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MacroAPE 1083:Motif CTGGGN: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;312;0;0!02;0;0;0;312!03;0;0;312;0!04;0;0;312;0!05;0;0;312;0!06;312;0;0;0 |macroape_1083_sample_pvalues=11376-118A8;0.147505!11327-117E4;...")
 
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0.699053!10717-109I6;0.565052!10455-106G5;0.967556!10534-107G3;0.617118!10429-106D6;0.699239!10464-106H5;0.114195!10827-111C8;0.0621007!10789-110H6;0.275249!10828-111C9;0.378952!10788-110H5;0.0342606!10792-110H9;0.208408!10765-110E9;0.19843!10829-111D1;0.395248!10830-111D2;0.593583!10831-111D3;0.446338!10832-111D4;0.444652!10833-111D5;0.382895!10764-110E8;0.360408!10770-110F5;0.0892973!10399-106A3;0.391205!10400-106A4;0.292147!10405-106A9;0.296054!10834-111D6;0.353326!10835-111D7;0.396498!10836-111D8;0.475715!10837-111D9;0.279456!10699-109G6;0.204353!10802-111A1;0.448627!10796-110I4;0.109544!10010-101C1;0.660824!10810-111A9;0.0519127!10421-106C7;0.830817!10708-109H6;0.2126!12235-129G3;0.957569!12236-129G4;0.995167!12237-129G5;0.963502!10167-103B5;0.606618!10151-102I7;0.800974!10428-106D5;0.957028!10795-110I3;0.873642!10805-111A4;0.157337!10052-101G7;0.810967!10189-103D9;0.212885!10589-108D4;0.326206!10425-106D2;0.574997!10427-106D4;0.0354331!10702-109G9;0.253752!10432-106D9;0.136763!10496-107C1;0.897793!10718-109I7;0.920397!10011-101C2;0.414185!10053-101G8;0.160776!10686-109F2;0.177341!10084-102B3;0.0882872!10012-101C3;0.937058!10085-102B4;0.994059!10482-107A5;0.667949!10419-106C5;0.468693!10080-102A8;0.60203!10760-110E4;0.0755401!10709-109H7;0.730605!10710-109H8;0.780875!10703-109H1;0.957108!10719-109I8;0.183089!10642-109A3;0.4884!10177-103C6;0.79965!10164-103B2;0.775991!10173-103C2;0.860704!10166-103B4;0.785717!10083-102B2;0.958063!10188-103D8;0.728253!10552-107I3;0.942302!10553-107I4;0.396107!10013-101C4;0.613407!10536-107G5;0.0651689!10618-108G6;0.648293!10423-106C9;0.715351!10785-110H2;0.931087!12238-129G6;0.762879!12239-129G7;0.6039!12240-129G8;0.38132!10416-106C2;0.709867!10801-110I9;0.0444717!10766-110F1;0.107835!10824-111C5;0.288706!10825-111C6;0.572366!10826-111C7;0.65041!10454-106G4;0.707318!10409-106B4;0.615877!10638-108I8;0.347236!10636-108I6;0.998202!10513-107D9;0.954763!10420-106C6;0.74672!10082-102B1;0.767854!10014-101C5;0.161925!10070-101I7;0.196544!10452-106G2;0.631519!10453-106G3;0.11197!10449-106F8;0.0852582!10042-101F6;0.0911298!10069-101I6;0.67114!10193-103E4;0.340155!10631-108I1;0.866851!10438-106E6;0.556658!10488-107B2;0.53087!10196-103E7;0.760394!10071-101I8;0.309471!10071-101I8;0.502276!10041-101F5;0.482739!10451-106G1;0.393346!10450-106F9;0.81739!10604-108F1;0.784394!10605-108F2;0.578