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MacroAPE 1083:TCCTATTG,motif697: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;1.266;206.358;1.266;1057.11!2;105.078;825.432;169.644;165.846!3;1.266;1262.202;1.266;1.266!4;1.266;56.97;279.786;927.978!5;1128.006;1.266;1....")
 
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10789-110H6;0.204118!10828-111C9;0.969648!10788-110H5;0.726027!10792-110H9;0.965588!10765-110E9;0.439499!10829-111D1;0.973456!10830-111D2;0.538121!10831-111D3;0.506397!10832-111D4;0.621117!10833-111D5;0.744685!10764-110E8;0.721706!10770-110F5;0.743145!10399-106A3;0.99312!10400-106A4;0.834231!10405-106A9;0.821519!10834-111D6;0.790408!10835-111D7;0.661773!10836-111D8;0.894679!10837-111D9;0.788512!10699-109G6;0.964786!10802-111A1;0.880008!10796-110I4;0.634585!10010-101C1;0.852966!10810-111A9;0.866308!10421-106C7;0.265238!10708-109H6;0.737881!12235-129G3;0.499672!12236-129G4;0.563683!12237-129G5;0.371097!10167-103B5;0.750913!10151-102I7;0.761311!10428-106D5;0.728653!10795-110I3;0.581505!10805-111A4;0.44291!10052-101G7;0.0451495!10189-103D9;0.70096!10589-108D4;0.983813!10425-106D2;0.726277!10427-106D4;0.195993!10702-109G9;0.784358!10432-106D9;0.156356!10496-107C1;0.386237!10718-109I7;0.906458!10011-101C2;0.780026!10053-101G8;0.913213!10686-109F2;0.962582!10084-102B3;0.671722!10012-101C3;0.527112!10085-102B4;0.980443!10482-107A5;0.146056!10419-106C5;0.109393!10080-102A8;0.0192152!10760-110E4;0.449383!10709-109H7;0.946501!10710-109H8;0.169545!10703-109H1;0.0337372!10719-109I8;0.585181!10642-109A3;0.570838!10177-103C6;0.822464!10164-103B2;0.763389!10173-103C2;0.753704!10166-103B4;0.79887!10083-102B2;0.798466!10188-103D8;0.626355!10552-107I3;0.908194!10553-107I4;0.49913!10013-101C4;0.140346!10536-107G5;0.738793!10618-108G6;0.774285!10423-106C9;0.461058!10785-110H2;0.480863!12238-129G6;0.151567!12239-129G7;0.86205!12240-129G8;0.176901!10416-106C2;0.732404!10801-110I9;0.570487!10766-110F1;0.338347!10824-111C5;0.514229!10825-111C6;0.906275!10826-111C7;0.933319!10454-106G4;0.8635!10409-106B4;0.924294!10638-108I8;0.961607!10636-108I6;0.615386!10513-107D9;0.311621!10420-106C6;0.292213!10082-102B1;0.396954!10014-101C5;0.811428!10070-101I7;0.390062!10452-106G2;0.942634!10453-106G3;0.321843!10449-106F8;0.515382!10042-101F6;0.512512!10069-101I6;0.572023!10193-103E4;0.763037!10631-108I1;0.68495!10438-106E6;0.814679!10488-107B2;0.081295!10196-103E7;0.803767!10071-101I8;0.902229!10071-101I8;0.839113!10041-101F5;0.290465!10451-106G1;0.849982!10450-106F9;0.378166!10604-108F1;0.299376!10605-108F2;0.591302!10606-108F3;0.325007!10603-108E9;0.52411!10497-107C2;0.633695!10448-106F7;0.772293!10643-109A4;0.676363!10426-106D3;0.25165!10431-106D8;0.558773!10197-103E8;0.0878208!10443-106F2;0.428242!10815-111B5;0.471112!10816-111B6;0.32872!10817-111B7;0.182194!10015-101C6;0.324366!10410-106B5;0.70584!10054-101G9;0.54949!10758-110E2;0.953399!10711-109H9;0.43896!10040-101F4;0.934902!10470-106I2;0.93737!10415-106C1;0.108975!10198-103E9;0.541673!10614-108G2;0.679285!10612-108F9;0.375527!10549-107H9;0.62646!10615-108G3;0.154838!10487-107B1;0.838038!10433-106E1;0.955891!10688-109F4;0.903992!10444-106F3;0.217915!10444-106F3;0.906924!10485-107A8;0.962251!10413-106B8;0.217567!10175-103C4;0.383262!10161-103A8;0.711308!12131-128D7;0.508503!10624-108H3;0.498305!10712-109I1;0.290727!10205-103F7;0.820125!10206-103F8;0.53957!10207-103F9;0.357011!10050-101G5;0.647598!10051-101G6;0.683138!10016-101C7;0.57305!10046-101G1;0.428883!10778-110G4;0.945705!10633-108