MacroAPE 1083:AGACTCAGA,motif213: Difference between revisions
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(Created page with "{{Macroape_1083
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427!10597-108E3;0.329526!10717-109I6;0.655086!10455-106G5;0.0831249!10534-107G3;0.0211499!10429-106D6;0.00294461!10464-106H5;0.114038!10827-111C8;0.0334014!10789-110H6;0.00465032!10828-111C9;0.0155453!10788-110H5;0.00260515!10792-110H9;0.0138522!10765-110E9;0.00393337!10829-111D1;0.00329351!10830-111D2;0.0185204!10831-111D3;0.0166682!10832-111D4;0.0212979!10833-111D5;0.0293947!10764-110E8;0.0266748!10770-110F5;0.0416112!10399-106A3;0.00797102!10400-106A4;0.117946!10405-106A9;0.100082!10834-111D6;0.123543!10835-111D7;0.00867628!10836-111D8;0.245143!10837-111D9;0.363163!10699-109G6;0.0500135!10802-111A1;0.00570184!10796-110I4;0.0891832!10010-101C1;0.0274152!10810-111A9;0.132931!10421-106C7;0.0516202!10708-109H6;0.316165!12235-129G3;0.132221!12236-129G4;0.913722!12237-129G5;0.78636!10167-103B5;0.741153!10151-102I7;0.422671!10428-106D5;0.384111!10795-110I3;0.41246!10805-111A4;0.0970543!10052-101G7;0.0254955!10189-103D9;0.0962509!10589-108D4;0.492789!10425-106D2;0.00586404!10427-106D4;0.473533!10702-109G9;0.149303!10432-106D9;0.00825029!10496-107C1;0.0967967!10718-109I7;0.732826!10011-101C2;0.0371409!10053-101G8;0.154235!10686-109F2;0.283215!10084-102B3;0.468706!10012-101C3;0.503849!10085-102B4;0.371809!10482-107A5;0.592403!10419-106C5;0.0386675!10080-102A8;0.0264663!10760-110E4;0.391654!10709-109H7;0.192633!10710-109H8;0.48422!10703-109H1;0.0190153!10719-109I8;0.172867!10642-109A3;0.0651919!10177-103C6;0.0570045!10164-103B2;0.203032!10173-103C2;0.440054!10166-103B4;0.443119!10083-102B2;0.527664!10188-103D8;0.597638!10552-107I3;0.445341!10553-107I4;0.0321094!10013-101C4;0.410805!10536-107G5;0.20816!10618-108G6;0.0112655!10423-106C9;0.0757093!10785-110H2;0.0671921!12238-129G6;0.28363!12239-129G7;0.0626565!12240-129G8;0.145299!10416-106C2;0.0798326!10801-110I9;0.00794706!10766-110F1;0.0179999!10824-111C5;0.0546815!10825-111C6;0.090484!10826-111C7;0.109714!10454-106G4;0.182254!10409-106B4;0.158778!10638-108I8;0.0502773!10636-108I6;0.0984308!10513-107D9;0.12931!10420-106C6;0.0116517!10082-102B1;0.00655654!10014-101C5;0.775011!10070-101I7;0.587269!10452-106G2;0.545359!10453-106G3;0.62521!10449-106F8;0.161871!10042-101F6;0.192941!10069-101I6;0.41744!10193-103E4;0.0483793!10631-108I1;0.511201!10438-106E6;0.0253347!10488-107B2;0.217168!10196-103E7;0.0890115!10071-101I8;0.655614!10071-101I8;0.141023!10041-101F5;0.501601!10451-106G1;0.179954!10450-106F9;0.0966082!10604-108F1;0.035671!10605-108F2;0.524587!10606-108F3;0.460016!10603-108E9;0.498661!10