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MacroAPE 1083:Motif CNGAAT: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;176;0;0!02;44;44;44;44!03;0;0;176;0!04;176;0;0;0!05;176;0;0;0!06;0;0;0;176 |macroape_1083_sample_pvalues=11376-118A8;0.489453!11327-117E...")
 
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!10464-106H5;0.616824!10827-111C8;0.616573!10789-110H6;0.475948!10828-111C9;0.514382!10788-110H5;0.769039!10792-110H9;0.189609!10765-110E9;0.38098!10829-111D1;0.646068!10830-111D2;0.299336!10831-111D3;0.416331!10832-111D4;0.667532!10833-111D5;0.185532!10764-110E8;0.236245!10770-110F5;0.146678!10399-106A3;0.369872!10400-106A4;0.379921!10405-106A9;0.311604!10834-111D6;0.250224!10835-111D7;0.358499!10836-111D8;0.286844!10837-111D9;0.324681!10699-109G6;0.520107!10802-111A1;0.4797!10796-110I4;0.498281!10010-101C1;0.681845!10810-111A9;0.338444!10421-106C7;0.659557!10708-109H6;0.348845!12235-129G3;0.984997!12236-129G4;0.548509!12237-129G5;0.459321!10167-103B5;0.547867!10151-102I7;0.410926!10428-106D5;0.49504!10795-110I3;0.402405!10805-111A4;0.293435!10052-101G7;0.206507!10189-103D9;0.621474!10589-108D4;0.60897!10425-106D2;0.788943!10427-106D4;0.481281!10702-109G9;0.511409!10432-106D9;0.364213!10496-107C1;0.831183!10718-109I7;0.370195!10011-101C2;0.560323!10053-101G8;0.829523!10686-109F2;0.14765!10084-102B3;0.532171!10012-101C3;0.496984!10085-102B4;0.567935!10482-107A5;0.282139!10419-106C5;0.890796!10080-102A8;0.410588!10760-110E4;0.398755!10709-109H7;0.865944!10710-109H8;0.866854!10703-109H1;0.36303!10719-109I8;0.62358!10642-109A3;0.984272!10177-103C6;0.455285!10164-103B2;0.33409!10173-103C2;0.403263!10166-103B4;0.275198!10083-102B2;0.381372!10188-103D8;0.392471!10552-107I3;0.519556!10553-107I4;0.766635!10013-101C4;0.396146!10536-107G5;0.647502!10618-108G6;0.437034!10423-106C9;0.775898!10785-110H2;0.794906!12238-129G6;0.448594!12239-129G7;0.2652!12240-129G8;0.144162!10416-106C2;0.710549!10801-110I9;0.357354!10766-110F1;0.230506!10824-111C5;0.284016!10825-111C6;0.322174!10826-111C7;0.304547!10454-106G4;0.262752!10409-106B4;0.372676!10638-108I8;0.299308!10636-108I6;0.397009!10513-107D9;0.412918!10420-106C6;0.762589!10082-102B1;0.403267!10014-101C5;0.426342!10070-101I7;0.965365!10452-106G2;0.918194!10453-106G3;0.623941!10449-106F8;0.883205!10042-101F6;0.876808!10069-101I6;0.417267!10193-103E4;0.785711!10631-108I1;0.678997!10438-106E6;0.512529!10488-107B2;0.632639!10196-103E7;0.438054!10071-101I8;0.647367!10071-101I8;0.229161!10041-101F5;0.374477!10451-106G1;0.895692!10450-106F9;0.541164!10604-108F1;0.646207!10605-108F2;0.668285!10606-108F3;0.54508!10603-108E9;0.440965!10497-107C2;0.648715!10448-106F7;0.551632!10643-109A4;0.941787!10426-106D3;0.590998!10431-106D8;0.829482!10197-103E8;0.857935!10443-106F2;0.571266!10815-111B5;0.724813!10816-111B6;0.606531!10817-111B7;0.595651!10015-101C6;0.638317!10410-106B5;0.961314!10054-101G9;0.855287!10758-110E2;0.476878!10711-109H9;0.471338!10040-101F4;0.73328!10470-106I2;0.544056!10415-106C1;0.293202!10198-103E9;0.802683!10614-108G2;0.661219!10612-108F9;0.918868!10549-107H9;0.18608!10615-108G3;0.921857!10487-107B1;0.704225!10433-106E1;0.996696!10688-109F4;0.261113!10444-106F3;0.79198!10444-106F3;0.438129!10485-107A8;0.562075!10413-106B8;0.631601!10175-103C4;0.903811!10161-