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MacroAPE 1083:ATGATGGTGGC,motif457: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;30.95;3.35;6.8;8.9!2;3.9;9.05;8.05;29!3;11.55;8.3;26.25;3.9!4;43.1;0.8;2.4;3.7!5;2.3;3.15;2.6;41.95!6;14.1;3.3;29.85;2.75!7;0.95;1.45;41.4;6...")
 
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03!11681-122H7;0.097075!11216-116B1;0.0732052!12179-129A1;0.350905!12180-129A2;0.468617!12181-129A3;0.593767!12176-128I7;0.427406!12177-128I8;0.719767!12182-129A4;0.854171!12183-129A5;0.376418!12184-129A6;0.462169!10809-111A8;0.875784!10597-108E3;4.75347e-05!10717-109I6;0.00372169!10455-106G5;0.54514!10534-107G3;0.000249438!10429-106D6;4.22945e-05!10464-106H5;6.00194e-06!10827-111C8;4.04723e-05!10789-110H6;2.56006e-05!10828-111C9;0.000157986!10788-110H5;0.000671432!10792-110H9;0.000116372!10765-110E9;0.000263689!10829-111D1;0.000232586!10830-111D2;3.74334e-06!10831-111D3;8.3755e-05!10832-111D4;3.04874e-05!10833-111D5;0.000178638!10764-110E8;5.34658e-05!10770-110F5;0.00775193!10399-106A3;0.00113798!10400-106A4;9.74247e-05!10405-106A9;0.000143756!10834-111D6;0.000102079!10835-111D7;0.000729173!10836-111D8;0.000820673!10837-111D9;0.00194521!10699-109G6;0.000555021!10802-111A1;6.64801e-07!10796-110I4;9.13822e-05!10010-101C1;0.000895828!10810-111A9;8.42919e-06!10421-106C7;4.01614e-06!10708-109H6;0.00173801!12235-129G3;0.013743!12236-129G4;0.0817393!12237-129G5;0.621722!10167-103B5;0.919434!10151-102I7;0.00133629!10428-106D5;0.00043049!10795-110I3;0.711413!10805-111A4;0.000201934!10052-101G7;5.38925e-05!10189-103D9;4.62647e-07!10589-108D4;2.52692e-07!10425-106D2;0.00022906!10427-106D4;0.00152693!10702-109G9;0.000212797!10432-106D9;0.0235501!10496-107C1;9.02416e-05!10718-109I7;5.12933e-05!10011-101C2;0.000218794!10053-101G8;1.11883e-07!10686-109F2;0.668162!10084-102B3;0.611701!10012-101C3;0.0004012!10085-102B4;0.000790504!10482-107A5;0.0440937!10419-106C5;0.000211736!10080-102A8;1.59919e-05!10760-110E4;8.0533e-06!10709-109H7;0.000308912!10710-109H8;0.000324563!10703-109H1;5.90147e-05!10719-109I8;0.00186633!10642-109A3;0.0758242!10177-103C6;0.0670549!10164-103B2;0.000302511!10173-103C2;0.00121156!10166-103B4;0.357012!10083-102B2;0.0440931!10188-103D8;0.0581207!10552-107I3;0.000434488!10553-107I4;8.75269e-09!10013-101C4;0.162321!10536-107G5;2.22279e-06!10618-108G6;0.0423255!10423-106C9;0.00044945!10785-110H2;0.00113852!12238-129G6;0.000133619!12239-129G7;0.00240156!12240-129G8;0.0100933!10416-106C2;0.00273417!10801-110I9;7.03702e-06!10766-110F1;4.70345e-05!10824-111C5;0.00010695!10825-111C6;6.64982e-05!10826-111C7;0.000118735!10454-106G4;4.46469e-05!10409-106B4;2.54469e-06!10638-108I8;0.000121981!10636-108I6;0.0015872!10513-107D9;0.0135784!10420-106C6;6.09575e-07!10082-102B1;6.6175e-05!10014-101C5;0.000259009!10070-101I7;0.00010547!10452-106G2;5.25557e-06!10453-106G3;0.00138948!10449-106F8;0.000672585!10042-101F6;0.000566115!10069-101I6;0.000221873!10193-103E4;0.001279!10631-108I1;0.000603001!10438-106E6;1.60199e-05!10488-107B2;0.0