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MacroAPE 1083:CNhs12498 bl f2: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;78.96042116679187;85.19109882223165;105.11511231698505;26.803432114847464!2;31.829082435867722;124.69049831357502;13.392324108255767;126.158...")
 
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638!10717-109I6;0.000753037!10455-106G5;0.0583531!10534-107G3;0.546495!10429-106D6;0.0906079!10464-106H5;0.0459838!10827-111C8;0.0698599!10789-110H6;0.874359!10828-111C9;0.946419!10788-110H5;0.90472!10792-110H9;0.289121!10765-110E9;0.947709!10829-111D1;0.532025!10830-111D2;0.545419!10831-111D3;0.362481!10832-111D4;0.585307!10833-111D5;0.352968!10764-110E8;0.418523!10770-110F5;0.277009!10399-106A3;0.760175!10400-106A4;0.500216!10405-106A9;0.401779!10834-111D6;0.403664!10835-111D7;0.457361!10836-111D8;0.0495599!10837-111D9;0.0457018!10699-109G6;0.550724!10802-111A1;0.159174!10796-110I4;0.0579245!10010-101C1;0.0174057!10810-111A9;0.0806413!10421-106C7;0.00922171!10708-109H6;0.238324!12235-129G3;0.00291708!12236-129G4;0.294791!12237-129G5;0.499149!10167-103B5;0.118181!10151-102I7;0.647576!10428-106D5;0.573676!10795-110I3;7.44315e-05!10805-111A4;0.159966!10052-101G7;0.0011148!10189-103D9;0.0243261!10589-108D4;0.0121145!10425-106D2;0.0482086!10427-106D4;0.0267232!10702-109G9;0.184333!10432-106D9;0.0882881!10496-107C1;0.0659903!10718-109I7;0.201862!10011-101C2;0.533562!10053-101G8;0.0518982!10686-109F2;0.0225347!10084-102B3;0.586217!10012-101C3;0.436484!10085-102B4;0.372237!10482-107A5;0.824944!10419-106C5;7.33957e-05!10080-102A8;0.000674958!10760-110E4;0.369382!10709-109H7;0.140172!10710-109H8;0.188498!10703-109H1;0.0518659!10719-109I8;0.0738215!10642-109A3;0.00292021!10177-103C6;0.00207569!10164-103B2;0.368858!10173-103C2;0.486776!10166-103B4;0.887961!10083-102B2;0.956454!10188-103D8;0.772049!10552-107I3;0.488945!10553-107I4;0.0397574!10013-101C4;7.30949e-05!10536-107G5;0.0235096!10618-108G6;2.44119e-06!10423-106C9;0.000683426!10785-110H2;0.00998838!12238-129G6;0.0031161!12239-129G7;0.324073!12240-129G8;0.170248!10416-106C2;0.0477462!10801-110I9;0.361031!10766-110F1;0.539416!10824-111C5;0.375193!10825-111C6;0.192114!10826-111C7;0.202743!10454-106G4;0.154708!10409-106B4;0.158956!10638-108I8;0.272103!10636-108I6;0.0687081!10513-107D9;0.029328!10420-106C6;0.00334711!10082-102B1;0.00198008!10014-101C5;0.058554!10070-101I7;0.0372506!10452-106G2;0.0328566!10453-106G3;0.0152662!10449-106F8;0.0431547!10042-101F6;0.0493736!10069-101I6;0.206482!10193-103E4;0.0654248!10631-108I1;0.389641!10438-106E6;0.285783!10488-107B2;0.0140605!10196-103E7;0.008334!10071-101I8;0.258266!10071-101I8;0.0618004!10041-101F5;0.583192!10451-106G1;0.0166369!10450-106F9;5.0299e-05!10604-108F1;0.000210903!10605-108F2;0.0112087!10606-108F3;0.0232566!10603-108E9;0.0055014!10497-107C2;0.00451474!10448-106F7;0.0252084!10643-109A4;0.00203657!10426-106D3;0.0143025!10431-106D8;0.0986243!10