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MacroAPE 1083:Motif TNCACG: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;0;0;3968!02;992;992;992;992!03;0;3968;0;0!04;3968;0;0;0!05;0;3968;0;0!06;0;0;3968;0 |macroape_1083_sample_pvalues=11376-118A8;0.00175073...")
 
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!12184-129A6;0.0103362!10809-111A8;0.00382226!10597-108E3;0.817017!10717-109I6;0.756566!10455-106G5;0.575756!10534-107G3;0.727418!10429-106D6;0.402147!10464-106H5;0.779256!10827-111C8;0.274771!10789-110H6;0.238357!10828-111C9;0.512354!10788-110H5;0.3088!10792-110H9;0.301666!10765-110E9;0.468315!10829-111D1;0.425062!10830-111D2;0.125864!10831-111D3;0.844285!10832-111D4;0.474301!10833-111D5;0.324694!10764-110E8;0.393288!10770-110F5;0.376594!10399-106A3;0.574496!10400-106A4;0.273995!10405-106A9;0.284608!10834-111D6;0.297416!10835-111D7;0.313007!10836-111D8;0.704971!10837-111D9;0.666456!10699-109G6;0.612064!10802-111A1;0.701374!10796-110I4;0.559126!10010-101C1;0.472048!10810-111A9;0.388662!10421-106C7;0.6477!10708-109H6;0.351366!12235-129G3;0.398253!12236-129G4;0.473727!12237-129G5;0.279709!10167-103B5;0.65522!10151-102I7;0.216208!10428-106D5;0.194342!10795-110I3;0.00317834!10805-111A4;0.232215!10052-101G7;0.370557!10189-103D9;0.249424!10589-108D4;0.104364!10425-106D2;0.28133!10427-106D4;0.449367!10702-109G9;0.504181!10432-106D9;0.0456763!10496-107C1;0.383816!10718-109I7;0.383727!10011-101C2;0.488815!10053-101G8;0.41399!10686-109F2;0.0105352!10084-102B3;0.0684051!10012-101C3;0.20734!10085-102B4;0.181277!10482-107A5;0.305856!10419-106C5;0.72504!10080-102A8;0.760743!10760-110E4;0.367529!10709-109H7;0.276312!10710-109H8;0.399253!10703-109H1;0.57431!10719-109I8;0.340628!10642-109A3;0.096223!10177-103C6;0.698838!10164-103B2;0.211978!10173-103C2;0.268129!10166-103B4;0.149082!10083-102B2;0.160009!10188-103D8;0.207306!10552-107I3;0.209357!10553-107I4;0.142746!10013-101C4;0.553799!10536-107G5;0.211521!10618-108G6;0.115412!10423-106C9;0.502494!10785-110H2;0.585566!12238-129G6;0.987965!12239-129G7;0.891137!12240-129G8;0.149031!10416-106C2;0.457806!10801-110I9;0.402493!10766-110F1;0.468953!10824-111C5;0.48347!10825-111C6;0.383584!10826-111C7;0.390184!10454-106G4;0.454367!10409-106B4;0.239941!10638-108I8;0.497982!10636-108I6;0.139235!10513-107D9;0.768774!10420-106C6;0.434535!10082-102B1;0.339623!10014-101C5;0.464292!10070-101I7;0.362633!10452-106G2;0.310485!10453-106G3;0.522916!10449-106F8;0.174079!10042-101F6;0.133662!10069-101I6;0.0666454!10193-103E4;0.474989!10631-108I1;0.18651!10438-106E6;0.660692!10488-107B2;0.627461!10196-103E7;0.268535!10071-101I8;0.254915!10071-101I8;0.239744!10041-101F5;0.315824!10451-106G1;0.156302!10450-106F9;0.348461!10604-108F1;0.160881!10605-108F2;0.614155!10606-108F3;0.316029!10603-108E9;0.516731!10497-107C2;0.462