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MacroAPE 1083:Motif953: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;8189;126696;13848;0!02;0;148733;0;0!03;0;148733;0;0!04;0;0;0;148733!05;5868;46384;21505;74976!06;0;0;0;148733 |macroape_1083_sample_pvalue...")
 
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11F4;0.775548!10851-111F5;0.655162!10852-111F6;0.861094!10853-111F7;0.926421!10854-111F8;0.88442!10855-111F9;0.529472!10856-111G1;0.990764!10847-111F1;0.880007!10846-111E9;0.362227!10848-111F2;0.470896!10845-111E8;0.293648!10857-111G2;0.996686!10858-111G3;0.964976!10156-103A3;0.802925!11901-125F2;0.315087!11902-125F3;0.238406!11903-125F4;0.285966!10689-109F5;0.285806!10648-109A9;0.856517!10784-110H1;0.807435!10744-110C6;0.667415!10772-110F7;0.359386!10474-106I6;0.297326!10600-108E6;0.508784!10684-109E9;0.942121!12226-129F3;0.8131!12227-129F4;0.722265!10508-107D4;0.535515!10539-107G8;0.613623!10607-108F4;0.654073!10555-107I6;0.516185!10774-110F9;0.727973!10637-108I7;0.868309!10663-109C6;0.79471!10728-110A8;0.570338!10729-110A9;0.649184!10430-106D7;0.509757!10730-110B1;0.322195!10813-111B3;0.59181!10812-111B2;0.248786!10037-101F1;0.367377!10172-103C1;0.279559!10163-103B1;0.248094!10076-102A4;0.320042!10073-102A1;0.276521!10036-101E9;0.333631!10195-103E6;0.265964!10277-104E7;0.303652!10434-106E2;0.23545!10550-107I1;0.993158!10545-107H5;0.950842!10544-107H4;0.372605!10704-109H2;0.585692!10510-107D6;0.843361!10558-107I9;0.929134!10020-101D2;0.502052!10732-110B3;0.694324!10049-101G4;0.96181!10698-109G5;0.404257!10437-106E5;0.99489!10417-106C3;0.426306!10035-101E8;0.814262!10171-103B9;0.269362!10157-103A4;0.21108!10034-101E7;0.294115!10072-101I9;0.273333!10199-103F1;0.293606!10200-103F2;0.954127!10697-109G4;0.430922!10723-110A3;0.715947!10179-103C8;0.339993!10160-103A7;0.230423!10180-103C9;0.363487!10162-103A9;0.390492!10021-101D3;0.478671!10840-111E3;0.85389!10706-109H4;0.350551!10033-101E6;0.580385!10032-101E5;0.273113!10490-107B4;0.257874!10439-106E7;0.927004!10022-101D4;0.676813!10176-103C5;0.683764!10469-106I1;0.26251!10067-101I4;0.91065!10411-106B6;0.525277!10471-106I3;0.85724!10030-101E3;0.694091!10475-106I7;0.34445!10787-110H4;0.602028!10477-106I9;0.964887!10695-109G2;0.481985!11771-123I7;0.41703!11772-123I8;0.493237!11773-123I9;0.340418!10093-102C3;0.44091!10442-106F1;0.910043!10442-106F1;0.5685!10201-103F3;0.583935!10639-108I9;0.78724!11843-124H7;0.854315!11841-124H5;0.732385!10693-109F9;0.460654!10436-106E4;0.769931!10483-107A6;0.75228!10282-104F3;0.65557!10023-101D5;0.126929!10066-101I3;0.212814!10065-101I2;0.45024!10800-110I8;0.491973!10610-108F7;0.879286!10841-111E4;0.293278!10541-107H1;0.576933!10842-111E5;0.619658!10562-108A4;0.421185!10024-101D6;0.466856!10064-101I1;0.592296!10609-108F6;0.567677!10048-101G3;0.686004!10781-110G7;0.562269!10181-103D1;0.449985!10159-103A6;0.239271!10056-101H2;0.295346!10737-110B8;0.298648!10025-101D7;0.887856!10044-101F8;0.450809!10424-106D1;0.683988!10463-106H4;0.400062!10616-108G4;0.488015!10486-107A9;0.684067!10062-101H8;0.582653!10202-103F4;0.484857!10158-103A5;0.978106!10441-106E9;0.274033!10031-101E4;0.568122!10063-101H9;0.255238!10063-101H9;0.347528!11763-123H8;0.425102!11765-123I1;0.577497!11768-123I4;0.485992!10807-111A6;0.409322!10790-110H7;0.508168!10798-110I6;0.581651!10786-110H3;0.700586!10591-108D6;0.426767!10593-108D8;0.41095!10590-108D5;0.558683!10026-101D8;0.55934!10096-102C6;0.368152!10168-103B6;0.3088!10154-103A1;0.197965!10209-103G2;0.303568!10061-101H7;0.391004!10027-101D9;0.508955!10043-101F7;0.228636!10783-110G9;0.376374!10028-101E1;0.266859!10060-101H6;0.340588!10203-103F5;0.504603!10059-101H5;0.298277!10047-101G2;0.29708!10029-101E2;0.845936!10058-101H4;0.741111!10418-106C4;0.453718!10492-107B6;0.661981!10694-109G1;0.788121!10797-110I5;0.468639!10057-101H3;0.553882!10100-102D1;0.32337!10055-101H1;0.813808!10204-103F6;0.716933!10191-103E2;0.685758!10563-108A5;0.881941
|name=motif953
|name=motif953
|tomtom_result=Kr#MA0452.1;3;0.000859705;0.40922;0.818439;6;CCCTTT;TAACCCTTTTG;-!YER130C#MA0423.1;2;0.00192981;0.918588;0.918588;6;CCCTTT;ACCCCTATT;+!PPARG::RXRA#MA0065.2;2;0.00323162;1.53825;1;6;CCCTTT;TGACCTTTGCCCTAC;-!RME1#MA0370.1;1;0.00478812;2.27914;1;6;CCCTTT;TTCCTTTGGA;-!Dof3#MA0021.1;0;0.00647891;3.08396;1;6;CCCTTT;CGCTTT;-!GIS1#MA0306.1;2;0.00950838;4.52599;1;6;CCCTTT;ACCCCTAAA;+!HNF4A#MA0114.1;2;0.0151477;7.21032;1;6;CCCTTT;TGACCTTTGGCCT;-
}}
}}

Latest revision as of 14:04, 7 September 2012

Full Name: motif953

Motif matrix
POACGT
018189126696138480
02014873300
03014873300
04000148733
055868463842150574976
06000148733

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Kr#MA0452.130.0008597050.409220.8184396CCCTTTTAACCCTTTTG-
YER130C#MA0423.120.001929810.9185880.9185886CCCTTTACCCCTATT+
PPARG::RXRA#MA0065.220.003231621.5382516CCCTTTTGACCTTTGCCCTAC-
RME1#MA0370.110.004788122.2791416CCCTTTTTCCTTTGGA-
Dof3#MA0021.100.006478913.0839616CCCTTTCGCTTT-
GIS1#MA0306.120.009508384.5259916CCCTTTACCCCTAAA+
HNF4A#MA0114.120.01514777.2103216CCCTTTTGACCTTTGGCCT-
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