104514!10196-103E7;3.70096e-05!10071-101I8;0.00148838!10071-101I8;9.30852e-05!10041-101F5;0.0491723!10451-106G1;1.15092e-06!10450-106F9;0.000754095!10604-108F1;0.00243613!10605-108F2;0.143114!10606-108F3;0.0807043!10603-108E9;0.110374!10497-107C2;0.0876349!10448-106F7;0.000526471!10643-109A4;0.00119933!10426-106D3;0.0148682!10431-106D8;0.227108!10197-103E8;0.0341289!10443-106F2;9.20418e-07!10815-111B5;0.0308201!10816-111B6;2.6712e-07!10817-111B7;1.15147e-06!10015-101C6;1.56312e-07!10410-106B5;3.15209e-07!10054-101G9;0.000571151!10758-110E2;7.3934e-05!10711-109H9;0.00537774!10040-101F4;0.00418465!10470-106I2;0.00415992!10415-106C1;0.0440478!10198-103E9;0.0410244!10614-108G2;4.26611e-06!10612-108F9;0.0553812!10549-107H9;0.000454005!10615-108G3;8.79975e-06!10487-107B1;0.0069211!10433-106E1;0.00149408!10688-109F4;0.0519649!10444-106F3;0.0254032!10444-106F3;0.160058!10485-107A8;0.106239!10413-106B8;0.0107583!10175-103C4;0.0380603!10161-103A8;0.000480209!12131-128D7;0.000117655!10624-108H3;0.000193908!10712-109I1;0.531737!10205-103F7;0.000193668!10206-103F8;7.48937e-06!10207-103F9;0.000327838!10050-101G5;6.13531e-06!10051-101G6;0.0013798!10016-101C7;0.0412252!10046-101G1;0.00336371!10778-110G4;0.0020246!10633-108I3;0.00109806!10818-111B8;0.0198551!10819-111B9;2.3667e-06!10820-111C1;1.10194e-06!10484-107A7;1.99315e-06!10808-111A7;0.00584933!10169-103B7;8.90408e-06!10153-102I9;0.00275878!13425-144D5;0.00019398!13433-144E4;0.0648821!13437-144E8;0.023793!11904-125F5;0.0201001!11905-125F6;0.831549!10039-101F3;0.403598!10791-110H8;0.00258425!10017-101C8;9.34106e-05!10045-101F9;0.00462064!10509-107D5;0.000948027!10839-111E2;9.69688e-07!10692-109F8;0.0179936!10079-102A7;0.834601!10078-102A6;0.000167729!10721-110A1;0.00801109!10569-108B2;2.30136e-06!10570-108B3;0.0257639!10571-108B4;0.338885!10647-109A8;0.0631748!10752-110D5;0.769378!10782-110G8;0.00044536!10726-110A6;0.320909!10018-101C9;0.261021!10086-102B5;0.663207!10182-103D2;0.0342384!10165-103B3;1.49824e-05!10499-107C4;4.16516e-05!10408-106B3;1.70681e-05!10019-101D1;0.253634!10068-101I5;1.13899e-06!10075-102A3;0.000139024!10077-102A5;3.63519e-06!10727-110A7;2.21924e-05!10775-110G1;6.0475e-05!10412-106B7;3.72109e-05!12231-129F8;0.00688766!12232-129F9;0.0255343!12233-129G1;0.00195735!12234-129G2;0.0155698!10414-106B9;0.191148!10170-103B8;0.00189715!10183-103D3;0.0111221!10150-102I6;0.00337463!10174-103C3;0.000738354!10155-103A2;3.21987e-06!10038-101F2;1.04813e-05!10838-111E1;1.49647e-05!10759-110E3;0.0182309!10514-107E1;0.00713762!10465-106H6;0.0605264!10691-109F7;0.0530431!10843-111E6;0.961864!10844-111E7;0.00126832!11747-123G1;0.0511602!11748-123G2;0.638859!11749-123G3;0.217159!11750-123G4;0.260127!11751-123G5;0.0801946!11840-124H4;0.0578149!11752-123G6;0.418634!11753-123G7;0.14874!11754-123G8;0.0853398!11755-123G9;0.106744!11756-123H1;0.292696!11833-124G6;0.010862!11760-123H5;0.0736222!11836-124G9;0.00396242!11758-123H3;0.0257122!11835-124G8;0.00119748!11762-123H7;0.000307198!11838-124H2;0.00164918!11757-123H2;3.12186