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MacroAPE 1083:CNhs10734 bu f2: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;315.7390292867318;880.2008568040275;886.7426222340772;406.61301777696855!2;112.65469649536888;743.0785453271513;654.9339077625456;978.628376...")
 
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6735!10429-106D6;0.308189!10464-106H5;0.499975!10827-111C8;0.446171!10789-110H6;0.98751!10828-111C9;0.233047!10788-110H5;0.875129!10792-110H9;0.189261!10765-110E9;0.855223!10829-111D1;0.407393!10830-111D2;0.72369!10831-111D3;0.530972!10832-111D4;0.546296!10833-111D5;0.406281!10764-110E8;0.27759!10770-110F5;0.157786!10399-106A3;0.83392!10400-106A4;0.160139!10405-106A9;0.181184!10834-111D6;0.154332!10835-111D7;0.665401!10836-111D8;0.0480828!10837-111D9;0.259709!10699-109G6;0.404159!10802-111A1;0.2199!10796-110I4;0.286892!10010-101C1;0.0571654!10810-111A9;0.231254!10421-106C7;0.164355!10708-109H6;0.231423!12235-129G3;0.00379752!12236-129G4;0.125138!12237-129G5;0.910863!10167-103B5;0.298118!10151-102I7;2.64025e-05!10428-106D5;8.56897e-05!10795-110I3;0.0101791!10805-111A4;0.141555!10052-101G7;0.191143!10189-103D9;0.0727383!10589-108D4;0.00296971!10425-106D2;0.671693!10427-106D4;0.295347!10702-109G9;0.317806!10432-106D9;0.877182!10496-107C1;0.00434859!10718-109I7;0.00812151!10011-101C2;0.308091!10053-101G8;0.0546299!10686-109F2;0.0690747!10084-102B3;0.00661301!10012-101C3;3.82658e-06!10085-102B4;8.59753e-06!10482-107A5;0.000225791!10419-106C5;0.114914!10080-102A8;0.0898555!10760-110E4;0.104848!10709-109H7;0.0445543!10710-109H8;0.00202512!10703-109H1;0.0198256!10719-109I8;0.538281!10642-109A3;0.623294!10177-103C6;0.548077!10164-103B2;5.26278e-05!10173-103C2;3.75757e-05!10166-103B4;0.000502571!10083-102B2;0.000637181!10188-103D8;5.11088e-06!10552-107I3;2.03679e-05!10553-107I4;0.0647654!10013-101C4;0.0134553!10536-107G5;0.0341135!10618-108G6;0.00400077!10423-106C9;0.0499246!10785-110H2;0.0306159!12238-129G6;0.0735224!12239-129G7;0.872424!12240-129G8;0.974635!10416-106C2;0.89398!10801-110I9;0.635875!10766-110F1;0.246651!10824-111C5;0.469261!10825-111C6;0.0143682!10826-111C7;0.0176348!10454-106G4;0.0121749!10409-106B4;0.0333845!10638-108I8;0.161646!10636-108I6;0.0161587!10513-107D9;0.000256247!10420-106C6;0.11549!10082-102B1;0.231768!10014-101C5;0.00456113!10070-101I7;0.0375554!10452-106G2;0.0136579!10453-106G3;0.0817318!10449-106F8;0.277392!10042-101F6;0.330446!10069-101I6;0.000136578!10193-103E4;0.118374!10631-108I1;3.22466e-06!10438-106E6;0.522245!10488-107B2;0.141862!10196-103E7;0.0253542!10071-101I8;0.0108041!10071-101I8;0.00925618!10041-101F5;0.000516645!10451-106G1;0.0309063!10450-106F9;0.0152106!10604-108F1;0.134807!10605-108F2;0.120067!10606-108F3;0.0612542!10603-108E9;0.0771234!10497-107C2;0.166993!10448-106F7;0.00875763!10643-109A4;0.0361