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MacroAPE 1083:Motif TGCTAN: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;0;0;1360!02;0;0;1360;0!03;0;1360;0;0!04;0;0;0;1360!05;1360;0;0;0!06;340;340;340;340 |macroape_1083_sample_pvalues=11376-118A8;0.618681!1...")
 
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5;0.776131!10792-110H9;0.106117!10765-110E9;0.662781!10829-111D1;0.222999!10830-111D2;0.450082!10831-111D3;0.538323!10832-111D4;0.221319!10833-111D5;0.575693!10764-110E8;0.741068!10770-110F5;0.979839!10399-106A3;0.958401!10400-106A4;0.403003!10405-106A9;0.433136!10834-111D6;0.695124!10835-111D7;0.993768!10836-111D8;0.628706!10837-111D9;0.165806!10699-109G6;0.36397!10802-111A1;0.113149!10796-110I4;0.290518!10010-101C1;0.257002!10810-111A9;0.804291!10421-106C7;0.580681!10708-109H6;0.665172!12235-129G3;0.704509!12236-129G4;0.9979!12237-129G5;0.0781782!10167-103B5;0.944324!10151-102I7;0.0459611!10428-106D5;0.0794818!10795-110I3;0.452584!10805-111A4;0.624233!10052-101G7;0.726033!10189-103D9;0.687343!10589-108D4;0.562428!10425-106D2;0.763074!10427-106D4;0.685478!10702-109G9;0.723936!10432-106D9;0.346397!10496-107C1;0.69949!10718-109I7;0.709318!10011-101C2;0.586341!10053-101G8;0.889201!10686-109F2;0.81943!10084-102B3;0.446474!10012-101C3;0.0801662!10085-102B4;0.116501!10482-107A5;0.0286453!10419-106C5;0.845482!10080-102A8;0.790262!10760-110E4;0.84304!10709-109H7;0.392111!10710-109H8;0.58174!10703-109H1;0.803121!10719-109I8;0.660462!10642-109A3;0.845217!10177-103C6;0.959635!10164-103B2;0.0526289!10173-103C2;0.0564554!10166-103B4;0.15047!10083-102B2;0.117156!10188-103D8;0.0987727!10552-107I3;0.0667666!10553-107I4;0.994108!10013-101C4;0.64859!10536-107G5;0.400886!10618-108G6;0.597039!10423-106C9;0.737347!10785-110H2;0.524626!12238-129G6;0.54693!12239-129G7;0.995528!12240-129G8;0.508892!10416-106C2;0.653784!10801-110I9;0.562661!10766-110F1;0.181073!10824-111C5;0.0710564!10825-111C6;0.726464!10826-111C7;0.768781!10454-106G4;0.713777!10409-106B4;0.583749!10638-108I8;0.314839!10636-108I6;0.987938!10513-107D9;0.238231!10420-106C6;0.498802!10082-102B1;0.5485!10014-101C5;0.566451!10070-101I7;0.78201!10452-106G2;0.47039!10453-106G3;0.693259!10449-106F8;0.505291!10042-101F6;0.483676!10069-101I6;0.103439!10193-103E4;0.414449!10631-108I1;0.0545124!10438-106E6;0.713907!10488-107B2;0.687057!10196-103E7;0.94915!10071-101I8;0.450522!10071-101I8;0.85281!10041-101F5;0.0333246!10451-106G1;0.419112!10450-106F9;0.845157!10604-108F1;0.815075!10605-108F2;0.640399!10606-108F3;0.862742!10603-108E9;0.513309!10497-107C2;0.688939!10448-106F7;0.626032!10643-109A4;0.637492!10426-106D3;0.431127!10431-106D8;0.484481!10197-103E8;0.634059!10443-106F2;0.422373!10815-111B5;0.683398!10816-111B6;0.921015!10817-111B7;0.973321!10015-101C6;0.87226!10410-106B5;0.523242!10054-101G9;0.205233!10758-110E2;0.571955!10711-109H9;0.335177!10040-101F4;0.557124!10470-106I2;0.0866577!10415-106C1;0.551673!10198-103E9;0.690816!10614-108G2;0.960351!10612-108F9;0.636113!10549-107H9;0.834452!10615-108G3;0.939368!10487-107B1;0.398635!10433-106E1;0.204942!10688-109F4;0.757114!10444-106F3;0.959601!10444-106F3;0.364041!10485-107A8;0.335591!10413-106B8;0.766837!10175-103C4;0.659634!10161-103A8;0.258864!12131-128D7;0.255558!10624-108H3;0.9739!10712-109I1;0.315333!10205-103F7;0.180665!10206-103F8;0.999612