465!10448-106F7;0.158838!10643-109A4;0.459301!10426-106D3;0.941533!10431-106D8;0.586846!10197-103E8;0.342897!10443-106F2;0.340096!10815-111B5;0.182499!10816-111B6;0.3195!10817-111B7;0.347546!10015-101C6;0.316099!10410-106B5;0.241782!10054-101G9;0.84017!10758-110E2;0.23164!10711-109H9;0.0172733!10040-101F4;0.20837!10470-106I2;0.182411!10415-106C1;0.975176!10198-103E9;0.315397!10614-108G2;0.117431!10612-108F9;0.171858!10549-107H9;0.216005!10615-108G3;0.756925!10487-107B1;0.76055!10433-106E1;0.0866133!10688-109F4;0.136718!10444-106F3;0.922864!10444-106F3;0.062453!10485-107A8;0.153594!10413-106B8;0.362749!10175-103C4;0.0828142!10161-103A8;0.170181!12131-128D7;0.114185!10624-108H3;0.756826!10712-109I1;0.0149017!10205-103F7;0.159957!10206-103F8;0.351408!10207-103F9;0.307864!10050-101G5;0.541494!10051-101G6;0.214837!10016-101C7;0.325238!10046-101G1;0.359697!10778-110G4;0.260535!10633-108I3;0.158154!10818-111B8;0.481217!10819-111B9;0.0802594!10820-111C1;0.0818578!10484-107A7;0.0867879!10808-111A7;0.196321!10169-103B7;0.171044!10153-102I9;0.201244!13425-144D5;0.178913!13433-144E4;0.417793!13437-144E8;0.469661!11904-125F5;0.353485!11905-125F6;0.193377!10039-101F3;0.289053!10791-110H8;0.20262!10017-101C8;0.40421!10045-101F9;0.274761!10509-107D5;0.146631!10839-111E2;0.0330508!10692-109F8;0.269232!10079-102A7;0.472473!10078-102A6;0.32026!10721-110A1;0.367118!10569-108B2;0.112294!10570-108B3;0.0227561!10571-108B4;0.00924294!10647-109A8;0.0329062!10752-110D5;0.477365!10782-110G8;0.363369!10726-110A6;0.0156994!10018-101C9;0.235169!10086-102B5;0.971169!10182-103D2;0.680558!10165-103B3;0.103844!10499-107C4;0.0903683!10408-106B3;0.264784!10019-101D1;0.706916!10068-101I5;0.162999!10075-102A3;0.0785162!10077-102A5;0.102608!10727-110A7;0.304288!10775-110G1;0.337955!10412-106B7;0.756565!12231-129F8;0.917895!12232-129F9;0.944948!12233-129G1;0.561919!12234-129G2;0.921002!10414-106B9;0.654438!10170-103B8;0.27867!10183-103D3;0.202201!10150-102I6;0.213047!10174-103C3;0.183595!10155-103A2;0.0927878!10038-101F2;0.10633!10838-111E1;0.108809!10759-110E3;0.332624!10514-107E1;0.0897397!10465-106H6;0.33768!10691-109F7;0.355417!10843-111E6;0.0140319!10844-111E7;0.520269!11747-123G1;0.995827!11748-123G2;1.47463e-05!11749-123G3;0.000272632!11750-123G4;0.00101637!11751-123G5;0.0688378!11840-124H4;0.014794!11752-123G6;0.0314906!11753-123G7;0.00203268!11754-123G8;0.00881264!11755-123G9;0.014171!11756-123H1;0.00236769!11833-124G6;0.00141627!11760-123H5;0.0183411!11836-124G9;0.00219276!11758-123H3;0.0707876!11835-124G8;0.00570062!11762-123H7;0.0043027!11838-124H2;0.0781368!11757-123H2;0.0164414!11759-123H4;0.00124111!11761-123H6;0.0155415!11842-124H6;0.0236872!11837-124H1;0.0111077!10568-108B1;0.00927136!13230-141I8;0.583703!13231-141I9;0.245643!10696-109G3;0.181743!10493-107B7;0.978549!10494-