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MacroAPE 1083:CCCGATCC,motif958: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;119.38;910.59;151.13;88.9!2;133.35;914.4;160.02;62.23!3;96.52;896.62;116.84;160.02!4;184.15;74.93;967.74;43.18!5;902.97;48.26;191.77;127!6;1...")
 
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84!10788-110H5;0.566847!10792-110H9;0.59231!10765-110E9;0.899995!10829-111D1;0.91983!10830-111D2;0.912324!10831-111D3;0.821927!10832-111D4;0.767938!10833-111D5;0.70685!10764-110E8;0.677221!10770-110F5;0.463304!10399-106A3;0.559968!10400-106A4;0.587475!10405-106A9;0.670495!10834-111D6;0.650082!10835-111D7;0.843153!10836-111D8;0.609373!10837-111D9;0.875274!10699-109G6;0.868919!10802-111A1;0.727966!10796-110I4;0.598242!10010-101C1;0.919568!10810-111A9;0.632454!10421-106C7;0.541888!10708-109H6;0.751093!12235-129G3;0.394639!12236-129G4;0.220685!12237-129G5;0.895875!10167-103B5;0.3547!10151-102I7;0.752181!10428-106D5;0.952846!10795-110I3;0.646126!10805-111A4;0.681896!10052-101G7;0.707697!10189-103D9;0.922102!10589-108D4;0.55336!10425-106D2;0.645497!10427-106D4;0.683638!10702-109G9;0.547396!10432-106D9;0.921831!10496-107C1;0.6918!10718-109I7;0.472534!10011-101C2;0.357289!10053-101G8;0.757841!10686-109F2;0.266645!10084-102B3;0.608539!10012-101C3;0.679441!10085-102B4;0.920792!10482-107A5;0.778388!10419-106C5;0.521663!10080-102A8;0.63606!10760-110E4;0.996053!10709-109H7;0.796012!10710-109H8;0.298304!10703-109H1;0.502822!10719-109I8;0.96684!10642-109A3;0.745958!10177-103C6;0.692315!10164-103B2;0.848053!10173-103C2;0.979708!10166-103B4;0.995147!10083-102B2;0.94269!10188-103D8;0.729082!10552-107I3;0.856323!10553-107I4;0.66693!10013-101C4;0.539442!10536-107G5;0.853431!10618-108G6;0.987187!10423-106C9;0.298824!10785-110H2;0.364386!12238-129G6;0.693461!12239-129G7;0.211655!12240-129G8;0.513218!10416-106C2;0.296108!10801-110I9;0.575795!10766-110F1;0.883052!10824-111C5;0.358037!10825-111C6;0.67442!10826-111C7;0.66787!10454-106G4;0.655139!10409-106B4;0.756702!10638-108I8;0.996322!10636-108I6;0.83437!10513-107D9;0.861617!10420-106C6;0.605629!10082-102B1;0.548697!10014-101C5;0.908167!10070-101I7;0.618256!10452-106G2;0.874549!10453-106G3;0.200672!10449-106F8;0.303149!10042-101F6;0.320228!10069-101I6;0.781503!10193-103E4;0.857499!10631-108I1;0.953632!10438-106E6;0.647361!10488-107B2;0.514789!10196-103E7;0.74588!10071-101I8;0.641013!10071-101I8;0.816248!10041-101F5;0.919683!10451-106G1;0.977063!10450-106F9;0.988064!10604-108F1;0.974765!10605-108F2;0.485719!10606-108F3;0.683162!10603-108E9;0.954384!10497-107C2;0.574449!10448-106F7;0.534807!10643-109A4;0.823804!10426-106D3;0.900316!10431-106D8;0.56187!10197-103E8;0.706274!10443-106F2;0.841527!10815-111B5;0.637836!10816-111B6;0.602047!10817-111B7;0.656934!10015-101C6;0.669096!10410-106B5;0.740282!10054-101G9;0.779734!10758-110E2;0.944315!10711-109H9;0.919929!10040-101F4;0.553408!10470-106I2;0.961162!10415-106C1;0.910568!10198-103E9;0.82775!10614-108G2;0.983111!10612-108F9;0.472058!10549-107H9;0.711519!10615-108G3;0.890066!10487-107B1;0.643457!10433-106E1;0.806509!10688-109F4;0.513365!10444-106F3;0.57575!10444-106F3;0.387284!10485-107A8;0.483539!10413-106B8;0.914399!10175-103C4;0.763429!10161-103A8;0.970831!12131-128D7;0.874411!10624-108H3;0.981195!10712-109I1;0.311542!10205-103F7;0.758211!10206-103F8;0.699617!10207-103F9;0.69667!10050-101G5;0.64913!10051-101G6;0.919839!10016-101C7;0.907309!10046-101G