!10207-103F9;0.838117!10050-101G5;0.800924!10051-101G6;0.767126!10016-101C7;0.671661!10046-101G1;0.648136!10778-110G4;0.865765!10633-108I3;0.731929!10818-111B8;0.855394!10819-111B9;0.396759!10820-111C1;0.333814!10484-107A7;0.351197!10808-111A7;0.726997!10169-103B7;0.655377!10153-102I9;0.0810397!13425-144D5;0.0767479!13433-144E4;0.899787!13437-144E8;0.932395!11904-125F5;0.919882!11905-125F6;0.220654!10039-101F3;0.619675!10791-110H8;0.0890748!10017-101C8;0.469812!10045-101F9;0.491924!10509-107D5;0.312518!10839-111E2;0.922075!10692-109F8;0.0524469!10079-102A7;0.914177!10078-102A6;0.889272!10721-110A1;0.828724!10569-108B2;0.730617!10570-108B3;0.928363!10571-108B4;0.918259!10647-109A8;0.836947!10752-110D5;0.86727!10782-110G8;0.0314197!10726-110A6;0.786311!10018-101C9;0.97443!10086-102B5;0.317922!10182-103D2;0.470617!10165-103B3;0.144772!10499-107C4;0.135372!10408-106B3;0.716538!10019-101D1;0.911119!10068-101I5;0.731111!10075-102A3;0.568686!10077-102A5;0.793595!10727-110A7;0.783553!10775-110G1;0.709488!10412-106B7;0.764251!12231-129F8;0.43432!12232-129F9;0.825894!12233-129G1;0.724379!12234-129G2;0.884525!10414-106B9;0.782631!10170-103B8;0.235832!10183-103D3;0.0861833!10150-102I6;0.0990532!10174-103C3;0.114164!10155-103A2;0.0634437!10038-101F2;0.0844407!10838-111E1;0.165871!10759-110E3;0.957672!10514-107E1;0.338137!10465-106H6;0.48672!10691-109F7;0.329346!10843-111E6;0.0118341!10844-111E7;0.479202!11747-123G1;0.333756!11748-123G2;0.875317!11749-123G3;0.757439!11750-123G4;0.980813!11751-123G5;0.976591!11840-124H4;0.556619!11752-123G6;0.951518!11753-123G7;0.260625!11754-123G8;0.62156!11755-123G9;0.766332!11756-123H1;0.35631!11833-124G6;0.482651!11760-123H5;0.555012!11836-124G9;0.900071!11758-123H3;0.868746!11835-124G8;0.508438!11762-123H7;0.741515!11838-124H2;0.8225!11757-123H2;0.892358!11759-123H4;0.565213!11761-123H6;0.780561!11842-124H6;0.979609!11837-124H1;0.679404!10568-108B1;0.722461!13230-141I8;0.90273!13231-141I9;0.373592!10696-109G3;0.50962!10493-107B7;0.938103!10494-107B8;0.690375!10850-111F4;0.502585!10851-111F5;0.895196!10852-111F6;0.843777!10853-111F7;0.41537!10854-111F8;0.520041!10855-111F9;0.894848!10856-111G1;0.426329!10847-111F1;0.910754!10846-111E9;0.780722!10848-111F2;0.602511!10845-111E8;0.706943!10857-111G2;0.973275!10858-111G3;0.694903!10156-103A3;0.857596!11901-125F2;0.128807!11902-125F3;0.239788!11903-125F4;0.28969!10689-109F5;0.137705!10648-109A9;0.91083!10784-110H1;0.863338!10744-110C6;0.598066!10772-110F7;0.690252!10474-106I6;0.422848!10600-108E6;0.637656!10684-109E9;0.754782!12226-129F3;0.353876!12227-129F4;0.185364!10508-107D4;0.735113!10539-107G8;0.548022!10607-108F4;0.612364!10555-107I6;0.591852!10774-110F9;0.609724!10637-108I7;0.914306!10663-109C6;0.791535!10728-110A8;0.380016!10729-110A9;0.90134!10430-106D7;0.461245!10730-110B1;0.305801!10813-111B3;0.878041!10812-111B2;0.799859!10037-101F1;0.405597!10172-103C1;0.0906836!10163-103B1;0.111704!10076-102A4;0.201681!10073-102A1;0.184499!10036-101E9;0.0978172!10195-103E6;0.137029!10277-104E7;0.089803!10434-106E2;0.546627!10550-107I1;0.394117!10545-107H5;0.901124!10544-107H4;0.2674!10704-109H2;0.610598!10510-107D6;0.832681!10558-107I9;0.346428!10020-101D2;0.996111!10732-110B3;0.168905!10049-101G4;0.527773!10698-109G5;0.934756!10437-106E5;0.532205!10417-106C3;0.767101!10035-101E8;0.867142!10171