I3;0.33056!10818-111B8;0.17018!10819-111B9;0.551137!10820-111C1;0.601103!10484-107A7;0.555826!10808-111A7;0.601233!10169-103B7;0.9371!10153-102I9;0.855811!13425-144D5;0.697246!13433-144E4;0.0933481!13437-144E8;0.191582!11904-125F5;0.276568!11905-125F6;0.322625!10039-101F3;0.198026!10791-110H8;0.803926!10017-101C8;0.611523!10045-101F9;0.579711!10509-107D5;0.579629!10839-111E2;0.660554!10692-109F8;0.746478!10079-102A7;0.185294!10078-102A6;0.631273!10721-110A1;0.386352!10569-108B2;0.327662!10570-108B3;0.0248864!10571-108B4;0.0391009!10647-109A8;0.0236639!10752-110D5;0.619841!10782-110G8;0.657827!10726-110A6;0.419382!10018-101C9;0.0202765!10086-102B5;0.433867!10182-103D2;0.368065!10165-103B3;0.694428!10499-107C4;0.727082!10408-106B3;0.231285!10019-101D1;0.405888!10068-101I5;0.925428!10075-102A3;0.831978!10077-102A5;0.925263!10727-110A7;0.958883!10775-110G1;0.623089!10412-106B7;0.777617!12231-129F8;0.324481!12232-129F9;0.453747!12233-129G1;0.419346!12234-129G2;0.719054!10414-106B9;0.647357!10170-103B8;0.0985551!10183-103D3;0.984174!10150-102I6;0.956752!10174-103C3;0.916593!10155-103A2;0.709535!10038-101F2;0.748264!10838-111E1;0.782802!10759-110E3;0.209622!10514-107E1;0.0607707!10465-106H6;0.00887243!10691-109F7;0.0182698!10843-111E6;0.565635!10844-111E7;0.429106!11747-123G1;0.219631!11748-123G2;0.0305051!11749-123G3;0.0520482!11750-123G4;0.0137523!11751-123G5;0.0957898!11840-124H4;0.0225631!11752-123G6;0.0098661!11753-123G7;0.0904545!11754-123G8;0.0589021!11755-123G9;0.294117!11756-123H1;0.189214!11833-124G6;0.204684!11760-123H5;0.162142!11836-124G9;0.210809!11758-123H3;0.071897!11835-124G8;0.0418251!11762-123H7;0.167576!11838-124H2;0.375846!11757-123H2;0.413493!11759-123H4;0.0736764!11761-123H6;0.0883056!11842-124H6;0.347995!11837-124H1;0.119897!10568-108B1;0.209689!13230-141I8;0.720041!13231-141I9;0.0759285!10696-109G3;0.0546373!10493-107B7;0.272562!10494-107B8;0.247692!10850-111F4;0.0441107!10851-111F5;0.812682!10852-111F6;0.715116!10853-111F7;0.503246!10854-111F8;0.940996!10855-111F9;0.607643!10856-111G1;0.500073!10847-111F1;0.275715!10846-111E9;0.170829!10848-111F2;0.553944!10845-111E8;0.812013!10857-111G2;0.822244!10858-111G3;0.856906!10156-103A3;0.912394!11901-125F2;0.773927!11902-125F3;0.0653292!11903-125F4;0.0871167!10689-109F5;0.207108!10648-109A9;0.31494!10784-110H1;0.392831!10744-110C6;0.801229!10772-110F7;0.611869!10474-106I6;0.966605!10600-108E6;0.47091!10684-109E9;0.487644!12226-129F3;0.953189!12227-129F4;0.683058!10508-107D4;0.914237!10539-107G8;0.717372!10607-108F4;0.853388!10555-107I6;0.183612!10774-110F9;0.670153!10637-108I7;0.456697!10663-109C6;0.600401!10728-110A8;0.311104!10729-110A9;0.0521924!10430-106D7;0.123796!10730-110B1;0.47629!10813-111B3;0.424972!10812-111B2;0.656014!10037-101F1;0.404547!10172-103C1;0.88103!10163-103B1;0.907755!10076-102A4;0.736129!10073-102A1;0.893318!10036-101E9;0.316599!10195-103E6;0.811375!10277-104E7;0.774658!10434-106E2;0.283031!10550-107I1;0.478656!10545-107H5;0.457583!10544-107H4;0.787535!10704-109H2;0.740807!10510-107D6;0.747823!10558-107I9;0.96757!10020-101D2;0.0679801!10732-110B3;0.69829!10049-101G4;0.728707!10698-109G5;0.110807!10437-106E5;0.710026!10417-106C3;0.934226!10035-101E8;0.156833!10171-103B9;0.933229!10157-103A4;0.865158!10034-101E7;0.831176!10072-101I9;0.895224!10199-103F1;0.231481!10200-103F2;0.117656!10697-109G4;0.490977!10723-110A3;0.974975!10179-103C8;0.654058!10160-103A7;0.921907!10180-103C9;0.950162!10162-103A9;0.690766!10021-101D3;0.708147!10840-111E3;0.872589!10706-109H4