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MacroAPE 1083:MEF2(A,B,C,D): Difference between revisions

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|PWM=null
|PWM=null
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01!10717-109I6;0.684907!10455-106G5;0.316721!10534-107G3;0.0334679!10429-106D6;0.0130338!10464-106H5;0.0170989!10827-111C8;0.0182525!10789-110H6;0.00198598!10828-111C9;0.0069534!10788-110H5;0.0041191!10792-110H9;0.0795001!10765-110E9;3.95201e-06!10829-111D1;0.0033383!10830-111D2;0.0054769!10831-111D3;0.000195522!10832-111D4;0.0240931!10833-111D5;0.00466832!10764-110E8;0.0216046!10770-110F5;0.0374106!10399-106A3;0.000175613!10400-106A4;0.0390792!10405-106A9;0.0146443!10834-111D6;0.0625876!10835-111D7;0.0055227!10836-111D8;0.827563!10837-111D9;0.00774175!10699-109G6;0.200616!10802-111A1;0.487114!10796-110I4;0.00253816!10010-101C1;0.499604!10810-111A9;1.03962e-11!10421-106C7;0.052354!10708-109H6;2.14462e-05!12235-129G3;0.291699!12236-129G4;0.513407!12237-129G5;0.768045!10167-103B5;0.698191!10151-102I7;0.159074!10428-106D5;0.628509!10795-110I3;0.927072!10805-111A4;0.00381104!10052-101G7;0.647121!10189-103D9;1.49437e-05!10589-108D4;0.442741!10425-106D2;0.3831!10427-106D4;0.306341!10702-109G9;0.111343!10432-106D9;0.831171!10496-107C1;0.593338!10718-109I7;0.386595!10011-101C2;0.392508!10053-101G8;4.86529e-06!10686-109F2;0.188051!10084-102B3;0.187404!10012-101C3;0.19181!10085-102B4;0.535735!10482-107A5;0.564968!10419-106C5;0.855411!10080-102A8;0.219038!10760-110E4;0.0645848!10709-109H7;0.0389843!10710-109H8;0.110771!10703-109H1;0.0832613!10719-109I8;0.119961!10642-109A3;0.740081!10177-103C6;0.0774123!10164-103B2;0.907902!10173-103C2;0.761959!10166-103B4;0.76391!10083-102B2;0.551751!10188-103D8;0.945057!10552-107I3;0.0788408!10553-107I4;0.71215!10013-101C4;0.555091!10536-107G5;0.00666161!10618-108G6;0.787486!10423-106C9;0.510513!10785-110H2;0.771387!12238-129G6;0.446424!12239-129G7;0.31969!12240-129G8;0.927208!10416-106C2;0.838738!10801-110I9;0.091254!10766-110F1;0.123381!10824-111C5;0.00114681!10825-111C6;0.5644!10826-111C7;0.497204!10454-106G4;0.43685!10409-106B4;0.690277!10638-108I8;0.0115928!10636-108I6;0.0463991!10513-107D9;0.374067!10420-106C6;0.506768!10082-102B1;0.194965!10014-101C5;0.187319!10070-101I7;0.210971!10452-106G2;0.184108!10453-106G3;0.175108!10449-106F8;0.00944752!10042-101F6;0.0116573!10069-101I6;0.704595!10193-103E4;1.57477e-29!10631-108I1;0.622646!10438-106E6;0.0329618!10488-107B2;0.558242!10196-103E7;0.881485!10071-101I8;0.289995!10071-101I8;0.506728!10041-101F5;0.801484!10451-106G1;0.168414!10450-106F9;0.495738!10604-108F1;0.406246!10605-108F2;0.397953!10606-108F3;0.666314!10603-108E9;0.374793!10497-107C2;0.123152!10448-106F7;0.038458!10643-109A4;0.190583!10426-106D3;0.305136!10431-106D8;0.874534!10197-103E8;0.554305!10443-106F2;1.44837e-12!10815-111B5;0.379732!10816-111B6;0.863262!10817-111B7;0.523266!10015-101C6;0.667976!10410-106B5;4.83254e-12!10054-101G9;0.881274!10758-110E2;4.38702e-08!10711-109H9;0.665612!10040-101F4;0.544288!10470-106I2;0.68096!10415-106C1;0.370925!