103A8;0.31251!12131-128D7;0.550572!10624-108H3;0.66497!10712-109I1;0.900724!10205-103F7;0.826572!10206-103F8;0.762494!10207-103F9;0.971841!10050-101G5;0.486213!10051-101G6;0.815004!10016-101C7;0.926187!10046-101G1;0.985687!10778-110G4;0.266977!10633-108I3;0.172662!10818-111B8;0.971801!10819-111B9;0.771357!10820-111C1;0.838563!10484-107A7;0.78943!10808-111A7;0.820759!10169-103B7;0.898433!10153-102I9;0.314562!13425-144D5;0.501102!13433-144E4;0.846192!13437-144E8;0.921199!11904-125F5;0.723954!11905-125F6;0.463715!10039-101F3;0.185541!10791-110H8;0.483842!10017-101C8;0.472127!10045-101F9;0.0639682!10509-107D5;0.636536!10839-111E2;0.345804!10692-109F8;0.893154!10079-102A7;0.53686!10078-102A6;0.706689!10721-110A1;0.630601!10569-108B2;0.912004!10570-108B3;0.118348!10571-108B4;0.146206!10647-109A8;0.109262!10752-110D5;0.527333!10782-110G8;0.464764!10726-110A6;0.0505593!10018-101C9;0.878094!10086-102B5;0.0524067!10182-103D2;0.979962!10165-103B3;0.433754!10499-107C4;0.346002!10408-106B3;0.271929!10019-101D1;0.622513!10068-101I5;0.862322!10075-102A3;0.429132!10077-102A5;0.927002!10727-110A7;0.442862!10775-110G1;0.969996!10412-106B7;0.715062!12231-129F8;0.852087!12232-129F9;0.261405!12233-129G1;0.262343!12234-129G2;0.205677!10414-106B9;0.154848!10170-103B8;0.417362!10183-103D3;0.486246!10150-102I6;0.418132!10174-103C3;0.494315!10155-103A2;0.428239!10038-101F2;0.468729!10838-111E1;0.458336!10759-110E3;0.8668!10514-107E1;0.759872!10465-106H6;0.687532!10691-109F7;0.958953!10843-111E6;0.269658!10844-111E7;0.435522!11747-123G1;0.32691!11748-123G2;0.980719!11749-123G3;0.902881!11750-123G4;0.883562!11751-123G5;0.311651!11840-124H4;0.71458!11752-123G6;0.66525!11753-123G7;0.947924!11754-123G8;0.58312!11755-123G9;0.860464!11756-123H1;0.675832!11833-124G6;0.32557!11760-123H5;0.868424!11836-124G9;0.943966!11758-123H3;0.455003!11835-124G8;0.198103!11762-123H7;0.330661!11838-124H2;0.452208!11757-123H2;0.179355!11759-123H4;0.129821!11761-123H6;0.315473!11842-124H6;0.662108!11837-124H1;0.219425!10568-108B1;0.177623!13230-141I8;0.764028!13231-141I9;0.350805!10696-109G3;0.429092!10493-107B7;0.819574!10494-107B8;0.498326!10850-111F4;0.43459!10851-111F5;0.649056!10852-111F6;0.901956!10853-111F7;0.195565!10854-111F8;0.50936!10855-111F9;0.428314!10856-111G1;0.814636!10847-111F1;0.321946!10846-111E9;0.255671!10848-111F2;0.969786!10845-111E8;0.544565!10857-111G2;0.0934439!10858-111G3;0.928265!10156-103A3;0.532833!11901-125F2;0.434302!11902-125F3;0.572319!11903-125F4;0.298175!10689-109F5;0.794161!10648-109A9;0.54788!10784-110H1;0.648768!10744-110C6;0.865997!10772-110F7;0.272946!10474-106I6;0.405966!10600-108E6;0.0417986!10684-109E9;0.698399!12226-129F3;0.483701!12227-129F4;0.693752!10508-107D4;0.789233!10539-107G8;0.256986!10607-108F4;0.183377!10555-107I6;0.678161!10774-110F9;0.44199!10637-108I7;0.67369!10663-109C6;0.253358!10728-110A8;0.128892!10729-110A9;0.575052!10430-106D7;0.36796!10730-110B1;0.993924!10813-111B3;0.327687!10812-111B2;0.107426!10037-101F1;0.581173!10172-103C1;0.501804!10163-103B1;0.469662!10076-102A4;0.436654!10073-102A1;0.545172!10036-101E9;0.321071!10195-103E6;0.459309!10277-104E7;0.427025!10434-106E2;0.320736!10550-107I1;0.757691!10545-107H5;0.760735!10544-107H4;0.234612!10704-109H2;0.642689!10510-107D6;0.419682!10558-107I9;0.81407!10020-