423!10606-108F3;0.41183!10603-108E9;0.644791!10497-107C2;0.275472!10448-106F7;0.820757!10643-109A4;0.689031!10426-106D3;0.435246!10431-106D8;0.166399!10197-103E8;0.688722!10443-106F2;0.610923!10815-111B5;0.824712!10816-111B6;0.341814!10817-111B7;0.281809!10015-101C6;0.406413!10410-106B5;0.0524362!10054-101G9;0.988652!10758-110E2;0.653579!10711-109H9;0.796877!10040-101F4;0.977081!10470-106I2;0.831192!10415-106C1;0.600427!10198-103E9;0.437043!10614-108G2;0.243826!10612-108F9;0.938738!10549-107H9;0.862307!10615-108G3;0.772395!10487-107B1;0.897206!10433-106E1;0.916323!10688-109F4;0.586546!10444-106F3;0.670379!10444-106F3;0.138129!10485-107A8;0.131209!10413-106B8;0.475175!10175-103C4;0.939918!10161-103A8;0.925636!12131-128D7;0.48762!10624-108H3;0.0305573!10712-109I1;0.068759!10205-103F7;0.165875!10206-103F8;0.197273!10207-103F9;0.144995!10050-101G5;0.0786826!10051-101G6;0.116377!10016-101C7;0.162774!10046-101G1;0.0545263!10778-110G4;0.180758!10633-108I3;0.275074!10818-111B8;0.76516!10819-111B9;0.712419!10820-111C1;0.728485!10484-107A7;0.707564!10808-111A7;0.315014!10169-103B7;0.786208!10153-102I9;0.859522!13425-144D5;0.864273!13433-144E4;0.577203!13437-144E8;0.519986!11904-125F5;0.542396!11905-125F6;0.140686!10039-101F3;0.351105!10791-110H8;0.839748!10017-101C8;0.549164!10045-101F9;0.390753!10509-107D5;0.379579!10839-111E2;0.770158!10692-109F8;0.702929!10079-102A7;0.813212!10078-102A6;0.10269!10721-110A1;0.154362!10569-108B2;0.941096!10570-108B3;0.519584!10571-108B4;0.746045!10647-109A8;0.608973!10752-110D5;0.403077!10782-110G8;0.433028!10726-110A6;0.0984667!10018-101C9;0.831007!10086-102B5;0.284909!10182-103D2;0.729343!10165-103B3;0.859255!10499-107C4;0.842787!10408-106B3;0.997034!10019-101D1;0.065204!10068-101I5;0.341606!10075-102A3;0.225048!10077-102A5;0.421506!10727-110A7;0.824284!10775-110G1;0.436183!10412-106B7;0.406051!12231-129F8;0.11699!12232-129F9;0.0215473!12233-129G1;0.0228672!12234-129G2;0.0309785!10414-106B9;0.0762051!10170-103B8;0.968046!10183-103D3;0.775108!10150-102I6;0.739045!10174-103C3;0.866892!10155-103A2;0.684102!10038-101F2;0.782429!10838-111E1;0.900944!10759-110E3;0.64511!10514-107E1;0.81827!10465-106H6;0.478962!10691-109F7;0.722171!10843-111E6;0.75535!10844-111E7;0.225038!11747-123G1;0.138746!11748-123G2;0.162328!11749-123G3;0.103082!11750-123G4;0.0411457!11751-123G5;0.0482826!11840-124H4;0.0269687!11752-123G6;0.13478!11753-123G7;0.190378!11754-123G8;0.0486953!11755-123G9;0.155127!11756-123H1;0.276315!11833-124G6;0.39105!11760-123H5;0.805665!11836-124G9;0.417514!11758-123H3;0.442655!11835-124G8;0.295688!11762-123H7;0.763161!11838-124H2;0.50522!11757-123H2;0.895125!11759-123H4;0.753704!11761-123H6;0.258691!11842-124