7;0.0182502!10206-103F8;0.0022373!10207-103F9;0.000733838!10050-101G5;0.0117692!10051-101G6;0.0165168!10016-101C7;0.00212039!10046-101G1;0.00131906!10778-110G4;0.00101929!10633-108I3;0.571507!10818-111B8;0.0258159!10819-111B9;0.00543663!10820-111C1;0.00325735!10484-107A7;0.00697575!10808-111A7;0.032123!10169-103B7;0.0104266!10153-102I9;0.000268201!13425-144D5;0.000267982!13433-144E4;0.049614!13437-144E8;0.11472!11904-125F5;0.062554!11905-125F6;0.25869!10039-101F3;0.0768796!10791-110H8;0.000160509!10017-101C8;0.0280117!10045-101F9;0.127815!10509-107D5;0.0307807!10839-111E2;0.000152105!10692-109F8;0.000669232!10079-102A7;0.0269032!10078-102A6;0.00286568!10721-110A1;0.00569952!10569-108B2;0.0351364!10570-108B3;0.186154!10571-108B4;0.0913241!10647-109A8;0.0538547!10752-110D5;0.0432028!10782-110G8;0.00507343!10726-110A6;0.694739!10018-101C9;0.007971!10086-102B5;0.8035!10182-103D2;0.276177!10165-103B3;0.0002139!10499-107C4;0.000210682!10408-106B3;0.00133642!10019-101D1;0.0273579!10068-101I5;0.0851399!10075-102A3;0.029351!10077-102A5;0.0737139!10727-110A7;0.0143302!10775-110G1;0.0434917!10412-106B7;0.0537094!12231-129F8;0.179372!12232-129F9;0.322479!12233-129G1;0.192695!12234-129G2;0.260096!10414-106B9;0.796525!10170-103B8;0.0793171!10183-103D3;0.000157268!10150-102I6;0.000195632!10174-103C3;0.000161021!10155-103A2;0.000310184!10038-101F2;0.000246416!10838-111E1;0.000139569!10759-110E3;0.316322!10514-107E1;0.0111725!10465-106H6;0.00804442!10691-109F7;0.018308!10843-111E6;0.0117371!10844-111E7;0.813801!11747-123G1;0.360892!11748-123G2;0.754058!11749-123G3;0.764875!11750-123G4;0.792345!11751-123G5;0.512876!11840-124H4;0.494255!11752-123G6;0.298716!11753-123G7;0.350887!11754-123G8;0.574587!11755-123G9;0.424028!11756-123H1;0.0100397!11833-124G6;0.375979!11760-123H5;0.515447!11836-124G9;0.746448!11758-123H3;0.978828!11835-124G8;0.668889!11762-123H7;0.359614!11838-124H2;0.987851!11757-123H2;0.304513!11759-123H4;0.797894!11761-123H6;0.553236!11842-124H6;0.738987!11837-124H1;0.966443!10568-108B1;0.215876!13230-141I8;0.810925!13231-141I9;0.0968327!10696-109G3;0.0945721!10493-107B7;0.10906!10494-107B8;0.129169!10850-111F4;0.278129!10851-111F5;0.00603427!10852-111F6;0.0364319!10853-111F7;0.0232229!10854-111F8;0.00978331!10855-111F9;0.057097!10856-111G1;0.968067!10847-111F1;0.149996!10846-111E9;0.0502844!10848-111F2;0.0452423!10845-111E8;0.0156428!10857-111G2;0.0136117!10858-111G3;0.0003015!10156-103A3;0.0098168!11901-125F2;0.000164843!11902-125F3;0.0661923!11903-125F4;0.13274!10689-109F5;0.0647577!10648-109A9;0.00405092!10784-110H1;0.000875084!10744-110C6;0.0258767!10772-110F7;0.321577!10474-106I6;0.00111623!10600-108E6;0.0754809!10684-109E9;0.00588483!12226-129F3;0.0658912!12227-129F4;0.030843!10508-107D4;0.0490276!10539-107G8;0.262215!10607-108F4;0.122806!10555-107I6;0.0258717!10774-110F9;0.69659!10637-108I7;0.0073419!10663-109C6;0.215259!10728