e-05!11759-123H4;0.00224361!11761-123H6;0.107427!11842-124H6;2.58907e-05!11837-124H1;0.00119584!10568-108B1;0.000100148!13230-141I8;0.876064!13231-141I9;0.0844186!10696-109G3;0.113585!10493-107B7;0.0273263!10494-107B8;0.936805!10850-111F4;0.402721!10851-111F5;0.11659!10852-111F6;0.125027!10853-111F7;0.335309!10854-111F8;0.000395799!10855-111F9;0.00322738!10856-111G1;0.802925!10847-111F1;0.379813!10846-111E9;0.822247!10848-111F2;0.0434785!10845-111E8;0.00317324!10857-111G2;4.25515e-05!10858-111G3;7.57431e-05!10156-103A3;0.108966!11901-125F2;0.000972384!11902-125F3;0.0503307!11903-125F4;0.0329953!10689-109F5;0.0470354!10648-109A9;0.386134!10784-110H1;0.114042!10744-110C6;0.033738!10772-110F7;0.00405601!10474-106I6;0.00423124!10600-108E6;8.42223e-05!10684-109E9;0.245673!12226-129F3;0.237619!12227-129F4;0.336714!10508-107D4;0.0170201!10539-107G8;6.3023e-05!10607-108F4;0.0191562!10555-107I6;0.00342326!10774-110F9;0.00421694!10637-108I7;9.82673e-05!10663-109C6;0.181205!10728-110A8;0.030397!10729-110A9;0.0242885!10430-106D7;0.00521997!10730-110B1;7.94389e-05!10813-111B3;0.000298695!10812-111B2;0.0798129!10037-101F1;0.197226!10172-103C1;0.000943717!10163-103B1;0.0158307!10076-102A4;0.000342775!10073-102A1;0.00251793!10036-101E9;0.165367!10195-103E6;0.00173269!10277-104E7;0.00145832!10434-106E2;0.0051729!10550-107I1;0.00118675!10545-107H5;0.000349424!10544-107H4;0.00491873!10704-109H2;0.0147431!10510-107D6;0.397996!10558-107I9;0.744027!10020-101D2;0.912191!10732-110B3;8.2942e-06!10049-101G4;0.605527!10698-109G5;0.179577!10437-106E5;0.000848574!10417-106C3;0.172086!10035-101E8;0.348251!10171-103B9;0.00176651!10157-103A4;0.00593241!10034-101E7;0.000830977!10072-101I9;0.00149296!10199-103F1;0.121514!10200-103F2;0.204038!10697-109G4;2.06192e-07!10723-110A3;0.0261494!10179-103C8;0.400027!10160-103A7;0.102504!10180-103C9;0.185852!10162-103A9;0.581437!10021-101D3;0.133313!10840-111E3;0.000541777!10706-109H4;0.0242971!10033-101E6;0.53307!10032-101E5;0.000592643!10490-107B4;0.00283552!10439-106E7;0.000166311!10022-101D4;0.0426477!10176-103C5;7.79097e-06!10469-106I1;0.00631788!10067-101I4;0.326509!10411-106B6;0.000781122!10471-106I3;0.715575!10030-101E3;0.258134!10475-106I7;5.93612e-05!10787-110H4;4.05999e-05!10477-106I9;2.92739e-06!10695-109G2;0.305808!11771-123I7;0.00354403!11772-123I8;0.0837524!11773-123I9;0.107552!10093-102C3;0.218316!10442-106F1;0.0166851!10442-106F1;0.0095596!10201-103F3;0.0272731!10639-108I9;0.000289782!11843-124H7;0.448872!11841-124H5;0.628656!10693-109F9;0.137838!10436-106E4;0.000135204!10483-107A6;0.000270197!10282-104F3;1.20821e-05!10023-101D5;0.317534!10066-101I3;0.0561421!10065-101I2;0.00152418!10800-110I8;0.00010148!10610-108F7;0.023244!10841-111E4;0.0568521!10541-107H1;1.26929e-05!10842-111E5;0.00162375!10562-108A4;0.00254079!10024-101D6;0.336483!10064-101I1;0.00110667!10609-108F6;0.00534568!10048-101G3;0.0624355!10781-110G7;6.94168e-05!10181-103D1;0.0116954!10159-103A6;4.25693e-06!10056-101H2;4.43483e-06!10737-110B8;0.000200128!10025-101D7;0.0210