10198-103E9;0.408626!10614-108G2;0.0161721!10612-108F9;0.489921!10549-107H9;0.412865!10615-108G3;0.350278!10487-107B1;0.847656!10433-106E1;0.905809!10688-109F4;0.373133!10444-106F3;0.688341!10444-106F3;0.0146076!10485-107A8;0.0224957!10413-106B8;0.591152!10175-103C4;0.51382!10161-103A8;0.657893!12131-128D7;0.730985!10624-108H3;0.00534086!10712-109I1;0.294519!10205-103F7;0.0114312!10206-103F8;1.45967e-19!10207-103F9;4.677e-22!10050-101G5;1.62511e-15!10051-101G6;9.11966e-40!10016-101C7;2.73423e-36!10046-101G1;5.227e-35!10778-110G4;7.49318e-20!10633-108I3;0.413956!10818-111B8;0.22839!10819-111B9;0.366631!10820-111C1;0.330138!10484-107A7;0.363469!10808-111A7;0.238479!10169-103B7;0.429155!10153-102I9;0.875961!13425-144D5;0.855593!13433-144E4;0.646849!13437-144E8;0.74608!11904-125F5;0.738357!11905-125F6;0.140564!10039-101F3;0.780632!10791-110H8;0.377064!10017-101C8;0.23182!10045-101F9;0.891463!10509-107D5;0.101802!10839-111E2;0.944846!10692-109F8;0.647926!10079-102A7;0.545423!10078-102A6;2.88726e-20!10721-110A1;1.441e-34!10569-108B2;0.0236378!10570-108B3;0.860335!10571-108B4;0.783981!10647-109A8;0.929072!10752-110D5;0.140843!10782-110G8;0.457363!10726-110A6;0.195402!10018-101C9;0.568343!10086-102B5;0.871441!10182-103D2;0.0212674!10165-103B3;0.628929!10499-107C4;0.853412!10408-106B3;0.732427!10019-101D1;0.814688!10068-101I5;0.0928461!10075-102A3;0.0564494!10077-102A5;0.774777!10727-110A7;0.481507!10775-110G1;0.219098!10412-106B7;6.70807e-05!12231-129F8;0.25988!12232-129F9;0.115712!12233-129G1;0.0445913!12234-129G2;0.220236!10414-106B9;0.230916!10170-103B8;0.0328713!10183-103D3;0.620067!10150-102I6;0.606777!10174-103C3;0.9373!10155-103A2;0.935048!10038-101F2;0.867292!10838-111E1;0.241424!10759-110E3;0.544794!10514-107E1;0.00111243!10465-106H6;0.243513!10691-109F7;0.108024!10843-111E6;0.801322!10844-111E7;0.0811956!11747-123G1;0.394649!11748-123G2;0.346554!11749-123G3;0.39378!11750-123G4;0.238617!11751-123G5;0.817994!11840-124H4;0.718731!11752-123G6;0.358013!11753-123G7;0.35148!11754-123G8;0.715607!11755-123G9;0.5661!11756-123H1;0.72896!11833-124G6;0.872967!11760-123H5;0.347527!11836-124G9;0.952621!11758-123H3;0.741593!11835-124G8;0.473151!11762-123H7;0.959559!11838-124H2;0.312507!11757-123H2;0.295039!11759-123H4;0.869318!11761-123H6;0.326757!11842-124H6;0.163664!11837-124H1;0.0594581!10568-108B1;0.585836!13230-141I8;0.0503662!13231-141I9;0.270233!10696-109G3;0.161822!10493-107B7;0.174392!10494-107B8;0.0157635!10850-111F4;0.0836787!10851-111F5;0.864239!10852-111F6;0.421991!10853-111F7;0.175849!10854-111F8;0.408891!10855-111F9;0.88676!10856-111G1;0.58947!10847-111F1;0.168454!10846-111E9;0.349694!10848-111F2;0.297968!10845-111E8;0.0966857!10857-111G2;0.148327!10858-111G3;0.55527!10156-103A3;0.305586!11901-125F2;0.973399!11902-125F3;0.00472319!11903-125F4;0.00282869!10689-109F5;0.00159515!10648-109A9;0.0534178!10784-110H1;0.307837!10744-110C6;0.3993!10772-110F7;0.0543634!10474-106I6;0.0125415!10600-108E6;1.17708e-05!10684-109E9;0.687077!12226-129F3;0.093798!12227-129F4;0.111711!10508-107D4;0.682817!10539-107G8;0.000534905!10607-108F4