497-107C2;0.365134!10448-106F7;0.569378!10643-109A4;0.262387!10426-106D3;0.0100196!10431-106D8;0.619829!10197-103E8;0.157736!10443-106F2;0.392403!10815-111B5;0.662142!10816-111B6;0.0539763!10817-111B7;0.0825103!10015-101C6;0.0620625!10410-106B5;0.282643!10054-101G9;0.0770073!10758-110E2;0.174098!10711-109H9;0.317798!10040-101F4;0.103095!10470-106I2;0.485287!10415-106C1;0.0634491!10198-103E9;0.762941!10614-108G2;0.082131!10612-108F9;0.163853!10549-107H9;0.0540075!10615-108G3;0.0341306!10487-107B1;0.0312458!10433-106E1;0.28986!10688-109F4;0.778784!10444-106F3;0.422147!10444-106F3;0.910495!10485-107A8;0.867067!10413-106B8;0.0936621!10175-103C4;0.899928!10161-103A8;0.173793!12131-128D7;0.295082!10624-108H3;0.343501!10712-109I1;0.106231!10205-103F7;0.0339365!10206-103F8;0.135311!10207-103F9;0.2502!10050-101G5;0.173577!10051-101G6;0.461141!10016-101C7;0.403208!10046-101G1;0.360802!10778-110G4;0.32294!10633-108I3;0.0106198!10818-111B8;0.1749!10819-111B9;0.01911!10820-111C1;0.0203943!10484-107A7;0.0209838!10808-111A7;0.151078!10169-103B7;0.00264648!10153-102I9;0.375316!13425-144D5;0.370014!13433-144E4;0.0253148!13437-144E8;0.0163061!11904-125F5;0.0426474!11905-125F6;0.736589!10039-101F3;0.285169!10791-110H8;0.450471!10017-101C8;0.0253682!10045-101F9;0.594396!10509-107D5;0.66815!10839-111E2;0.703865!10692-109F8;0.639845!10079-102A7;0.176247!10078-102A6;0.350808!10721-110A1;0.418786!10569-108B2;0.0765463!10570-108B3;0.159616!10571-108B4;0.358324!10647-109A8;0.0704351!10752-110D5;0.603981!10782-110G8;0.0671906!10726-110A6;0.376842!10018-101C9;0.0803945!10086-102B5;0.535608!10182-103D2;0.806754!10165-103B3;0.173009!10499-107C4;0.266472!10408-106B3;0.219587!10019-101D1;0.735021!10068-101I5;0.240113!10075-102A3;0.454296!10077-102A5;0.320588!10727-110A7;0.286987!10775-110G1;0.505316!10412-106B7;0.00300305!12231-129F8;0.670187!12232-129F9;0.127019!12233-129G1;0.0428924!12234-129G2;0.0214899!10414-106B9;0.369391!10170-103B8;0.111753!10183-103D3;0.434892!10150-102I6;0.419629!10174-103C3;0.438252!10155-103A2;0.2907!10038-101F2;0.298278!10838-111E1;0.217091!10759-110E3;0.222949!10514-107E1;0.305317!10465-106H6;0.221233!10691-109F7;0.402032!10843-111E6;0.343753!10844-111E7;0.111239!11747-123G1;0.208307!11748-123G2;0.173797!11749-123G3;0.325361!11750-123G4;0.218803!11751-123G5;0.286749!11840-124H4;0.559581!11752-123G6;0.025544!11753-123G7;0.401296!11754-123G8;0.0417643!11755-123G9;0.188375!11756-123H1;0.664152!11833-124G6;0.559132!11760-123H5;0.0149511!11836-124G9;0.491694!11758-123H3;0.173588!11835-124G8;0.124405!11762-123H7;0.0430715!11838-124H2;0.165241!11757-123H2;0.0755162!11759-123H4;0.399717!11761-123H6;0.148289!11842-124H6;0.221935!11837-124H1;0.344