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MacroAPE 1083:GTACGRC,motif321: Difference between revisions

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6485!10493-107B7;0.417617!10494-107B8;0.862821!10850-111F4;0.594602!10851-111F5;0.56!10852-111F6;0.713473!10853-111F7;0.499796!10854-111F8;0.298926!10855-111F9;0.213928!10856-111G1;0.858074!10847-111F1;0.853167!10846-111E9;0.715372!10848-111F2;0.165229!10845-111E8;0.530482!10857-111G2;0.0498113!10858-111G3;0.288226!10156-103A3;0.718861!11901-125F2;0.317181!11902-125F3;0.831384!11903-125F4;0.888219!10689-109F5;0.880568!10648-109A9;0.802111!10784-110H1;0.0669088!10744-110C6;0.530059!10772-110F7;0.0633687!10474-106I6;0.196678!10600-108E6;0.201284!10684-109E9;0.84577!12226-129F3;0.884625!12227-129F4;0.793805!10508-107D4;0.28459!10539-107G8;0.98102!10607-108F4;0.701637!10555-107I6;0.627976!10774-110F9;0.789198!10637-108I7;0.440143!10663-109C6;0.80155!10728-110A8;0.607786!10729-110A9;0.924486!10430-106D7;0.0286456!10730-110B1;0.168207!10813-111B3;0.355181!10812-111B2;0.145835!10037-101F1;0.638071!10172-103C1;0.293475!10163-103B1;0.620811!10076-102A4;0.346634!10073-102A1;0.373027!10036-101E9;0.591634!10195-103E6;0.410237!10277-104E7;0.293487!10434-106E2;0.281982!10550-107I1;0.421962!10545-107H5;0.532636!10544-107H4;0.961124!10704-109H2;0.652449!10510-107D6;0.530351!10558-107I9;0.934073!10020-101D2;0.72883!10732-110B3;0.0531762!10049-101G4;0.786075!10698-109G5;0.504821!10437-106E5;0.300252!10417-106C3;0.441049!10035-101E8;0.85863!10171-103B9;0.408455!10157-103A4;0.386383!10034-101E7;0.393571!10072-101I9;0.429774!10199-103F1;0.451504!10200-103F2;0.302359!10697-109G4;0.0944335!10723-110A3;0.965736!10179-103C8;0.470742!10160-103A7;0.154587!10180-103C9;0.356579!10162-103A9;0.347803!10021-101D3;0.320054!10840-111E3;0.735941!10706-109H4;0.237501!10033-101E6;0.14038!10032-101E5;0.415888!10490-107B4;0.404001!10439-106E7;0.657331!10022-101D4;0.657353!10176-103C5;0.0654423!10469-106I1;0.245653!10067-101I4;0.305771!10411-106B6;0.0857992!10471-106I3;0.240041!10030-101E3;0.40814!10475-106I7;0.138867!10787-110H4;0.317456!10477-106I9;0.604227!10695-109G2;0.261675!11771-123I7;0.0602003!11772-123I8;0.420072!11773-123I9;0.781083!10093-102C3;0.398412!10442-106F1;0.319289!10442-106F1;0.758886!10201-103F3;0.664983!10639-108I9;0.240938!11843-124H7;0.853844!11841-124H5;0.0927037!10693-109F9;0.177567!10436-106E4;0.440094!10483-107A6;0.48597!10282-104F3;0.128347!10023-101D5;0.454919!10066-101I3;0.592267!10065-101I2;0.223213!10800-110I8;0.140226!10610-108F7;0.266106!10841-111E4;0.482625!10541-107H1;0.431218!10842-111E5;0.48764!10562-108A4;0.495265!10024-101D6;0.61252!10064-101I1;0.193121!10609-108F6;0.12765!10048-101G3;0.145294!10781-110G7;0.0153175!10181-103D1;0.623411!10159-103A6;0.28936!10056-101H2;0.449855!10737-110B8;0.251853!10025-101D7;0.0255389!10044-101F8;0.0640273!10424-106D1;0.263195!10463-106H4;0.121876!10616-108G4;0.91822!10486-107A9;0.893943!10062-101H8;0.210951!10202-103F4;0.0763984!10158-103A5;0.0711909!10441-106E9;0.40253!10031-101E4;0.893496!10063-101H9;0.351474!10063-101H9;0.448204!11763-123H8;0.141323!11765-123I1;0.224824!11768-123I4;0.313166!10807-111A6;0.0923993!10790-110H7;0.479763!10798-110I6;0.196077!10786-110H3;0.391887!10591-108D6;0.415267!10593-108D8;0.656593!10590-108D5;0.32343!10026-101D8;0.44337!10096-102C6;0.293538!10168-103B6;0.852662!10154-103A1;0.731581!10209-103G2;0.33346!10061-101H7;0.18555!10027-101D9;0.143382!10043-101F7;0.904565!10783-110G9;0.510988!10028-101E1;0.188735!10060-101H6;0.13615!10203-103F5;0.0688969!10059-101H5;0.186972!10047-101G2;0.330089!10029-101E2;0.185964!10058-101H4;0.287089!10418-106C4;0.148269!10492-107B6;0.229075!10694-109G1;0.349954!10797-110I5;0.0962641!10057-101H3;0.0226839!10100-102D1;0.219021!10055-101H1;0.0518582!10204-103F6;0.0646421!10191-103E2;0.0707429!10563-108A5;0.103737
|name=GTACGRC,motif321,CNhs13817,T:1591.0(40.91%),B:23921.6(31.27%),P:1e-36
|name=GTACGRC,motif321,CNhs13817,T:1591.0(40.91%),B:23921.6(31.27%),P:1e-36
|tomtom_result=STP2#MA0395.1;5;0.00423189;2.01438;1;7;GTACGGC;TCGTCGTGCGGCGCCGATCA;-!UPC2#MA0411.1;1;0.0190608;9.07294;1;6;GTACGGC;TATACGA;+
}}
}}

Latest revision as of 14:11, 7 September 2012

Full Name: GTACGRC,motif321,CNhs13817,T:1591.0(40.91%),B:23921.6(31.27%),P:1e-36

Motif matrix
POACGT
11.5911.5911586.2271.591
21.5911.5911.5911586.227
31245.753342.0651.5911.591
41.5911586.2271.5911.591
51.5911.5911586.2271.591
6693.6761.591894.1421.591
71.5911586.2271.5911.591

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
STP2#MA0395.150.004231892.0143817GTACGGCTCGTCGTGCGGCGCCGATCA-
UPC2#MA0411.110.01906089.0729416GTACGGCTATACGA+
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