H6;0.912527!11837-124H1;0.711585!10568-108B1;0.459271!13230-141I8;0.398827!13231-141I9;0.0935742!10696-109G3;0.0680176!10493-107B7;0.0115508!10494-107B8;0.743142!10850-111F4;0.622222!10851-111F5;0.284695!10852-111F6;0.680822!10853-111F7;0.712624!10854-111F8;0.962642!10855-111F9;0.739773!10856-111G1;0.500949!10847-111F1;0.30817!10846-111E9;0.503397!10848-111F2;0.542185!10845-111E8;0.897335!10857-111G2;0.869746!10858-111G3;0.778553!10156-103A3;0.772626!11901-125F2;0.877098!11902-125F3;0.131627!11903-125F4;0.0966998!10689-109F5;0.32498!10648-109A9;0.80938!10784-110H1;0.995131!10744-110C6;0.853161!10772-110F7;0.0240667!10474-106I6;0.682049!10600-108E6;0.31477!10684-109E9;0.0556589!12226-129F3;0.567039!12227-129F4;0.840498!10508-107D4;0.829706!10539-107G8;0.334437!10607-108F4;0.706954!10555-107I6;0.575233!10774-110F9;0.462045!10637-108I7;0.857782!10663-109C6;0.511481!10728-110A8;0.954383!10729-110A9;0.965505!10430-106D7;0.0306814!10730-110B1;0.291897!10813-111B3;0.256736!10812-111B2;0.413722!10037-101F1;0.914579!10172-103C1;0.83348!10163-103B1;0.793587!10076-102A4;0.842014!10073-102A1;0.698416!10036-101E9;0.354586!10195-103E6;0.937301!10277-104E7;0.996298!10434-106E2;0.391676!10550-107I1;0.599448!10545-107H5;0.882943!10544-107H4;0.103715!10704-109H2;0.928281!10510-107D6;0.0986048!10558-107I9;0.925942!10020-101D2;0.740384!10732-110B3;0.0458902!10049-101G4;0.347892!10698-109G5;0.341238!10437-106E5;0.972995!10417-106C3;0.821531!10035-101E8;0.883738!10171-103B9;0.798162!10157-103A4;0.73134!10034-101E7;0.926033!10072-101I9;0.843459!10199-103F1;0.386875!10200-103F2;0.40747!10697-109G4;0.177392!10723-110A3;0.569225!10179-103C8;0.993405!10160-103A7;0.948563!10180-103C9;0.721599!10162-103A9;0.97631!10021-101D3;0.890011!10840-111E3;0.229107!10706-109H4;0.196782!10033-101E6;0.286447!10032-101E5;0.809467!10490-107B4;0.896054!10439-106E7;0.95087!10022-101D4;0.640598!10176-103C5;0.153836!10469-106I1;0.91504!10067-101I4;0.500221!10411-106B6;0.948549!10471-106I3;0.961241!10030-101E3;0.702956!10475-106I7;0.475382!10787-110H4;0.893341!10477-106I9;0.457204!10695-109G2;0.694857!11771-123I7;0.511131!11772-123I8;0.668298!11773-123I9;0.162877!10093-102C3;0.0984234!10442-106F1;0.131497!10442-106F1;0.890046!10201-103F3;0.956666!10639-108I9;0.319761!11843-124H7;0.54909!11841-124H5;0.726155!10693-109F9;0.977009!10436-106E4;0.851056!10483-107A6;0.950478!10282-104F3;0.877049!10023-101D5;0.219545!10066-101I3;0.0776479!10065-101I2;0.250172!10800-110I8;0.26812!10610-108F7;0.312896!10841-111E4;0.474891!10541-107H1;0.930697!10842-111E5;0.653487!10562-108A4;0.240568!10024-101D6;0.197956!10064-101I1;0.418871!10609-108F6;0.808989!10048-101G3;0.451561!10781-110G7;0.0769457!10