479!10568-108B1;0.0413705!13230-141I8;0.660829!13231-141I9;0.0495216!10696-109G3;0.121877!10493-107B7;0.04735!10494-107B8;0.430408!10850-111F4;0.918574!10851-111F5;0.669737!10852-111F6;0.979199!10853-111F7;0.913604!10854-111F8;0.246551!10855-111F9;0.54626!10856-111G1;0.486965!10847-111F1;0.379343!10846-111E9;0.365174!10848-111F2;0.788685!10845-111E8;0.436508!10857-111G2;0.371491!10858-111G3;0.737118!10156-103A3;0.577932!11901-125F2;0.426345!11902-125F3;0.529487!11903-125F4;0.854321!10689-109F5;0.798421!10648-109A9;0.191625!10784-110H1;0.293578!10744-110C6;0.205735!10772-110F7;0.129856!10474-106I6;0.00327779!10600-108E6;0.0516759!10684-109E9;0.745745!12226-129F3;0.899527!12227-129F4;0.991922!10508-107D4;4.31521e-05!10539-107G8;0.24791!10607-108F4;0.051495!10555-107I6;0.0555149!10774-110F9;0.0548867!10637-108I7;0.0391453!10663-109C6;0.0470177!10728-110A8;0.259852!10729-110A9;0.44643!10430-106D7;0.0821101!10730-110B1;0.0369076!10813-111B3;0.310932!10812-111B2;0.00783872!10037-101F1;0.0262709!10172-103C1;0.427717!10163-103B1;0.441742!10076-102A4;0.353182!10073-102A1;0.507332!10036-101E9;0.558085!10195-103E6;0.531647!10277-104E7;0.436061!10434-106E2;0.374996!10550-107I1;0.402977!10545-107H5;0.120006!10544-107H4;0.599654!10704-109H2;0.222285!10510-107D6;0.0833414!10558-107I9;0.0819123!10020-101D2;0.374015!10732-110B3;0.478497!10049-101G4;0.0444037!10698-109G5;0.437443!10437-106E5;0.0748956!10417-106C3;0.00745828!10035-101E8;0.34391!10171-103B9;0.462963!10157-103A4;0.574381!10034-101E7;0.3785!10072-101I9;0.430118!10199-103F1;0.876862!10200-103F2;0.794835!10697-109G4;0.177505!10723-110A3;0.401694!10179-103C8;0.111038!10160-103A7;0.156457!10180-103C9;0.264645!10162-103A9;0.65779!10021-101D3;0.672821!10840-111E3;0.061737!10706-109H4;0.120821!10033-101E6;0.940714!10032-101E5;0.295984!10490-107B4;0.500816!10439-106E7;0.110774!10022-101D4;0.0222358!10176-103C5;0.467056!10469-106I1;0.415122!10067-101I4;0.208394!10411-106B6;0.439442!10471-106I3;0.448225!10030-101E3;0.405216!10475-106I7;0.434948!10787-110H4;0.0744181!10477-106I9;0.208234!10695-109G2;0.814357!11771-123I7;0.0846124!11772-123I8;0.929143!11773-123I9;0.72832!10093-102C3;0.336468!10442-106F1;0.56571!10442-106F1;0.412225!10201-103F3;0.513311!10639-108I9;0.448316!11843-124H7;0.0433108!11841-124H5;0.197001!10693-109F9;0.351403!10436-106E4;0.105716!10483-107A6;0.0984532!10282-104F3;0.341332!10023-101D5;0.268302!10066-101I3;0.332323!10065-101I2;0.410409!10800-110I8;0.0822236!10610-108F7;0.00137096!10841-111E4;0.00133001!10541-107H1;0.0390883!10842-111E5;0.129681!10562-108A4;0.190358!10024-101D6;0.0188068!10064-101I1;0.367557!10609-108F6;0.695689!10048-101G3;0.00539!10781-110G7;0.360252!10181