107B8;0.180896!10850-111F4;0.1611!10851-111F5;0.119663!10852-111F6;0.0243147!10853-111F7;0.0441003!10854-111F8;0.102726!10855-111F9;0.0630256!10856-111G1;0.149427!10847-111F1;0.162479!10846-111E9;0.0722591!10848-111F2;0.0391003!10845-111E8;0.11866!10857-111G2;0.373276!10858-111G3;0.373542!10156-103A3;0.0647357!11901-125F2;0.171193!11902-125F3;0.0576145!11903-125F4;0.0677088!10689-109F5;0.109425!10648-109A9;0.231228!10784-110H1;0.0258551!10744-110C6;0.458007!10772-110F7;0.994479!10474-106I6;0.16922!10600-108E6;0.492924!10684-109E9;0.286752!12226-129F3;0.0431768!12227-129F4;0.554909!10508-107D4;0.229106!10539-107G8;0.70767!10607-108F4;0.917209!10555-107I6;0.197463!10774-110F9;0.986518!10637-108I7;0.0663937!10663-109C6;0.307554!10728-110A8;0.89021!10729-110A9;0.0631415!10430-106D7;0.0646718!10730-110B1;0.717488!10813-111B3;0.709454!10812-111B2;0.806764!10037-101F1;0.102162!10172-103C1;0.219188!10163-103B1;0.18448!10076-102A4;0.141917!10073-102A1;0.208359!10036-101E9;0.344243!10195-103E6;0.177779!10277-104E7;0.201549!10434-106E2;0.0466385!10550-107I1;0.863444!10545-107H5;0.172864!10544-107H4;0.840979!10704-109H2;0.444405!10510-107D6;0.000271331!10558-107I9;0.100997!10020-101D2;0.0662452!10732-110B3;0.319044!10049-101G4;0.00016465!10698-109G5;0.844584!10437-106E5;0.795769!10417-106C3;0.240629!10035-101E8;0.665129!10171-103B9;0.187289!10157-103A4;0.170871!10034-101E7;0.191846!10072-101I9;0.18192!10199-103F1;0.354892!10200-103F2;0.133208!10697-109G4;0.405326!10723-110A3;0.266129!10179-103C8;0.421777!10160-103A7;0.211912!10180-103C9;0.163869!10162-103A9;0.285574!10021-101D3;0.158645!10840-111E3;0.189345!10706-109H4;0.515133!10033-101E6;0.479345!10032-101E5;0.15057!10490-107B4;0.177563!10439-106E7;0.35608!10022-101D4;0.148698!10176-103C5;0.256377!10469-106I1;0.260061!10067-101I4;0.454493!10411-106B6;0.369396!10471-106I3;0.346911!10030-101E3;0.0224467!10475-106I7;0.191031!10787-110H4;0.353045!10477-106I9;0.356058!10695-109G2;0.0271211!11771-123I7;0.986362!11772-123I8;0.113688!11773-123I9;0.138914!10093-102C3;0.723509!10442-106F1;0.0730289!10442-106F1;0.00821936!10201-103F3;0.00447645!10639-108I9;0.256199!11843-124H7;0.780955!11841-124H5;0.149942!10693-109F9;0.141114!10436-106E4;0.465764!10483-107A6;0.683457!10282-104F3;0.564074!10023-101D5;0.518983!10066-101I3;0.509794!10065-101I2;0.627968!10800-110I8;0.381216!10610-108F7;0.308595!10841-111E4;0.595641!10541-107H1;0.767258!10842-111E5;0.471828!10562-108A4;0.132913!10024-101D6;0.870484!10064-101I1;0.131198!10609-108F6;0.339951!10048-101G3;0.102448!10781-110G7;0.477817!10181-103D1;0.823926!10159-103A6;0.0925813!10056-101H2;0.0840738!10737-110B8;0.191417!10025-101D7;0.0345598!10044-101F8;0.0813043!10424-106D1;0.0807847!10463-106H4;0.720854!10616-108G4;0.617748!10486-107A9;0.0445284!10062-101H8;0.268373!10202-103F4;0