197-103E8;0.00483842!10443-106F2;0.0170174!10815-111B5;0.429941!10816-111B6;0.0274053!10817-111B7;0.0111617!10015-101C6;0.0175642!10410-106B5;0.0233031!10054-101G9;0.00175588!10758-110E2;0.0430822!10711-109H9;0.0125243!10040-101F4;0.0213659!10470-106I2;0.68082!10415-106C1;0.0107404!10198-103E9;0.504528!10614-108G2;0.0145438!10612-108F9;1.7215e-06!10549-107H9;0.00558792!10615-108G3;0.000507141!10487-107B1;0.0100205!10433-106E1;0.0486121!10688-109F4;0.00102916!10444-106F3;0.00808084!10444-106F3;0.0184909!10485-107A8;0.0220493!10413-106B8;0.00105976!10175-103C4;0.00366123!10161-103A8;0.337776!12131-128D7;0.247604!10624-108H3;0.0350732!10712-109I1;0.258699!10205-103F7;0.251169!10206-103F8;0.0716241!10207-103F9;0.0903987!10050-101G5;0.608897!10051-101G6;0.050219!10016-101C7;0.0449451!10046-101G1;0.155962!10778-110G4;0.200566!10633-108I3;0.183281!10818-111B8;3.26774e-05!10819-111B9;0.0111105!10820-111C1;0.0151109!10484-107A7;0.0106187!10808-111A7;1.81674e-06!10169-103B7;0.25964!10153-102I9;0.474888!13425-144D5;0.46608!13433-144E4;0.00715626!13437-144E8;0.0102487!11904-125F5;0.022592!11905-125F6;0.982243!10039-101F3;0.624393!10791-110H8;0.649483!10017-101C8;0.0155719!10045-101F9;0.0924829!10509-107D5;0.436901!10839-111E2;0.0189531!10692-109F8;0.541961!10079-102A7;0.00028032!10078-102A6;0.0250381!10721-110A1;0.047827!10569-108B2;0.017634!10570-108B3;0.150204!10571-108B4;0.0494598!10647-109A8;0.19436!10752-110D5;0.00620921!10782-110G8;0.224775!10726-110A6;0.783545!10018-101C9;0.00621047!10086-102B5;0.0518523!10182-103D2;0.0192944!10165-103B3;0.300808!10499-107C4;0.255555!10408-106B3;0.0270537!10019-101D1;0.122792!10068-101I5;0.00369634!10075-102A3;0.0371479!10077-102A5;0.00359819!10727-110A7;0.000132482!10775-110G1;0.289522!10412-106B7;0.460149!12231-129F8;0.0292372!12232-129F9;0.358474!12233-129G1;0.878814!12234-129G2;0.820743!10414-106B9;0.225949!10170-103B8;0.00766954!10183-103D3;0.703379!10150-102I6;0.517039!10174-103C3;0.499327!10155-103A2;0.10443!10038-101F2;0.171328!10838-111E1;0.157344!10759-110E3;3.78182e-05!10514-107E1;0.00118848!10465-106H6;0.0144253!10691-109F7;0.00704319!10843-111E6;0.108704!10844-111E7;0.00702438!11747-123G1;0.0196441!11748-123G2;0.520765!11749-123G3;0.450075!11750-123G4;0.433369!11751-123G5;0.444689!11840-124H4;0.0670476!11752-123G6;0.129281!11753-123G7;0.455821!11754-123G8;0.463095!11755-123G9;0.436608!11756-123H1;0.978656!11833-124G6;0.666101!11760-123H5;0.707572!11836-124G9;0.739704!11758-123H3;0.243723!11835-124G8;0.157872!11762-123H7;0.0746456!11838-124H2;0.0666728!11757-123H2;0.140717!11759-123H4;0.42216!11761-123H6;0.272578!11842-124H6;0.365641!11837-124H1;0.134723!10568-108B1;0.0646133!13230-141I8;0.473157!13231-141I9;0.0524675!10696-109G3;0.0769397!10493-107B7;0.364102!10494-107B8;0.00349899!10850-111F4;0.0102635!10851-111F5;0.0636641!10852-111F6;0.24659!10853-111F7;0.284324!10854-111F8;0.135273!10855-111F9;0.0229277!10856-111G1;0.846396!10