MacroAPE 1083:Motif GGANTC: Difference between revisions
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3!10494-107B8;0.83521!10850-111F4;0.276943!10851-111F5;0.806618!10852-111F6;0.41547!10853-111F7;0.95351!10854-111F8;0.79681!10855-111F9;0.848129!10856-111G1;0.392767!10847-111F1;0.993557!10846-111E9;0.965255!10848-111F2;0.774492!10845-111E8;0.612859!10857-111G2;0.882801!10858-111G3;0.913383!10156-103A3;0.723648!11901-125F2;0.99196!11902-125F3;0.71389!11903-125F4;0.538688!10689-109F5;0.501354!10648-109A9;0.934914!10784-110H1;0.608947!10744-110C6;0.667226!10772-110F7;0.104994!10474-106I6;0.222059!10600-108E6;0.334693!10684-109E9;0.472517!12226-129F3;0.87046!12227-129F4;0.936814!10508-107D4;0.518824!10539-107G8;0.966081!10607-108F4;0.719494!10555-107I6;0.948131!10774-110F9;0.781106!10637-108I7;0.802217!10663-109C6;0.86822!10728-110A8;0.817795!10729-110A9;0.758099!10430-106D7;0.965228!10730-110B1;0.546996!10813-111B3;0.779414!10812-111B2;0.805103!10037-101F1;0.6091!10172-103C1;0.966681!10163-103B1;0.823388!10076-102A4;0.97333!10073-102A1;0.885471!10036-101E9;0.883344!10195-103E6;0.881851!10277-104E7;0.90183!10434-106E2;0.732095!10550-107I1;0.916228!10545-107H5;0.935826!10544-107H4;0.816579!10704-109H2;0.564741!10510-107D6;0.92621!10558-107I9;0.407525!10020-101D2;0.660565!10732-110B3;0.578915!10049-101G4;0.985141!10698-109G5;0.548238!10437-106E5;0.747367!10417-106C3;0.741371!10035-101E8;0.473696!10171-103B9;0.914012!10157-103A4;0.86353!10034-101E7;0.964694!10072-101I9;0.949443!10199-103F1;0.785172!10200-103F2;0.771669!10697-109G4;0.670356!10723-110A3;0.858158!10179-103C8;0.96688!10160-103A7;0.808383!10180-103C9;0.846497!10162-103A9;0.436926!10021-101D3;0.569861!10840-111E3;0.305354!10706-109H4;0.461906!10033-101E6;0.228706!10032-101E5;0.860685!10490-107B4;0.872853!10439-106E7;0.8819!10022-101D4;0.859104!10176-103C5;0.617535!10469-106I1;0.849595!10067-101I4;0.458695!10411-106B6;0.724994!10471-106I3;0.759497!10030-101E3;0.532848!10475-106I7;0.977909!10787-110H4;0.783345!10477-106I9;0.613308!10695-109G2;0.454683!11771-123I7;0.315978!11772-123I8;0.449631!11773-123I9;0.236774!10093-102C3;0.195807!10442-106F1;0.848881!10442-106F1;0.829354!10201-103F3;0.88173!10639-108I9;0.814739!11843-124H7;0.759126!11841-124H5;0.459633!10693-109F9;0.747622!10436-106E4;0.654933!10483-107A6;0.779633!10282-104F3;0.95708!10023-101D5;0.814175!10066-101I3;0.543105!10065-101I2;0.621254!10800-110I8;0.536658!10610-108F7;0.670465!10841-111E4;0.81253!10541-107H1;0.739857!10842-111E5;0.849825!10562-108A4;0.890524!10024-101D6;0.899652!10064-101I1;0.814888!10609-108F6;0.68966!10048-101G3;0.395545!10781-110G7;0.708117!10181-103D1;0.848459!10159-103A6;0.963103!10056-101H2;0.981447!10737-110B8;0.79267!10025-101D7;0.98592!10044-101F8;0.887178!10424-106D1;0.824706!10463-106H4;0.676957!10616-108G4;0.893421!10486-107A9;0.756437!10062-101H8;0.788766!10202-103F4;0.88751!10158-103A5;0.799335!10441-106E9;0.901298!10031-101E4;0.522469!10063-101H9;0.922706!10063-101H9;0.870001!11763-123H8;0.987728!11765-123I1;0.660187!11768-123I4;0.665546!10807-111A6;0.8248!10790-110H7;0.652185!10798-110I6;0.875091!10786-110H3;0.452762!10591-108D6;0.727074!10593-108D8;0.495926!10590-108D5;0.0828161!10026-101D8;0.836761!10096-102C6;0.573315!10168-103B6;0.765852!10154-103A1;0.771435!10209-103G2;0.945376!10061-101H7;0.821713!10027-101D9;0.687087!10043-101F7;0.152595!10783-110G9;0.573894!10028-101E1;0.661692!10060-101H6;0.898336!10203-103F5;0.904642!10059-101H5;0.760599!10047-101G2;0.521948!10029-101E2;0.890541!10058-101H4;0.826183!10418-106C4;0.727777!10492-107B6;0.903763!10694-109G1;0.790792!10797-110I5;0.143877!10057-101H3;0.722824!10100-102D1;0.640757!10055-101H1;0.58445!10204-103F6;0.50578!10191-103E2;0.723927!10563-108A5;0.932719 | ||
|name=motif_GGANTC | |name=motif_GGANTC | ||
|tomtom_result=NFKB1#MA0105.1;2;0.0030241;1.43947;1;6;GGAATC;GGGGATTCCCC;+!ARG81#MA0272.1;0;0.00625844;2.97902;1;6;GGAATC;AGAGTCAC;-!TBS1#MA0404.1;1;0.0172278;8.20041;1;6;GGAATC;CGGATCCG;+ | |||
}} | }} |
Latest revision as of 14:36, 7 September 2012
Full Name: motif_GGANTC
Motif matrix | |||||||||||||||||||||||||||||||||||
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Sample specificity
The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon
TomTom analysis
<br>Analyst: Michiel de Hoon and Hiroko Ohmiya
Target_ID | Optimal_offset | p-value | E-value | q-value | Overlap | Query consensus | Target consensus | Orientation |
---|---|---|---|---|---|---|---|---|
NFKB1#MA0105.1 | 2 | 0.0030241 | 1.43947 | 1 | 6 | GGAATC | GGGGATTCCCC | + |
ARG81#MA0272.1 | 0 | 0.00625844 | 2.97902 | 1 | 6 | GGAATC | AGAGTCAC | - |
TBS1#MA0404.1 | 1 | 0.0172278 | 8.20041 | 1 | 6 | GGAATC | CGGATCCG | + |