1;0.820062!10778-110G4;0.72971!10633-108I3;0.783255!10818-111B8;0.867052!10819-111B9;0.794933!10820-111C1;0.793221!10484-107A7;0.8333!10808-111A7;0.934068!10169-103B7;0.51407!10153-102I9;0.998083!13425-144D5;0.951832!13433-144E4;0.362181!13437-144E8;0.29009!11904-125F5;0.344311!11905-125F6;0.671361!10039-101F3;0.835213!10791-110H8;0.957713!10017-101C8;0.964334!10045-101F9;0.789399!10509-107D5;0.933665!10839-111E2;0.687942!10692-109F8;0.714641!10079-102A7;0.690231!10078-102A6;0.981498!10721-110A1;0.982534!10569-108B2;0.497943!10570-108B3;0.657217!10571-108B4;0.81281!10647-109A8;0.614226!10752-110D5;0.338508!10782-110G8;0.939037!10726-110A6;0.982837!10018-101C9;0.187184!10086-102B5;0.881847!10182-103D2;0.593688!10165-103B3;0.947975!10499-107C4;0.92501!10408-106B3;0.64246!10019-101D1;0.446512!10068-101I5;0.914593!10075-102A3;0.484788!10077-102A5;0.821807!10727-110A7;0.725067!10775-110G1;0.363344!10412-106B7;0.512766!12231-129F8;0.349326!12232-129F9;0.783725!12233-129G1;0.631379!12234-129G2;0.55875!10414-106B9;0.37679!10170-103B8;0.84001!10183-103D3;0.890513!10150-102I6;0.935129!10174-103C3;0.953077!10155-103A2;0.949327!10038-101F2;0.991221!10838-111E1;0.91806!10759-110E3;0.846487!10514-107E1;0.978634!10465-106H6;0.662353!10691-109F7;0.720277!10843-111E6;0.546188!10844-111E7;0.704935!11747-123G1;0.890111!11748-123G2;0.588345!11749-123G3;0.37082!11750-123G4;0.54748!11751-123G5;0.609996!11840-124H4;0.53941!11752-123G6;0.676274!11753-123G7;0.738261!11754-123G8;0.414122!11755-123G9;0.330784!11756-123H1;0.52714!11833-124G6;0.689498!11760-123H5;0.88284!11836-124G9;0.279663!11758-123H3;0.187257!11835-124G8;0.384204!11762-123H7;0.803399!11838-124H2;0.198041!11757-123H2;0.529135!11759-123H4;0.89784!11761-123H6;0.664327!11842-124H6;0.416407!11837-124H1;0.392256!10568-108B1;0.672254!13230-141I8;0.528884!13231-141I9;0.878814!10696-109G3;0.963387!10493-107B7;0.397363!10494-107B8;0.775937!10850-111F4;0.371561!10851-111F5;0.94193!10852-111F6;0.602999!10853-111F7;0.487566!10854-111F8;0.492508!10855-111F9;0.509755!10856-111G1;0.718399!10847-111F1;0.560985!10846-111E9;0.991082!10848-111F2;0.732624!10845-111E8;0.639944!10857-111G2;0.598448!10858-111G3;0.43127!10156-103A3;0.677726!11901-125F2;0.995782!11902-125F3;0.466842!11903-125F4;0.734624!10689-109F5;0.876818!10648-109A9;0.933336!10784-110H1;0.574817!10744-110C6;0.730053!10772-110F7;0.413255!10474-106I6;0.615303!10600-108E6;0.437479!10684-109E9;0.467807!12226-129F3;0.930061!12227-129F4;0.536712!10508-107D4;0.815855!10539-107G8;0.942944!10607-108F4;0.698386!10555-107I6;0.85532!10774-110F9;0.915822!10637-108I7;0.90567!10663-109C6;0.975367!10728-110A8;0.794322!10729-110A9;0.84125!10430-106D7;0.973873!10730-110B1;0.466478!10813-111B3;0.323686!10812-111B2;0.422549!10037-101F1;0.917762!10172-103C1;0.957199!10163-103B1;0.854838!10076-102A4;0.900879!10073-102A1;0.935556!10036-101E9;0.910774!10195-103E6;0.842143!10277-104E7;0.957872!10434-106E2;0.983663!10550-107I1;0.57334!10545-107H5;0.50387!10544-107H4;0.645247!10704-109H2;0.575512!10510-107D6;0.948055!10558-107I9;0.4617!10020-101D2;0.214652!10732-110B3;0.795554!10049-101G4;0.60953!10698-109G5;0.860569!10437-106E5;0.218423!10417-106C3;0.248445!10035-101E8;0.717861!10171-103B9;0.996696!10157-103A4;0.872365!10034-101E7;0.951139!10072-101I9;0.968281!10199-103F1;0.964007!10200-103F2;0.950993!10697-109G4;0.915964!10723-110A3;0.467352!10179-103C8;0.897623!10160-103A7;0.65382!10180-103C9;0.