.506496!10158-103A5;0.186267!10441-106E9;0.0730506!10031-101E4;0.306665!10063-101H9;0.193259!10063-101H9;0.293032!11763-123H8;0.224756!11765-123I1;0.0755643!11768-123I4;0.0591562!10807-111A6;0.0410875!10790-110H7;0.766511!10798-110I6;0.314432!10786-110H3;0.710858!10591-108D6;0.234881!10593-108D8;0.330265!10590-108D5;0.114847!10026-101D8;0.295152!10096-102C6;0.0893738!10168-103B6;0.488262!10154-103A1;0.123049!10209-103G2;0.13879!10061-101H7;0.247824!10027-101D9;0.218115!10043-101F7;0.11855!10783-110G9;0.0125318!10028-101E1;0.0872633!10060-101H6;0.283403!10203-103F5;0.114409!10059-101H5;0.237758!10047-101G2;0.275576!10029-101E2;0.0755207!10058-101H4;0.278571!10418-106C4;0.300273!10492-107B6;0.193174!10694-109G1;0.105913!10797-110I5;0.445727!10057-101H3;0.179958!10100-102D1;0.312565!10055-101H1;0.291379!10204-103F6;0.277315!10191-103E2;0.445275!10563-108A5;0.24119
|name=motif_TNCACG
|name=motif_TNCACG
|tomtom_result=Pax6#MA0069.1;0;0.00453272;2.15758;0.932012;6;TACACG;TTCACGCATGAGTT;+!USF1#MA0093.1;-1;0.00481952;2.29409;0.932012;5;TACACG;CCACGTG;-!HMRA2#MA0318.1;2;0.00583254;2.77629;0.932012;6;TACACG;ATTACATG;-!HIF1A::ARNT#MA0259.1;-1;0.00685618;3.26354;0.932012;5;TACACG;GCACGTCC;-!CBF1#MA0281.1;-1;0.00806699;3.83989;0.932012;5;TACACG;GCACGTGA;+!MAX#MA0058.1;-1;0.00825484;3.9293;0.932012;5;TACACG;TCACGTGGTC;-!Mycn#MA0104.2;0;0.00929282;4.42338;0.932012;6;TACACG;CGCACGTGGC;+!bZIP911#MA0097.1;1;0.0102399;4.87421;0.932012;6;TACACG;GGCCACGTCATC;-!PHO4#MA0357.1;-1;0.0109214;5.19858;0.932012;5;TACACG;GCACGTGC;+!HAC1#MA0310.1;0;0.0119081;5.66827;0.932012;6;TACACG;GACACGTG;+!TYE7#MA0409.1;-1;0.012052;5.73676;0.932012;5;TACACG;TCACGTG;-!Myc#MA0147.1;0;0.0127271;6.05808;0.932012;6;TACACG;CGCACGTGGC;+!ABF1#MA0265.1;9;0.0180501;8.59187;1;6;TACACG;ATATCACTTTATACGA;-
}}
}}

Latest revision as of 13:24, 7 September 2012

Full Name: motif_TNCACG

Motif matrix
POACGT
010003968
02992992992992
030396800
043968000
050396800
060039680

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Pax6#MA0069.100.004532722.157580.9320126TACACGTTCACGCATGAGTT+
USF1#MA0093.1-10.004819522.294090.9320125TACACGCCACGTG-
HMRA2#MA0318.120.005832542.776290.9320126TACACGATTACATG-
HIF1A::ARNT#MA0259.1-10.006856183.263540.9320125TACACGGCACGTCC-
CBF1#MA0281.1-10.008066993.839890.9320125TACACGGCACGTGA+
MAX#MA0058.1-10.008254843.92930.9320125TACACGTCACGTGGTC-
Mycn#MA0104.200.009292824.423380.9320126TACACGCGCACGTGGC+
bZIP911#MA0097.110.01023994.874210.9320126TACACGGGCCACGTCATC-
PHO4#MA0357.1-10.01092145.198580.9320125TACACGGCACGTGC+
HAC1#MA0310.100.01190815.668270.9320126TACACGGACACGTG+
TYE7#MA0409.1-10.0120525.736760.9320125TACACGTCACGTG-
Myc#MA0147.100.01272716.058080.9320126TACACGCGCACGTGGC+
ABF1#MA0265.190.01805018.5918716TACACGATATCACTTTATACGA-
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