847-111F1;0.164866!10846-111E9;0.00385703!10848-111F2;0.0558666!10845-111E8;0.0879811!10857-111G2;0.00234813!10858-111G3;0.052486!10156-103A3;0.00577951!11901-125F2;0.523147!11902-125F3;0.854064!11903-125F4;0.703463!10689-109F5;0.953522!10648-109A9;0.0341964!10784-110H1;0.00372859!10744-110C6;0.00659833!10772-110F7;0.151671!10474-106I6;0.287343!10600-108E6;0.822853!10684-109E9;0.00190112!12226-129F3;0.0101335!12227-129F4;0.344322!10508-107D4;0.197659!10539-107G8;0.00529265!10607-108F4;0.0125673!10555-107I6;0.00329897!10774-110F9;0.0033044!10637-108I7;0.0204901!10663-109C6;0.00044324!10728-110A8;0.00310447!10729-110A9;0.000834121!10430-106D7;0.341267!10730-110B1;0.0160264!10813-111B3;0.313277!10812-111B2;0.391344!10037-101F1;0.029929!10172-103C1;0.566781!10163-103B1;0.75798!10076-102A4;0.551306!10073-102A1;0.647772!10036-101E9;0.450437!10195-103E6;0.660225!10277-104E7;0.483879!10434-106E2;0.5425!10550-107I1;0.0238083!10545-107H5;0.00909216!10544-107H4;0.270668!10704-109H2;0.00460606!10510-107D6;0.564662!10558-107I9;1.72868e-05!10020-101D2;0.00118696!10732-110B3;0.0552387!10049-101G4;0.120883!10698-109G5;0.112298!10437-106E5;0.000796075!10417-106C3;0.0898848!10035-101E8;0.0409125!10171-103B9;0.67786!10157-103A4;0.545853!10034-101E7;0.551107!10072-101I9;0.669394!10199-103F1;0.461362!10200-103F2;0.0116789!10697-109G4;0.0181646!10723-110A3;0.00445285!10179-103C8;0.403232!10160-103A7;0.454524!10180-103C9;0.370221!10162-103A9;0.462584!10021-101D3;0.696619!10840-111E3;0.172762!10706-109H4;0.197925!10033-101E6;0.0147162!10032-101E5;0.339194!10490-107B4;0.602353!10439-106E7;0.0425854!10022-101D4;0.0343067!10176-103C5;0.0506308!10469-106I1;0.589486!10067-101I4;0.000259397!10411-106B6;0.337079!10471-106I3;0.127726!10030-101E3;0.456823!10475-106I7;0.137573!10787-110H4;0.00144837!10477-106I9;0.00501525!10695-109G2;0.000265148!11771-123I7;0.801885!11772-123I8;0.174458!11773-123I9;0.231818!10093-102C3;0.14958!10442-106F1;0.00203627!10442-106F1;0.111433!10201-103F3;0.0832045!10639-108I9;0.0330436!11843-124H7;0.00238605!11841-124H5;0.00623932!10693-109F9;0.0247417!10436-106E4;2.58672e-05!10483-107A6;0.0389437!10282-104F3;0.0449133!10023-101D5;0.0952235!10066-101I3;0.113181!10065-101I2;0.0925973!10800-110I8;0.0484741!10610-108F7;0.000838832!10841-111E4;0.00162739!10541-107H1;0.00363139!10842-111E5;0.000974016!10562-108A4;0.00518393!10024-101D6;0.0249174!10064-101I1;0.0377051!10609-108F6;0.0478644!10048-101G3;0.339485!10781-110G7;0.176785!10181-103D1;0.0420327!10159-103A6;0.108224!10056-101H2;0.13015!10737-110B8;0.221664!10025-101D7;0.433464!10044-101F8;0.00413921!10424-106D1;0.0139386!10463-106H4;0.192291!10616-108G4;0.0311428!10486-107A9;0.0140732!10062-101H8;0.0868117!10202-103F4;0.201864!10158-103A5;0.00583433!10441-106E9;0.102913!10031-101E4;0.000423667!10063-101H9;0.538554!10063-101H9;0.465213!11763-123H8;0.032953!11765-123I1;0.0235618!11768-123I4;0.0102027!10807-111A6;0.0269531!10790-