943373!10162-103A9;0.776003!10021-101D3;0.748877!10840-111E3;0.480986!10706-109H4;0.295797!10033-101E6;0.76147!10032-101E5;0.991333!10490-107B4;0.894955!10439-106E7;0.619142!10022-101D4;0.878694!10176-103C5;0.770504!10469-106I1;0.988536!10067-101I4;0.724121!10411-106B6;0.719321!10471-106I3;0.78365!10030-101E3;0.312589!10475-106I7;0.964189!10787-110H4;0.681662!10477-106I9;0.999608!10695-109G2;0.986331!11771-123I7;0.558031!11772-123I8;0.507148!11773-123I9;0.459525!10093-102C3;0.915963!10442-106F1;0.80077!10442-106F1;0.665944!10201-103F3;0.635084!10639-108I9;0.63795!11843-124H7;0.73628!11841-124H5;0.258047!10693-109F9;0.385438!10436-106E4;0.685851!10483-107A6;0.88342!10282-104F3;0.690086!10023-101D5;0.493208!10066-101I3;0.721361!10065-101I2;0.564535!10800-110I8;0.963346!10610-108F7;0.975654!10841-111E4;0.45231!10541-107H1;0.56555!10842-111E5;0.635374!10562-108A4;0.860493!10024-101D6;0.707494!10064-101I1;0.537437!10609-108F6;0.822749!10048-101G3;0.920598!10781-110G7;0.845294!10181-103D1;0.334432!10159-103A6;0.991571!10056-101H2;0.855459!10737-110B8;0.76603!10025-101D7;0.930823!10044-101F8;0.967765!10424-106D1;0.851652!10463-106H4;0.516492!10616-108G4;0.522792!10486-107A9;0.807953!10062-101H8;0.919557!10202-103F4;0.696517!10158-103A5;0.833256!10441-106E9;0.917382!10031-101E4;0.762794!10063-101H9;0.897884!10063-101H9;0.942665!11763-123H8;0.996455!11765-123I1;0.793274!11768-123I4;0.821509!10807-111A6;0.863529!10790-110H7;0.425834!10798-110I6;0.740618!10786-110H3;0.286212!10591-108D6;0.89904!10593-108D8;0.730834!10590-108D5;0.74423!10026-101D8;0.772644!10096-102C6;0.560209!10168-103B6;0.334303!10154-103A1;0.891332!10209-103G2;0.911065!10061-101H7;0.866781!10027-101D9;0.975869!10043-101F7;0.704549!10783-110G9;0.228803!10028-101E1;0.178222!10060-101H6;0.776604!10203-103F5;0.834772!10059-101H5;0.776629!10047-101G2;0.944491!10029-101E2;0.738731!10058-101H4;0.76737!10418-106C4;0.982089!10492-107B6;0.873506!10694-109G1;0.985152!10797-110I5;0.452996!10057-101H3;0.139955!10100-102D1;0.87856!10055-101H1;0.639318!10204-103F6;0.83816!10191-103E2;0.651965!10563-108A5;0.631124
|name=CCCGATCC,motif958,CNhs12065,T:1270.0(44.20%),B:24777.2(34.39%),P:1e-27
|name=CCCGATCC,motif958,CNhs12065,T:1270.0(44.20%),B:24777.2(34.39%),P:1e-27
|tomtom_result=ASH1#MA0276.1;0;3.88036e-05;0.0184705;0.036941;8;CCCGATCC;CCCGATCCGG;-!TBS1#MA0404.1;-1;0.00353866;1.6844;1;7;CCCGATCC;CGGATCCG;+!RDS2#MA0362.1;1;0.00563919;2.68426;1;6;CCCGATCC;CCCCGAG;-!Tcfcp2l1#MA0145.1;4;0.0184874;8.8;1;8;CCCGATCC;CCAGTTCAAACCAG;+!Gata1#MA0035.1;-2;0.0206326;9.82113;1;6;CCCGATCC;CCATCC;-!IXR1#MA0323.1;1;0.0209311;9.9632;1;8;CCCGATCC;CCCCGCTTCCGGCTT;-
}}
}}

Latest revision as of 14:18, 7 September 2012

Full Name: CCCGATCC,motif958,CNhs12065,T:1270.0(44.20%),B:24777.2(34.39%),P:1e-27

Motif matrix
POACGT
1119.38910.59151.1388.9
2133.35914.4160.0262.23
396.52896.62116.84160.02
4184.1574.93967.7443.18
5902.9748.26191.77127
6119.3869.85104.14976.63
755.881088.3966.0459.69
862.23971.5580.01156.21

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
ASH1#MA0276.103.88036e-050.01847050.0369418CCCGATCCCCCGATCCGG-
TBS1#MA0404.1-10.003538661.684417CCCGATCCCGGATCCG+
RDS2#MA0362.110.005639192.6842616CCCGATCCCCCCGAG-
Tcfcp2l1#MA0145.140.01848748.818CCCGATCCCCAGTTCAAACCAG+
Gata1#MA0035.1-20.02063269.8211316CCCGATCCCCATCC-
IXR1#MA0323.110.02093119.963218CCCGATCCCCCCGCTTCCGGCTT-
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