101D2;0.585743!10732-110B3;0.767518!10049-101G4;0.626004!10698-109G5;0.700443!10437-106E5;0.973655!10417-106C3;0.742444!10035-101E8;0.920895!10171-103B9;0.469715!10157-103A4;0.455982!10034-101E7;0.526489!10072-101I9;0.419398!10199-103F1;0.22714!10200-103F2;0.51047!10697-109G4;0.8663!10723-110A3;0.922686!10179-103C8;0.693622!10160-103A7;0.206201!10180-103C9;0.359484!10162-103A9;0.416357!10021-101D3;0.53742!10840-111E3;0.521798!10706-109H4;0.666556!10033-101E6;0.3044!10032-101E5;0.477635!10490-107B4;0.479519!10439-106E7;0.943438!10022-101D4;0.457428!10176-103C5;0.85396!10469-106I1;0.436299!10067-101I4;0.464221!10411-106B6;0.44626!10471-106I3;0.74336!10030-101E3;0.131824!10475-106I7;0.40488!10787-110H4;0.54255!10477-106I9;0.490349!10695-109G2;0.506289!11771-123I7;0.363939!11772-123I8;0.291499!11773-123I9;0.50316!10093-102C3;0.882627!10442-106F1;0.91237!10442-106F1;0.430196!10201-103F3;0.655381!10639-108I9;0.919324!11843-124H7;0.991429!11841-124H5;0.551942!10693-109F9;0.626493!10436-106E4;0.34968!10483-107A6;0.968079!10282-104F3;0.515804!10023-101D5;0.199198!10066-101I3;0.253999!10065-101I2;0.55795!10800-110I8;0.880502!10610-108F7;0.38117!10841-111E4;0.736316!10541-107H1;0.337183!10842-111E5;0.319007!10562-108A4;0.427654!10024-101D6;0.97257!10064-101I1;0.980676!10609-108F6;0.495306!10048-101G3;0.71186!10781-110G7;0.522573!10181-103D1;0.184501!10159-103A6;0.396804!10056-101H2;0.540228!10737-110B8;0.53682!10025-101D7;0.187127!10044-101F8;0.80283!10424-106D1;0.477993!10463-106H4;0.929626!10616-108G4;0.822718!10486-107A9;0.644412!10062-101H8;0.76774!10202-103F4;0.407445!10158-103A5;0.844236!10441-106E9;0.447857!10031-101E4;0.592831!10063-101H9;0.42223!10063-101H9;0.290641!11763-123H8;0.711691!11765-123I1;0.174282!11768-123I4;0.280045!10807-111A6;0.409474!10790-110H7;0.774947!10798-110I6;0.97877!10786-110H3;0.67679!10591-108D6;0.891101!10593-108D8;0.963213!10590-108D5;0.594602!10026-101D8;0.389196!10096-102C6;0.779931!10168-103B6;0.815157!10154-103A1;0.494037!10209-103G2;0.495473!10061-101H7;0.863458!10027-101D9;0.680576!10043-101F7;0.68152!10783-110G9;0.993006!10028-101E1;0.546896!10060-101H6;0.399142!10203-103F5;0.932822!10059-101H5;0.463184!10047-101G2;0.653968!10029-101E2;0.732331!10058-101H4;0.910848!10418-106C4;0.477239!10492-107B6;0.987992!10694-109G1;0.762102!10797-110I5;0.0510579!10057-101H3;0.567401!10100-102D1;0.69112!10055-101H1;0.550672!10204-103F6;0.235055!10191-103E2;0.638217!10563-108A5;0.873134
|name=motif_CNGAAT
|name=motif_CNGAAT
|tomtom_result=LYS14#MA0325.1;1;0.0013697;0.651979;1;6;CAGAAT;CCGGAATT;+!HAL9#MA0311.1;0;0.0104792;4.98809;1;5;CAGAAT;CGGAA;+!TEC1#MA0406.1;0;0.0137644;6.55185;1;6;CAGAAT;GGGAATGT;-!ARR1#MA0274.1;2;0.0143609;6.83577;1;6;CAGAAT;ACTTGAAT;+!YBR239C#MA0420.1;2;0.0149817;7.1313;1;6;CAGAAT;ACCGGAAC;+
}}
}}

Latest revision as of 12:37, 7 September 2012

Full Name: motif_CNGAAT

Motif matrix
POACGT
01017600
0244444444
03001760
04176000
05176000
06000176

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
LYS14#MA0325.110.00136970.65197916CAGAATCCGGAATT+
HAL9#MA0311.100.01047924.9880915CAGAATCGGAA+
TEC1#MA0406.100.01376446.5518516CAGAATGGGAATGT-
ARR1#MA0274.120.01436096.8357716CAGAATACTTGAAT+
YBR239C#MA0420.120.01498177.131316CAGAATACCGGAAC+
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