181-103D1;0.203261!10159-103A6;0.895786!10056-101H2;0.564545!10737-110B8;0.965476!10025-101D7;0.33333!10044-101F8;0.041494!10424-106D1;0.114972!10463-106H4;0.544173!10616-108G4;0.580989!10486-107A9;0.927027!10062-101H8;0.981821!10202-103F4;0.693123!10158-103A5;0.349394!10441-106E9;0.28475!10031-101E4;0.44052!10063-101H9;0.934949!10063-101H9;0.548161!11763-123H8;0.522047!11765-123I1;0.192042!11768-123I4;0.0452674!10807-111A6;0.109216!10790-110H7;0.973187!10798-110I6;0.734826!10786-110H3;0.290272!10591-108D6;0.528796!10593-108D8;0.929543!10590-108D5;0.602751!10026-101D8;0.702285!10096-102C6;0.51987!10168-103B6;0.222401!10154-103A1;0.964611!10209-103G2;0.654067!10061-101H7;0.190388!10027-101D9;0.548234!10043-101F7;0.753455!10783-110G9;0.829691!10028-101E1;0.726138!10060-101H6;0.148995!10203-103F5;0.705668!10059-101H5;0.130963!10047-101G2;0.177992!10029-101E2;0.110392!10058-101H4;0.152295!10418-106C4;0.584925!10492-107B6;0.56134!10694-109G1;0.50799!10797-110I5;0.373286!10057-101H3;0.848001!10100-102D1;0.17121!10055-101H1;0.0782922!10204-103F6;0.295597!10191-103E2;0.0627117!10563-108A5;0.402849
|name=motif_CTGGGN
|name=motif_CTGGGN
|tomtom_result=znf143#MA0088.1;10;0.0033139;1.57742;1;6;CTGGGA;GCAAGGCATGATGGGAAATC;-!NHP10#MA0344.1;2;0.00635381;3.02441;1;6;CTGGGA;GCCGGGGA;+!PUT3#MA0358.1;1;0.00901814;4.29263;1;6;CTGGGA;CCCGGGAA;+!SWI5#MA0402.1;2;0.00974919;4.64061;1;6;CTGGGA;TGCTGGTT;+!STAT1#MA0137.2;5;0.00986352;4.69504;1;6;CTGGGA;GGTTTCCGGGAAATG;-!CEP3#MA0282.1;0;0.01013;4.82186;1;6;CTGGGA;CTCGGAAA;+!STB4#MA0391.1;0;0.0106205;5.05535;1;6;CTGGGA;CTCGGAA;+!MZF1_1-4#MA0056.1;0;0.0121978;5.80615;1;6;CTGGGA;TGGGGA;+!ACE2#MA0267.1;2;0.013067;6.21991;1;5;CTGGGA;TGCTGGT;-!Hand1::Tcfe2a#MA0092.1;3;0.0133241;6.34229;1;6;CTGGGA;GGTCTGGCAT;+!Stat3#MA0144.1;4;0.014999;7.13951;1;6;CTGGGA;CTTCCTGGAA;-
}}
}}

Latest revision as of 13:23, 7 September 2012

Full Name: motif_CTGGGN

Motif matrix
POACGT
01031200
02000312
03003120
04003120
05003120
06312000

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
znf143#MA0088.1100.00331391.5774216CTGGGAGCAAGGCATGATGGGAAATC-
NHP10#MA0344.120.006353813.0244116CTGGGAGCCGGGGA+
PUT3#MA0358.110.009018144.2926316CTGGGACCCGGGAA+
SWI5#MA0402.120.009749194.6406116CTGGGATGCTGGTT+
STAT1#MA0137.250.009863524.6950416CTGGGAGGTTTCCGGGAAATG-
CEP3#MA0282.100.010134.8218616CTGGGACTCGGAAA+
STB4#MA0391.100.01062055.0553516CTGGGACTCGGAA+
MZF1_1-4#MA0056.100.01219785.8061516CTGGGATGGGGA+
ACE2#MA0267.120.0130676.2199115CTGGGATGCTGGT-
Hand1::Tcfe2a#MA0092.130.01332416.3422916CTGGGAGGTCTGGCAT+
Stat3#MA0144.140.0149997.1395116CTGGGACTTCCTGGAA-
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MacroAPE_1083:Motif_CTGGGN&oldid=2133983"