-103D1;0.0844979!10159-103A6;0.118655!10056-101H2;0.230667!10737-110B8;0.209961!10025-101D7;0.10098!10044-101F8;0.199967!10424-106D1;0.180341!10463-106H4;0.383671!10616-108G4;0.992222!10486-107A9;0.478308!10062-101H8;0.301387!10202-103F4;0.116496!10158-103A5;0.730959!10441-106E9;0.351319!10031-101E4;0.00472894!10063-101H9;0.48038!10063-101H9;0.788899!11763-123H8;0.146447!11765-123I1;0.071093!11768-123I4;0.19108!10807-111A6;0.0664224!10790-110H7;0.0511073!10798-110I6;0.0461157!10786-110H3;0.0925234!10591-108D6;0.312649!10593-108D8;0.23151!10590-108D5;0.102031!10026-101D8;0.0491063!10096-102C6;0.865017!10168-103B6;0.0284628!10154-103A1;0.326446!10209-103G2;0.408581!10061-101H7;0.192542!10027-101D9;0.226474!10043-101F7;0.866609!10783-110G9;0.176194!10028-101E1;0.0108135!10060-101H6;0.809588!10203-103F5;0.287052!10059-101H5;0.1027!10047-101G2;0.15675!10029-101E2;0.242291!10058-101H4;0.255761!10418-106C4;0.234784!10492-107B6;0.21326!10694-109G1;0.117682!10797-110I5;0.111348!10057-101H3;0.311681!10100-102D1;0.111246!10055-101H1;0.412058!10204-103F6;0.24489!10191-103E2;0.201836!10563-108A5;0.0537557 | ||
|name=AGACTCAGA,motif213,CNhs11954,T:2894.0(47.76%),B:30571.8(39.29%),P:1e-40 | |name=AGACTCAGA,motif213,CNhs11954,T:2894.0(47.76%),B:30571.8(39.29%),P:1e-40 | ||
|tomtom_result=ARG80#MA0271.1;0;0.00227044;1.08073;1;6;AGACTCAGA;AGACGC;+!AP1#MA0099.2;0;0.00367412;1.74888;1;7;AGACTCAGA;TGACTCA;+!NFE2L2#MA0150.1;1;0.00514357;2.44834;1;9;AGACTCAGA;ATGACTCAGCA;+!Fos#MA0099.1;0;0.00791836;3.76914;1;8;AGACTCAGA;TGACTCAC;-!FHL1#MA0295.1;-1;0.008562;4.07551;1;8;AGACTCAGA;GACGCAAA;+!ARG81#MA0272.1;0;0.0147985;7.04409;1;8;AGACTCAGA;AGAGTCAC;- | |||
}} | }} |
Latest revision as of 13:55, 7 September 2012
Full Name: AGACTCAGA,motif213,CNhs11954,T:2894.0(47.76%),B:30571.8(39.29%),P:1e-40
Motif matrix | ||||||||||||||||||||||||||||||||||||||||||||||||||
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Sample specificity
The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon
TomTom analysis
<br>Analyst: Michiel de Hoon and Hiroko Ohmiya
Target_ID | Optimal_offset | p-value | E-value | q-value | Overlap | Query consensus | Target consensus | Orientation |
---|---|---|---|---|---|---|---|---|
ARG80#MA0271.1 | 0 | 0.00227044 | 1.08073 | 1 | 6 | AGACTCAGA | AGACGC | + |
AP1#MA0099.2 | 0 | 0.00367412 | 1.74888 | 1 | 7 | AGACTCAGA | TGACTCA | + |
NFE2L2#MA0150.1 | 1 | 0.00514357 | 2.44834 | 1 | 9 | AGACTCAGA | ATGACTCAGCA | + |
Fos#MA0099.1 | 0 | 0.00791836 | 3.76914 | 1 | 8 | AGACTCAGA | TGACTCAC | - |
FHL1#MA0295.1 | -1 | 0.008562 | 4.07551 | 1 | 8 | AGACTCAGA | GACGCAAA | + |
ARG81#MA0272.1 | 0 | 0.0147985 | 7.04409 | 1 | 8 | AGACTCAGA | AGAGTCAC | - |