138!10426-106D3;0.124653!10431-106D8;0.00178787!10197-103E8;0.00285752!10443-106F2;0.0342212!10815-111B5;0.000904248!10816-111B6;0.0146726!10817-111B7;0.0121331!10015-101C6;0.0150614!10410-106B5;0.149169!10054-101G9;0.165154!10758-110E2;0.0064717!10711-109H9;0.0127224!10040-101F4;0.0107558!10470-106I2;3.11252e-05!10415-106C1;0.0341337!10198-103E9;0.00622772!10614-108G2;0.0260015!10612-108F9;0.108164!10549-107H9;0.0198415!10615-108G3;0.0659206!10487-107B1;0.610026!10433-106E1;0.0121231!10688-109F4;0.0512103!10444-106F3;0.0157031!10444-106F3;0.131845!10485-107A8;0.110644!10413-106B8;0.0158709!10175-103C4;0.0636655!10161-103A8;1.20859e-05!12131-128D7;0.000166966!10624-108H3;0.265674!10712-109I1;0.130702!10205-103F7;0.568865!10206-103F8;0.0956247!10207-103F9;0.128647!10050-101G5;0.721828!10051-101G6;0.416067!10016-101C7;0.142198!10046-101G1;0.250855!10778-110G4;0.201176!10633-108I3;0.705435!10818-111B8;0.21904!10819-111B9;0.013167!10820-111C1;0.0116524!10484-107A7;0.0111643!10808-111A7;0.0769324!10169-103B7;0.37266!10153-102I9;3.04046e-05!13425-144D5;8.61438e-05!13433-144E4;0.359234!13437-144E8;0.352492!11904-125F5;0.391228!11905-125F6;0.177606!10039-101F3;0.0391016!10791-110H8;2.83966e-05!10017-101C8;0.0301511!10045-101F9;0.0586449!10509-107D5;0.0438854!10839-111E2;0.0777483!10692-109F8;0.466169!10079-102A7;0.00066972!10078-102A6;0.0527507!10721-110A1;0.211651!10569-108B2;0.183294!10570-108B3;0.0813601!10571-108B4;0.132339!10647-109A8;0.0893163!10752-110D5;0.0489151!10782-110G8;0.0851637!10726-110A6;0.253278!10018-101C9;0.0618721!10086-102B5;0.0904232!10182-103D2;0.148291!10165-103B3;2.1089e-05!10499-107C4;3.71712e-05!10408-106B3;0.0269858!10019-101D1;0.150237!10068-101I5;0.172456!10075-102A3;0.162772!10077-102A5;0.0707792!10727-110A7;0.00233774!10775-110G1;0.530975!10412-106B7;0.459439!12231-129F8;0.009709!12232-129F9;0.650245!12233-129G1;0.944079!12234-129G2;0.88916!10414-106B9;0.469472!10170-103B8;0.131331!10183-103D3;1.96634e-05!10150-102I6;1.1782e-05!10174-103C3;1.82938e-05!10155-103A2;0.000345914!10038-101F2;0.000222856!10838-111E1;0.000167013!10759-110E3;0.0813142!10514-107E1;0.17544!10465-106H6;0.0252157!10691-109F7;0.205997!10843-111E6;0.0915479!10844-111E7;0.515463!11747-123G1;0.898274!11748-123G2;0.645658!11749-123G3;0.156042!11750-123G4;0.878394!11751-123G5;0.754109!11840-124H4;0.86835!11752-123G6;0.592749!11753-123G7;0.608201!11754-123G8;0.938134!11755-123G9;0.964743!11756-123H1;0.153859!11833-124G6;0.282107!11760-123H5;0.0851557!11836-124G9;0.230455!11758-123H3;0.525945!11835-124G8;0.837226!11762-123H7;0.80364!11838-124H2;0.674982!11757-123H2;0.829336!11759-123H4;0.907677!11761-123H6;0.156983!11842-124H6;0.933955!11837-124H1;0.795287!10568-108B1;0.996327!13230-141I8;0.0732561!13231-141I9;0.645388!10696-109G3;0.756875!10493-107B7;0.501695!10494-107B8;0.00378686