098!10044-101F8;0.000490701!10424-106D1;8.02763e-05!10463-106H4;3.23521e-05!10616-108G4;0.00356967!10486-107A9;0.143703!10062-101H8;3.30019e-08!10202-103F4;0.00303501!10158-103A5;0.00643103!10441-106E9;1.02046e-05!10031-101E4;0.334286!10063-101H9;0.00168067!10063-101H9;0.0899413!11763-123H8;6.09845e-05!11765-123I1;0.0924701!11768-123I4;0.00715897!10807-111A6;0.0421571!10790-110H7;0.00199288!10798-110I6;0.0004015!10786-110H3;0.0800474!10591-108D6;0.000278117!10593-108D8;2.65098e-05!10590-108D5;0.00209575!10026-101D8;5.14802e-05!10096-102C6;2.82491e-05!10168-103B6;0.923014!10154-103A1;0.000191646!10209-103G2;0.000125144!10061-101H7;2.60377e-06!10027-101D9;0.000205513!10043-101F7;0.913763!10783-110G9;0.000407774!10028-101E1;0.085946!10060-101H6;0.0224159!10203-103F5;0.00901673!10059-101H5;1.14717e-05!10047-101G2;0.000306798!10029-101E2;3.97019e-05!10058-101H4;1.01824e-06!10418-106C4;3.8514e-05!10492-107B6;0.262357!10694-109G1;0.00165123!10797-110I5;0.0432725!10057-101H3;0.000520601!10100-102D1;0.000256684!10055-101H1;2.52781e-05!10204-103F6;6.66676e-05!10191-103E2;4.35218e-06!10563-108A5;1.26068e-07
|name=ATGATGGTGGC,motif457,CNhs12843,T:50.0(1.78%),B:127.6(0.17%),P:1e-32
|name=ATGATGGTGGC,motif457,CNhs12843,T:50.0(1.78%),B:127.6(0.17%),P:1e-32
|tomtom_result=YY1#MA0095.1;-2;0.00210485;1.00191;1;6;ATGATGGTGGC;GATGGC;-!Gata1#MA0035.1;-1;0.00458017;2.18016;1;6;ATGATGGTGGC;GGATGG;+!YER130C#MA0423.1;-2;0.00473984;2.25617;1;9;ATGATGGTGGC;AATAGGGGT;-!Lag1#MA0193.1;-3;0.00575987;2.7417;1;7;ATGATGGTGGC;TTGGTAG;-!RPN4#MA0373.1;-5;0.00674931;3.21267;1;6;ATGATGGTGGC;GGTGGCG;+!En1#MA0027.1;-1;0.00887092;4.22256;1;10;ATGATGGTGGC;AAGTAGTGCCC;+!Pax4#MA0068.1;11;0.00909667;4.33001;1;11;ATGATGGTGGC;GGGGGGGGAGTGGAGTATTGGAAATTTTTC;-!FZF1#MA0298.1;-1;0.0117286;5.58282;1;6;ATGATGGTGGC;TGATAG;-!YGR067C#MA0425.1;1;0.0151224;7.19827;1;11;ATGATGGTGGC;TGAAAAAGTGGGGT;-!GATA3#MA0037.1;-1;0.0209862;9.98942;1;6;ATGATGGTGGC;AGATAG;+
}}
}}

Latest revision as of 12:54, 7 September 2012

Full Name: ATGATGGTGGC,motif457,CNhs12843,T:50.0(1.78%),B:127.6(0.17%),P:1e-32

Motif matrix
POACGT
130.953.356.88.9
23.99.058.0529
311.558.326.253.9
443.10.82.43.7
52.33.152.641.95
614.13.329.852.75
70.951.4541.46.2
810.957.5511.120.45
92.950.543.453.1
102.252.4538.66.7
1110.428.13.557.95

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
YY1#MA0095.1-20.002104851.0019116ATGATGGTGGCGATGGC-
Gata1#MA0035.1-10.004580172.1801616ATGATGGTGGCGGATGG+
YER130C#MA0423.1-20.004739842.2561719ATGATGGTGGCAATAGGGGT-
Lag1#MA0193.1-30.005759872.741717ATGATGGTGGCTTGGTAG-
RPN4#MA0373.1-50.006749313.2126716ATGATGGTGGCGGTGGCG+
En1#MA0027.1-10.008870924.22256110ATGATGGTGGCAAGTAGTGCCC+
Pax4#MA0068.1110.009096674.33001111ATGATGGTGGCGGGGGGGGAGTGGAGTATTGGAAATTTTTC-
FZF1#MA0298.1-10.01172865.5828216ATGATGGTGGCTGATAG-
YGR067C#MA0425.110.01512247.19827111ATGATGGTGGCTGAAAAAGTGGGGT-
GATA3#MA0037.1-10.02098629.9894216ATGATGGTGGCAGATAG+
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MacroAPE_1083:ATGATGGTGGC,motif457&oldid=2133813"