110H7;0.00315003!10798-110I6;0.014383!10786-110H3;0.0067453!10591-108D6;0.00267803!10593-108D8;0.00168366!10590-108D5;0.00131468!10026-101D8;0.00211182!10096-102C6;0.105234!10168-103B6;0.10471!10154-103A1;0.172784!10209-103G2;0.30354!10061-101H7;0.00386741!10027-101D9;0.037594!10043-101F7;0.46142!10783-110G9;0.480062!10028-101E1;0.161928!10060-101H6;0.0634757!10203-103F5;0.134992!10059-101H5;0.00758928!10047-101G2;0.0147676!10029-101E2;0.000749246!10058-101H4;0.00247868!10418-106C4;0.0277148!10492-107B6;0.00271475!10694-109G1;0.0099327!10797-110I5;0.246362!10057-101H3;2.04622e-05!10100-102D1;0.0246481!10055-101H1;0.0873977!10204-103F6;0.0835662!10191-103E2;0.61067!10563-108A5;0.0125006
|name=CNhs12498_bl_f2
|name=CNhs12498_bl_f2
|tomtom_result=REI1#MA0364.1;0;0.00155484;0.740105;0.864331;7;GTCCTGATG;CCCCTGA;+!NRG1#MA0347.1;8;0.00181582;0.864331;0.864331;9;GTCCTGATG;TGCGATGGACCCTGATCTAG;-!ASH1#MA0276.1;-2;0.00312124;1.48571;0.990473;7;GTCCTGATG;CCCGATCCGG;-!YJL103C#MA0427.1;1;0.00470618;2.24014;1;9;GTCCTGATG;TCTCCGGAGCT;-!SOK2#MA0385.1;0;0.00663202;3.15684;1;9;GTCCTGATG;TGCCTGCAGGT;-!HAP4#MA0315.1;3;0.0104124;4.95631;1;9;GTCCTGATG;TCGCCTCTGATTGGT;-!USV1#MA0413.1;6;0.0105523;5.02289;1;9;GTCCTGATG;AAATTCCCCCTGAATTTGTG;+!CTCF#MA0139.1;6;0.0120186;5.72084;1;9;GTCCTGATG;TAGCGCCCCCTGGTGGCCA;-!ESR1#MA0112.2;10;0.0137572;6.54845;1;9;GTCCTGATG;AGGTCAGGGTGACCTGGGCC;-!TBF1#MA0403.1;1;0.0154019;7.33129;1;7;GTCCTGATG;AACCCTAA;+!CAT8#MA0280.1;-2;0.0181319;8.6308;1;6;GTCCTGATG;CCGGAA;+
}}
}}

Latest revision as of 13:16, 7 September 2012

Full Name: CNhs12498_bl_f2

Motif matrix
POACGT
178.9604211667918785.19109882223165105.1151123169850526.803432114847464
231.829082435867722124.6904983135750213.392324108255767126.15815956315755
34.941425156256692255.129146834657184.94142515625669231.058067273685733
40.0296.070064420856170.00.0
50.00.00.0296.07006442085617
60.220433980324284430.22043398032428443295.40876247988330.22043398032428443
7125.400306761890578.5025858014978689.174640311018892.9925315464488245
874.2218638301170243.99101252572019444.107157604546586133.75003046047237
927.70233201642369667.49013113719111119.487731601039181.38986966620217

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
REI1#MA0364.100.001554840.7401050.8643317GTCCTGATGCCCCTGA+
NRG1#MA0347.180.001815820.8643310.8643319GTCCTGATGTGCGATGGACCCTGATCTAG-
ASH1#MA0276.1-20.003121241.485710.9904737GTCCTGATGCCCGATCCGG-
YJL103C#MA0427.110.004706182.2401419GTCCTGATGTCTCCGGAGCT-
SOK2#MA0385.100.006632023.1568419GTCCTGATGTGCCTGCAGGT-
HAP4#MA0315.130.01041244.9563119GTCCTGATGTCGCCTCTGATTGGT-
USV1#MA0413.160.01055235.0228919GTCCTGATGAAATTCCCCCTGAATTTGTG+
CTCF#MA0139.160.01201865.7208419GTCCTGATGTAGCGCCCCCTGGTGGCCA-
ESR1#MA0112.2100.01375726.5484519GTCCTGATGAGGTCAGGGTGACCTGGGCC-
TBF1#MA0403.110.01540197.3312917GTCCTGATGAACCCTAA+
CAT8#MA0280.1-20.01813198.630816GTCCTGATGCCGGAA+
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