!10850-111F4;0.00819312!10851-111F5;0.000121766!10852-111F6;0.0163156!10853-111F7;0.0114143!10854-111F8;4.32736e-05!10855-111F9;0.0365586!10856-111G1;0.808187!10847-111F1;0.00733148!10846-111E9;0.0121277!10848-111F2;0.000591849!10845-111E8;0.00215101!10857-111G2;0.0107843!10858-111G3;0.00880333!10156-103A3;0.000269425!11901-125F2;2.63914e-05!11902-125F3;0.296804!11903-125F4;0.328238!10689-109F5;0.394369!10648-109A9;0.0017937!10784-110H1;0.00394265!10744-110C6;0.00284996!10772-110F7;0.928437!10474-106I6;0.329898!10600-108E6;0.908994!10684-109E9;0.00827557!12226-129F3;0.0535002!12227-129F4;0.000358585!10508-107D4;0.921847!10539-107G8;0.933493!10607-108F4;0.887014!10555-107I6;0.48675!10774-110F9;0.849172!10637-108I7;0.512929!10663-109C6;0.705514!10728-110A8;0.456089!10729-110A9;0.463808!10430-106D7;0.772881!10730-110B1;0.192638!10813-111B3;0.390273!10812-111B2;0.983633!10037-101F1;0.611434!10172-103C1;2.02635e-05!10163-103B1;6.80597e-05!10076-102A4;7.57401e-05!10073-102A1;4.43461e-06!10036-101E9;0.00433948!10195-103E6;1.18255e-05!10277-104E7;1.99027e-05!10434-106E2;0.000128064!10550-107I1;0.027021!10545-107H5;0.0335399!10544-107H4;0.00563934!10704-109H2;0.00107317!10510-107D6;0.0646778!10558-107I9;0.0847842!10020-101D2;0.12518!10732-110B3;0.0328114!10049-101G4;0.00537239!10698-109G5;0.00403579!10437-106E5;0.0236081!10417-106C3;0.172514!10035-101E8;0.00077169!10171-103B9;2.38748e-05!10157-103A4;1.27046e-05!10034-101E7;3.77074e-05!10072-101I9;2.26288e-05!10199-103F1;0.00327641!10200-103F2;0.0128049!10697-109G4;0.0755138!10723-110A3;0.292722!10179-103C8;0.0217401!10160-103A7;0.000242971!10180-103C9;2.55556e-05!10162-103A9;0.0120592!10021-101D3;0.00721937!10840-111E3;0.20359!10706-109H4;0.385117!10033-101E6;0.00286378!10032-101E5;6.11201e-06!10490-107B4;1.35728e-05!10439-106E7;0.00688569!10022-101D4;0.067709!10176-103C5;0.0194479!10469-106I1;6.17542e-05!10067-101I4;0.0621328!10411-106B6;0.00208406!10471-106I3;0.00120152!10030-101E3;0.0246213!10475-106I7;0.00205769!10787-110H4;0.289288!10477-106I9;0.0422988!10695-109G2;0.258456!11771-123I7;0.970587!11772-123I8;0.00455598!11773-123I9;0.0127586!10093-102C3;0.169436!10442-106F1;0.00951847!10442-106F1;0.00765599!10201-103F3;0.00746271!10639-108I9;0.0042443!11843-124H7;0.00115094!11841-124H5;0.0094423!10693-109F9;0.00563359!10436-106E4;0.0508573!10483-107A6;0.0176571!10282-104F3;0.0233485!10023-101D5;0.333685!10066-101I3;0.380036!10065-101I2;0.0792341!10800-110I8;0.0776633!10610-108F7;0.346988!10841-111E4;0.526337!10541-107H1;0.257922!10842-111E5;0.0763429!10562-108A4;0.565899!10024-101D6;0.72443!10064-101I1;0.020846!10609-108F6;0.024956!10048-101G3;0.513663!10781-110G7;0.0261352!10181-103D1;0.837578!10159-103A6;0.000237919!10056-101H2;0.000857659!10737-110B8;0.000838991!10025-101D7;0.237294!10044-101F8;0.0254246!10424-106D1;0.0751329