;0.151364!10033-101E6;0.917064!10032-101E5;0.999634!10490-107B4;0.841671!10439-106E7;0.159742!10022-101D4;0.250902!10176-103C5;0.890043!10469-106I1;0.763971!10067-101I4;0.195687!10411-106B6;0.785803!10471-106I3;0.665077!10030-101E3;0.494078!10475-106I7;0.857899!10787-110H4;0.17225!10477-106I9;0.394307!10695-109G2;0.857438!11771-123I7;0.477035!11772-123I8;0.0955697!11773-123I9;0.191274!10093-102C3;0.913324!10442-106F1;0.406532!10442-106F1;0.558038!10201-103F3;0.724055!10639-108I9;0.926974!11843-124H7;0.0331748!11841-124H5;0.534982!10693-109F9;0.534108!10436-106E4;0.0954684!10483-107A6;0.406504!10282-104F3;0.737215!10023-101D5;0.279652!10066-101I3;0.279872!10065-101I2;0.619751!10800-110I8;0.977029!10610-108F7;0.0949703!10841-111E4;0.0862403!10541-107H1;0.171535!10842-111E5;0.192795!10562-108A4;0.622856!10024-101D6;0.168591!10064-101I1;0.400177!10609-108F6;0.565314!10048-101G3;0.174397!10781-110G7;0.856821!10181-103D1;0.493437!10159-103A6;0.621545!10056-101H2;0.731268!10737-110B8;0.659573!10025-101D7;0.307945!10044-101F8;0.840918!10424-106D1;0.667343!10463-106H4;0.561383!10616-108G4;0.859159!10486-107A9;0.879586!10062-101H8;0.741977!10202-103F4;0.820955!10158-103A5;0.377296!10441-106E9;0.604878!10031-101E4;0.22103!10063-101H9;0.737752!10063-101H9;0.220452!11763-123H8;0.672603!11765-123I1;0.114415!11768-123I4;0.14318!10807-111A6;0.100885!10790-110H7;0.15045!10798-110I6;0.245085!10786-110H3;0.144378!10591-108D6;0.355843!10593-108D8;0.694491!10590-108D5;0.79472!10026-101D8;0.380982!10096-102C6;0.775205!10168-103B6;0.0849448!10154-103A1;0.733549!10209-103G2;0.597393!10061-101H7;0.539195!10027-101D9;0.887964!10043-101F7;0.237554!10783-110G9;0.210881!10028-101E1;0.728462!10060-101H6;0.818026!10203-103F5;0.264345!10059-101H5;0.490968!10047-101G2;0.543805!10029-101E2;0.965819!10058-101H4;0.598816!10418-106C4;0.475883!10492-107B6;0.293498!10694-109G1;0.185026!10797-110I5;0.742603!10057-101H3;0.566997!10100-102D1;0.795522!10055-101H1;0.847954!10204-103F6;0.85809!10191-103E2;0.876025!10563-108A5;0.916505
|name=TCCTATTG,motif697,CNhs10649,T:1266.0(34.94%),B:17576.5(26.41%),P:1e-29
|name=TCCTATTG,motif697,CNhs10649,T:1266.0(34.94%),B:17576.5(26.41%),P:1e-29
|tomtom_result=br_Z2#MA0011.1;0;0.0034113;1.62378;1;8;TCCTATTG;TACTATTT;+!RME1#MA0370.1;1;0.00516644;2.45923;1;8;TCCTATTG;TTCCTTTGGA;-!AFT1#MA0269.1;2;0.0148419;7.06473;1;8;TCCTATTG;TTACATATTGCACCCGATTGG;+!D#MA00445.1;-1;0.0150177;7.14844;1;7;TCCTATTG;TCCATTGTTCT;+!HAP5#MA0316.1;5;0.0189429;9.01684;1;8;TCCTATTG;TGGGATCTGATTGGT;+!HAP3#MA0314.1;0;0.0198966;9.47078;1;8;TCCTATTG;TCTGATTGGTTCAGA;+!YER130C#MA0423.1;2;0.0205192;9.76714;1;7;TCCTATTG;ACCCCTATT;+
}}
}}

Latest revision as of 13:57, 7 September 2012

Full Name: TCCTATTG,motif697,CNhs10649,T:1266.0(34.94%),B:17576.5(26.41%),P:1e-29

Motif matrix
POACGT
11.266206.3581.2661057.11
2105.078825.432169.644165.846
31.2661262.2021.2661.266
41.26656.97279.786927.978
51128.0061.2661.266135.462
6158.251.266253.2853.284
71.266203.826330.426730.482
8194.964200.028869.7421.266

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
br_Z2#MA0011.100.00341131.6237818TCCTATTGTACTATTT+
RME1#MA0370.110.005166442.4592318TCCTATTGTTCCTTTGGA-
AFT1#MA0269.120.01484197.0647318TCCTATTGTTACATATTGCACCCGATTGG+
D#MA00445.1-10.01501777.1484417TCCTATTGTCCATTGTTCT+
HAP5#MA0316.150.01894299.0168418TCCTATTGTGGGATCTGATTGGT+
HAP3#MA0314.100.01989669.4707818TCCTATTGTCTGATTGGTTCAGA+
YER130C#MA0423.120.02051929.7671417TCCTATTGACCCCTATT+
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