-103B9;0.118305!10157-103A4;0.139323!10034-101E7;0.121594!10072-101I9;0.132683!10199-103F1;0.0427237!10200-103F2;0.377206!10697-109G4;0.783434!10723-110A3;0.703264!10179-103C8;0.533342!10160-103A7;0.511518!10180-103C9;0.246428!10162-103A9;0.0851159!10021-101D3;0.0723889!10840-111E3;0.780166!10706-109H4;0.275732!10033-101E6;0.73038!10032-101E5;0.227709!10490-107B4;0.143538!10439-106E7;0.53297!10022-101D4;0.216303!10176-103C5;0.71166!10469-106I1;0.111176!10067-101I4;0.478678!10411-106B6;0.327645!10471-106I3;0.477288!10030-101E3;0.679628!10475-106I7;0.301692!10787-110H4;0.528098!10477-106I9;0.335793!10695-109G2;0.85151!11771-123I7;0.683576!11772-123I8;0.238271!11773-123I9;0.197947!10093-102C3;0.904442!10442-106F1;0.446514!10442-106F1;0.985294!10201-103F3;0.939944!10639-108I9;0.773111!11843-124H7;0.444669!11841-124H5;0.846216!10693-109F9;0.655552!10436-106E4;0.34263!10483-107A6;0.388165!10282-104F3;0.137868!10023-101D5;0.121649!10066-101I3;0.30435!10065-101I2;0.801174!10800-110I8;0.749291!10610-108F7;0.362286!10841-111E4;0.444639!10541-107H1;0.956808!10842-111E5;0.795915!10562-108A4;0.912386!10024-101D6;0.479105!10064-101I1;0.937773!10609-108F6;0.882348!10048-101G3;0.0866526!10781-110G7;0.913595!10181-103D1;0.821152!10159-103A6;0.313379!10056-101H2;0.251495!10737-110B8;0.181264!10025-101D7;0.741871!10044-101F8;0.954966!10424-106D1;0.908333!10463-106H4;0.685388!10616-108G4;0.798606!10486-107A9;0.083436!10062-101H8;0.53206!10202-103F4;0.456627!10158-103A5;0.451574!10441-106E9;0.412953!10031-101E4;0.595481!10063-101H9;0.107076!10063-101H9;0.0379227!11763-123H8;0.614478!11765-123I1;0.729963!11768-123I4;0.602618!10807-111A6;0.969088!10790-110H7;0.810799!10798-110I6;0.939967!10786-110H3;0.294067!10591-108D6;0.705805!10593-108D8;0.771486!10590-108D5;0.612793!10026-101D8;0.821379!10096-102C6;0.0618829!10168-103B6;0.0318966!10154-103A1;0.166051!10209-103G2;0.139947!10061-101H7;0.543841!10027-101D9;0.987634!10043-101F7;0.962448!10783-110G9;0.952338!10028-101E1;0.900051!10060-101H6;0.791754!10203-103F5;0.592644!10059-101H5;0.302157!10047-101G2;0.237579!10029-101E2;0.456358!10058-101H4;0.769421!10418-106C4;0.972574!10492-107B6;0.564872!10694-109G1;0.705326!10797-110I5;0.846249!10057-101H3;0.148015!10100-102D1;0.810712!10055-101H1;0.243039!10204-103F6;0.350674!10191-103E2;0.981777!10563-108A5;0.937023
|name=motif_TGCTAN
|name=motif_TGCTAN
|tomtom_result=odd#MA0454.1;1;0.00361439;1.72045;1;6;TGCTAA;CTGCTACTGTT;-!RTG3#MA0376.1;11;0.00414328;1.9722;1;6;TGCTAA;GACTAAGCACGTGCTAATAT;-!RFX1#MA0365.1;3;0.00565449;2.69154;1;5;TGCTAA;GGTTGCTA;+!Optix#MA0199.1;0;0.0166016;7.90236;1;5;TGCTAA;TGATA;+!NFE2L2#MA0150.1;0;0.017091;8.13534;1;6;TGCTAA;TGCTGAGTCAT;-!STP3#MA0396.1;2;0.0208152;9.90805;1;6;TGCTAA;TGCGCTAGC;-
}}
}}

Latest revision as of 12:46, 7 September 2012

Full Name: motif_TGCTAN

Motif matrix
POACGT
010001360
020013600
030136000
040001360
051360000
06340340340340

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
odd#MA0454.110.003614391.7204516TGCTAACTGCTACTGTT-
RTG3#MA0376.1110.004143281.972216TGCTAAGACTAAGCACGTGCTAATAT-
RFX1#MA0365.130.005654492.6915415TGCTAAGGTTGCTA+
Optix#MA0199.100.01660167.9023615TGCTAATGATA+
NFE2L2#MA0150.100.0170918.1353416TGCTAATGCTGAGTCAT-
STP3#MA0396.120.02081529.9080516TGCTAATGCGCTAGC-
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