;0.145561!10555-107I6;0.0974591!10774-110F9;0.133752!10637-108I7;0.234486!10663-109C6;0.713073!10728-110A8;0.689221!10729-110A9;0.514173!10430-106D7;0.00974086!10730-110B1;0.0761595!10813-111B3;0.942961!10812-111B2;0.29343!10037-101F1;0.838428!10172-103C1;0.604806!10163-103B1;0.778285!10076-102A4;0.902436!10073-102A1;0.373937!10036-101E9;0.716319!10195-103E6;0.394686!10277-104E7;0.570552!10434-106E2;0.425113!10550-107I1;0.0126781!10545-107H5;0.154139!10544-107H4;0.438837!10704-109H2;0.276801!10510-107D6;0.662812!10558-107I9;0.906751!10020-101D2;0.430285!10732-110B3;0.00014774!10049-101G4;0.549656!10698-109G5;0.737271!10437-106E5;0.23441!10417-106C3;0.451777!10035-101E8;0.465536!10171-103B9;0.546737!10157-103A4;0.68595!10034-101E7;0.927971!10072-101I9;0.486433!10199-103F1;0.540019!10200-103F2;0.0194779!10697-109G4;1.9403e-29!10723-110A3;0.960408!10179-103C8;0.682252!10160-103A7;0.176588!10180-103C9;0.615718!10162-103A9;0.517903!10021-101D3;0.43039!10840-111E3;0.934847!10706-109H4;0.035056!10033-101E6;0.0282372!10032-101E5;0.809064!10490-107B4;0.358332!10439-106E7;0.356928!10022-101D4;0.795027!10176-103C5;0.000323055!10469-106I1;0.78711!10067-101I4;0.631381!10411-106B6;0.768539!10471-106I3;0.740596!10030-101E3;0.0231497!10475-106I7;0.0321991!10787-110H4;0.242104!10477-106I9;0.712925!10695-109G2;0.712635!11771-123I7;0.443901!11772-123I8;0.389983!11773-123I9;0.619988!10093-102C3;0.842253!10442-106F1;0.0109849!10442-106F1;0.0932562!10201-103F3;0.105521!10639-108I9;0.103901!11843-124H7;0.257814!11841-124H5;0.126948!10693-109F9;0.113354!10436-106E4;0.195734!10483-107A6;0.394172!10282-104F3;0.767545!10023-101D5;2.36608e-47!10066-101I3;3.73394e-41!10065-101I2;1.47339e-47!10800-110I8;1.14885e-20!10610-108F7;0.867378!10841-111E4;0.432142!10541-107H1;0.866817!10842-111E5;0.0778261!10562-108A4;0.132442!10024-101D6;0.636774!10064-101I1;0.528839!10609-108F6;0.765252!10048-101G3;0.527522!10781-110G7;1.36928e-05!10181-103D1;0.0426318!10159-103A6;0.611811!10056-101H2;0.707337!10737-110B8;0.020258!10025-101D7;0.104612!10044-101F8;0.727337!10424-106D1;0.205951!10463-106H4;0.00163013!10616-108G4;0.0647115!10486-107A9;0.515742!10062-101H8;0.0149974!10202-103F4;0.0890035!10158-103A5;1.24868e-07!10441-106E9;0.97993!10031-101E4;0.149297!10063-101H9;0.273259!10063-101H9;0.823365!11763-123H8;0.792101!11765-123I1;0.236565!11768-123I4;0.245089!10807-111A6;0.942543!10790-110H7;0.313853!10798-110I6;0.0608764!10786-110H3;0.843365!10591-108D6;0.34617!10593-108D8;0.0273134!10590-108D5;0.00867972!10026-101D8;0.421468!10096-102C6;2.53279e-07!10168-103B6;0.021515!10154-103A1;0.314663!10209-103G2;0.801564!10061-101H7;6.15301e-27!10027-101D9;5.69834e-15!10043-101F7;0.150414!10783-110G9;0.712551!10028-101E1;0.50125!10060-101H6;0.000143284!10203-103F5;1.04936e-11!10059-101H5;4.1805e-40!10047-101G2;8.07843e-38!10029-101E2;2.02407e-05!10058-101H4;9.14641e-07!10418-106C4;3.35364e-15!10492-107B6;0.143796!10694-109G1;0.764179!10797-110I5;0.670762!10057-101H3;0.194086!10100-102D1;1.9008e-29!10055-101H1;0.00346124!10204-103F6;0.0667478!10191-103E2;0.0945121!10563-108A5;8.96202e-08