-110A8;0.229385!10729-110A9;0.125515!10430-106D7;0.207367!10730-110B1;0.0630074!10813-111B3;0.756445!10812-111B2;0.207506!10037-101F1;0.800617!10172-103C1;0.000140503!10163-103B1;0.000228515!10076-102A4;0.000142337!10073-102A1;0.000189882!10036-101E9;0.0027768!10195-103E6;0.000212162!10277-104E7;0.000211423!10434-106E2;0.000132649!10550-107I1;0.0375451!10545-107H5;0.00298192!10544-107H4;0.0691029!10704-109H2;0.054192!10510-107D6;0.344304!10558-107I9;0.0806896!10020-101D2;0.0497289!10732-110B3;0.00832648!10049-101G4;0.25187!10698-109G5;0.202972!10437-106E5;0.0164296!10417-106C3;0.000255828!10035-101E8;0.0136327!10171-103B9;0.000148318!10157-103A4;0.000176333!10034-101E7;0.00017136!10072-101I9;0.000194761!10199-103F1;0.00505798!10200-103F2;0.0828085!10697-109G4;0.00333775!10723-110A3;0.46353!10179-103C8;0.040301!10160-103A7;8.78599e-05!10180-103C9;8.51441e-05!10162-103A9;0.000497357!10021-101D3;0.000587635!10840-111E3;0.0392659!10706-109H4;0.0153209!10033-101E6;0.0308706!10032-101E5;9.66238e-05!10490-107B4;0.000191413!10439-106E7;0.00201145!10022-101D4;0.00456539!10176-103C5;0.00565502!10469-106I1;0.000177894!10067-101I4;0.0115972!10411-106B6;0.00251004!10471-106I3;0.000743214!10030-101E3;0.000109743!10475-106I7;0.000755175!10787-110H4;0.21337!10477-106I9;0.113258!10695-109G2;0.767363!11771-123I7;0.112272!11772-123I8;0.0307533!11773-123I9;0.38669!10093-102C3;0.917022!10442-106F1;0.0413074!10442-106F1;0.00784139!10201-103F3;0.0122745!10639-108I9;0.0204593!11843-124H7;0.0761222!11841-124H5;0.013361!10693-109F9;0.0327146!10436-106E4;0.0313048!10483-107A6;0.0485395!10282-104F3;0.00514538!10023-101D5;0.00858922!10066-101I3;0.00594951!10065-101I2;0.00880561!10800-110I8;0.005123!10610-108F7;0.409405!10841-111E4;0.904693!10541-107H1;0.116083!10842-111E5;0.0686292!10562-108A4;0.494711!10024-101D6;0.864027!10064-101I1;0.00498733!10609-108F6;0.0029877!10048-101G3;0.846297!10781-110G7;0.00510732!10181-103D1;0.771295!10159-103A6;0.000407959!10056-101H2;0.000123409!10737-110B8;0.000549673!10025-101D7;0.659863!10044-101F8;0.156532!10424-106D1;0.0187796!10463-106H4;0.0125763!10616-108G4;0.04593!10486-107A9;0.0266329!10062-101H8;0.0182736!10202-103F4;0.0015481!10158-103A5;0.00858015!10441-106E9;0.000324667!10031-101E4;0.0234242!10063-101H9;0.000277149!10063-101H9;0.00369437!11763-123H8;0.00177929!11765-123I1;0.177529!11768-123I4;0.255294!10807-111A6;0.183605!10790-110H7;0.123979!10798-110I6;0.0507312!10786-110H3;0.4932!10591-108D6;0.00384525!10593-108D8;0.0149565!10590-108D5;0.0583906!10026-101D8;0.00477784!10096-102C6;0.526765!10168-103B6;0.0144619!10154-103A1;0.000179478!10209-103G2;0.00016292!10061-101H7;0.00820492!10027-101D9;0.00273!10043-101F7;0.558093!10783-110G9;0.0137785!10028-101E1;0.00201354!10060-101H6;0.0969392!10203-103F5;0.00292975!10059-101H5;0.00472562!10047-101G2;0.0040176!10029-101E2;0.00196027!10058-101H4;0.0364655!10418-106C4;0.00393134!10492-107B6;0.0124352!10694-109G1;0.00363791!10797-110I5;0.706353!10057-101H3;0.0138136!10100-102D1;0.00416386!10055-101H1;0.00449395!10204-103F6;0.00523075!10191-103E2;0.0226677!10563-108A5;0.00165398