!10463-106H4;0.278743!10616-108G4;0.0134266!10486-107A9;0.00255669!10062-101H8;0.031458!10202-103F4;0.049911!10158-103A5;0.0127369!10441-106E9;0.000934576!10031-101E4;0.124803!10063-101H9;6.72392e-06!10063-101H9;0.00339222!11763-123H8;0.00923942!11765-123I1;0.497898!11768-123I4;0.333807!10807-111A6;0.523984!10790-110H7;0.260319!10798-110I6;0.509372!10786-110H3;0.103001!10591-108D6;0.152216!10593-108D8;0.155911!10590-108D5;0.151929!10026-101D8;0.0822514!10096-102C6;0.210318!10168-103B6;0.954565!10154-103A1;3.66516e-05!10209-103G2;9.17237e-05!10061-101H7;0.130557!10027-101D9;0.0720888!10043-101F7;0.15363!10783-110G9;0.0115517!10028-101E1;0.00356609!10060-101H6;0.221034!10203-103F5;0.042914!10059-101H5;0.174914!10047-101G2;0.200668!10029-101E2;0.0471597!10058-101H4;0.210021!10418-106C4;0.075588!10492-107B6;0.00460966!10694-109G1;0.00177923!10797-110I5;0.42745!10057-101H3;0.0394241!10100-102D1;0.187819!10055-101H1;0.0206442!10204-103F6;0.0304217!10191-103E2;0.146652!10563-108A5;0.0295074
|name=CNhs10734_bu_f2
|name=CNhs10734_bu_f2
|tomtom_result=SOK2#MA0385.1;-1;0.000106729;0.0508029;0.101606;10;GTGCCTGCTGC;TGCCTGCAGGT;-!PHD1#MA0355.1;-2;0.000814345;0.387628;0.387628;9;GTGCCTGCTGC;ACCTGCAGCA;+!Tal1::Gata1#MA0140.1;-4;0.0143412;6.82642;1;7;GTGCCTGCTGC;CTGGTGGGGACAGATAAG;+!DOT6#MA0351.1;-2;0.0158581;7.54845;1;9;GTGCCTGCTGC;TTCTGCACCTCATCGCATCCT;+!STP2#MA0395.1;1;0.01674;7.96822;1;11;GTGCCTGCTGC;TCGTCGTGCGGCGCCGATCA;-!Myf#MA0055.1;-4;0.0189451;9.01786;1;7;GTGCCTGCTGC;CAGCAGCTGCTG;-
}}
}}

Latest revision as of 13:11, 7 September 2012

Full Name: CNhs10734_bu_f2

Motif matrix
POACGT
1315.7390292867318880.2008568040275886.7426222340772406.61301777696855
2112.65469649536888743.0785453271513654.9339077625456978.6283765167398
3310.36832545326985555.88672673776953.4809649820625669.5595089287125
457.1345940097139361063.271140662125329.495023450704251039.3947679792623
52.43448033882320172482.5505368182182.1552544723827092.155254472382709
62.2498602274323040.00.02487.045665874374
70.00.02489.29552610180640.0
823.343052196253491891.766715034700445.65668219755926528.5290766732918
9598.8337457944638260.0166209832691538.51767906961411091.927480254459
10351.02663087750284499.59531377342351216.1540995307953422.5194819200816
11625.46600931812111047.9292172609532420.26633411578064395.63396540694936

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
SOK2#MA0385.1-10.0001067290.05080290.10160610GTGCCTGCTGCTGCCTGCAGGT-
PHD1#MA0355.1-20.0008143450.3876280.3876289GTGCCTGCTGCACCTGCAGCA+
Tal1::Gata1#MA0140.1-40.01434126.8264217GTGCCTGCTGCCTGGTGGGGACAGATAAG+
DOT6#MA0351.1-20.01585817.5484519GTGCCTGCTGCTTCTGCACCTCATCGCATCCT+
STP2#MA0395.110.016747.96822111GTGCCTGCTGCTCGTCGTGCGGCGCCGATCA-
Myf#MA0055.1-40.01894519.0178617GTGCCTGCTGCCAGCAGCTGCTG-
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