|name=MEF2{A,B,C,D}
|name=MEF2{A,B,C,D
|tomtom_result=MEF2A#MA0052.1;0;1.3017e-10;6.1961e-08;1.22077e-07;10;CTATTTATAG;CTATTTATAG;+!RLM1#MA0369.1;4;1.27823e-05;0.00608439;0.00599379;10;CTATTTATAG;GAATCTATTTATAGAACT;-!AGL3#MA0001.1;0;2.76233e-05;0.0131487;0.00863528;10;CTATTTATAG;CTATTTATGG;-!squamosa#MA0082.1;4;0.000329843;0.157005;0.0618669;10;CTATTTATAG;ATTTCCATTTTTGG;-!TBP#MA0108.2;5;0.000870924;0.41456;0.115397;10;CTATTTATAG;CCCCGCCTTTTATAC;-!TBP#MA0108.2;5;0.000870924;0.41456;0.115397;10;CTATTTATAG;CCCCGCCTTTTATAC;-!FOXL1#MA0033.1;-1;0.00175203;0.833966;0.16431;8;CTATTTATAG;TATGTATA;-!br_Z2#MA0011.1;2;0.0027148;1.29224;0.231455;6;CTATTTATAG;TACTATTT;+!NHP6A#MA0345.1;6;0.00428237;2.03841;0.334676;10;CTATTTATAG;TCATTTTTATATATAGGTCAT;-!Cf2_II#MA0015.1;0;0.00722163;3.4375;0.520193;10;CTATTTATAG;GTATATATAC;+!SMP1#MA0383.1;7;0.00908963;4.32666;0.520193;10;CTATTTATAG;TGCTAATTTAATTATAGGTAA;-!RORA_2#MA0072.1;5;0.00920703;4.38255;0.520193;9;CTATTTATAG;TTGACCTACTTATA;-!SUM1#MA0398.1;1;0.0118201;5.62638;0.615844;8;CTATTTATAG;AAAATTTTT;+!HCM1#MA0317.1;0;0.0130625;6.21777;0.629799;8;CTATTTATAG;TTGTTTAT;-!HMG-I/Y#MA0045.1;6;0.0140965;6.70995;0.629799;10;CTATTTATAG;GTTTTTCCATTTGTTG;-!Vsx2#MA0180.1;0;0.0141829;6.75108;0.629799;9;CTATTTATAG;CTAATTAAA;-!NHP6B#MA0346.1;5;0.0154457;7.35217;0.629799;10;CTATTTATAG;TTTATTTATATATAATATGA;+!Pdx1#MA0132.1;0;0.0176457;8.39935;0.684222;6;CTATTTATAG;CTAATT;+!ro#MA0241.1;0;0.0191966;9.13759;0.684222;7;CTATTTATAG;CTAATTA;+!PHDP#MA0457.1;0;0.0191966;9.13759;0.684222;7;CTATTTATAG;TTAATTA;+
}}
}}

Latest revision as of 12:26, 7 September 2012

Full Name: MEF2{A,B,C,D

Motif matrix
null

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
MEF2A#MA0052.101.3017e-106.1961e-081.22077e-0710CTATTTATAGCTATTTATAG+
RLM1#MA0369.141.27823e-050.006084390.0059937910CTATTTATAGGAATCTATTTATAGAACT-
AGL3#MA0001.102.76233e-050.01314870.0086352810CTATTTATAGCTATTTATGG-
squamosa#MA0082.140.0003298430.1570050.061866910CTATTTATAGATTTCCATTTTTGG-
TBP#MA0108.250.0008709240.414560.11539710CTATTTATAGCCCCGCCTTTTATAC-
TBP#MA0108.250.0008709240.414560.11539710CTATTTATAGCCCCGCCTTTTATAC-
FOXL1#MA0033.1-10.001752030.8339660.164318CTATTTATAGTATGTATA-
br_Z2#MA0011.120.00271481.292240.2314556CTATTTATAGTACTATTT+
NHP6A#MA0345.160.004282372.038410.33467610CTATTTATAGTCATTTTTATATATAGGTCAT-
Cf2_II#MA0015.100.007221633.43750.52019310CTATTTATAGGTATATATAC+
SMP1#MA0383.170.009089634.326660.52019310CTATTTATAGTGCTAATTTAATTATAGGTAA-
RORA_2#MA0072.150.009207034.382550.5201939CTATTTATAGTTGACCTACTTATA-
SUM1#MA0398.110.01182015.626380.6158448CTATTTATAGAAAATTTTT+
HCM1#MA0317.100.01306256.217770.6297998CTATTTATAGTTGTTTAT-
HMG-I/Y#MA0045.160.01409656.709950.62979910CTATTTATAGGTTTTTCCATTTGTTG-
Vsx2#MA0180.100.01418296.751080.6297999CTATTTATAGCTAATTAAA-
NHP6B#MA0346.150.01544577.352170.62979910CTATTTATAGTTTATTTATATATAATATGA+
Pdx1#MA0132.100.01764578.399350.6842226CTATTTATAGCTAATT+
ro#MA0241.100.01919669.137590.6842227CTATTTATAGCTAATTA+
PHDP#MA0457.100.01919669.137590.6842227CTATTTATAGTTAATTA+
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