|name=CNhs13801_bl_f2
|name=CNhs13801_bl_f2
|tomtom_result=NHLH1#MA0048.1;2;0.00130149;0.619508;0.482762;10;GGAGCTGGGG;ACGCAGCTGCGC;-!ACE2#MA0267.1;-2;0.00203679;0.969513;0.482762;7;GGAGCTGGGG;TGCTGGT;-!Tcfcp2l1#MA0145.1;6;0.00233157;1.10983;0.482762;8;GGAGCTGGGG;CTGGTTTGAACTGG;-!Myf#MA0055.1;2;0.00253884;1.20849;0.482762;10;GGAGCTGGGG;CAGCAGCTGCTG;+!CRZ1#MA0285.1;0;0.00464958;2.2132;0.736768;9;GGAGCTGGGG;GTGGCTTAG;-!SWI5#MA0402.1;-2;0.00612134;2.91376;0.831413;8;GGAGCTGGGG;TGCTGGTT;+!Zfx#MA0146.1;0;0.0101047;4.80982;0.960299;10;GGAGCTGGGG;GGGGCCGAGGCCTG;+!REST#MA0138.2;11;0.010997;5.23455;0.960299;8;GGAGCTGGGG;GCGCTGTCCATGGTGCTGA;+!SP1#MA0079.1;0;0.011227;5.34405;0.960299;10;GGAGCTGGGG;GGGGCGGGGT;+!BRCA1#MA0133.1;-1;0.0116812;5.56024;0.960299;7;GGAGCTGGGG;GTGTTGT;-!Mafb#MA0117.1;-3;0.0121205;5.76935;0.960299;7;GGAGCTGGGG;GCTGACGG;+!REST#MA0138.2;12;0.014466;6.88582;0.998691;9;GGAGCTGGGG;GGCGCTGTCCATGGTGCTGAA;-!Pax4#MA0068.1;5;0.0172816;8.22604;0.998691;10;GGAGCTGGGG;GGGGGGGGAGTGGAGTATTGGAAATTTTTC;-
}}
}}

Latest revision as of 13:17, 7 September 2012

Full Name: CNhs13801_bl_f2

Motif matrix
POACGT
1493.6507775061557227.076057751747021051.0712919107748559.2033926525146
2264.15042779009104643.72854747342021031.5977760214612391.52476853621886
3995.202650781577211.789164262356934688.5432913329959635.4664134442626
435.1533386415820742.843136954550232289.84464401878863.1604002062717984
50.02331.0015198211920.00.0
60.00.00.02331.001519821192
70.00.02331.0015198211920.0
8462.90058086180414537.46747760807681070.2116292360597260.421832115253
91006.42275126102877.6646733965961571044.5781955964696272.33589956709665
10644.580186815697380.591051929279271389.746418163237216.0838629129806

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
NHLH1#MA0048.120.001301490.6195080.48276210GGAGCTGGGGACGCAGCTGCGC-
ACE2#MA0267.1-20.002036790.9695130.4827627GGAGCTGGGGTGCTGGT-
Tcfcp2l1#MA0145.160.002331571.109830.4827628GGAGCTGGGGCTGGTTTGAACTGG-
Myf#MA0055.120.002538841.208490.48276210GGAGCTGGGGCAGCAGCTGCTG+
CRZ1#MA0285.100.004649582.21320.7367689GGAGCTGGGGGTGGCTTAG-
SWI5#MA0402.1-20.006121342.913760.8314138GGAGCTGGGGTGCTGGTT+
Zfx#MA0146.100.01010474.809820.96029910GGAGCTGGGGGGGGCCGAGGCCTG+
REST#MA0138.2110.0109975.234550.9602998GGAGCTGGGGGCGCTGTCCATGGTGCTGA+
SP1#MA0079.100.0112275.344050.96029910GGAGCTGGGGGGGGCGGGGT+
BRCA1#MA0133.1-10.01168125.560240.9602997GGAGCTGGGGGTGTTGT-
Mafb#MA0117.1-30.01212055.769350.9602997GGAGCTGGGGGCTGACGG+
REST#MA0138.2120.0144666.885820.9986919GGAGCTGGGGGGCGCTGTCCATGGTGCTGAA-
Pax4#MA0068.150.01728168.226040.99869110GGAGCTGGGGGGGGGGGGAGTGGAGTATTGGAAATTTTTC-
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