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MacroAPE 1083:Motif1097: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;13507;0;142723;19212!02;0;165414;8342;1686!03;173922;1520;0;0!04;0;0;175442;0!05;32637;0;132863;9942!06;155170;14614;0;5658 |macroape_1083...")
 
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27161!10827-111C8;0.211118!10789-110H6;0.620541!10828-111C9;0.578609!10788-110H5;0.949699!10792-110H9;0.247123!10765-110E9;0.592639!10829-111D1;0.248022!10830-111D2;0.526871!10831-111D3;0.485222!10832-111D4;0.62209!10833-111D5;0.39709!10764-110E8;0.323083!10770-110F5;0.290577!10399-106A3;0.581518!10400-106A4;0.211643!10405-106A9;0.201591!10834-111D6;0.206976!10835-111D7;0.415466!10836-111D8;0.165147!10837-111D9;0.253619!10699-109G6;0.404713!10802-111A1;0.31645!10796-110I4;0.354217!10010-101C1;0.0577326!10810-111A9;0.271905!10421-106C7;0.0993659!10708-109H6;0.397484!12235-129G3;0.0662351!12236-129G4;0.815095!12237-129G5;0.650634!10167-103B5;0.594298!10151-102I7;0.624766!10428-106D5;0.53346!10795-110I3;0.333864!10805-111A4;0.514472!10052-101G7;0.0242673!10189-103D9;0.24769!10589-108D4;0.115943!10425-106D2;0.0345958!10427-106D4;0.0711217!10702-109G9;0.427057!10432-106D9;0.443249!10496-107C1;0.327538!10718-109I7;0.0845527!10011-101C2;0.353645!10053-101G8;0.2371!10686-109F2;0.0172197!10084-102B3;0.382728!10012-101C3;0.672232!10085-102B4;0.533036!10482-107A5;0.993841!10419-106C5;0.0601754!10080-102A8;0.0567995!10760-110E4;0.341753!10709-109H7;0.210624!10710-109H8;0.0820771!10703-109H1;0.0754367!10719-109I8;0.0101625!10642-109A3;0.0184449!10177-103C6;0.0517632!10164-103B2;0.642888!10173-103C2;0.592092!10166-103B4;0.992604!10083-102B2;0.799789!10188-103D8;0.817389!10552-107I3;0.514253!10553-107I4;0.162962!10013-101C4;0.0264111!10536-107G5;0.289229!10618-108G6;0.0493457!10423-106C9;0.112697!10785-110H2;0.0617569!12238-129G6;0.0667484!12239-129G7;0.364364!12240-129G8;0.652503!10416-106C2;0.177907!10801-110I9;0.441059!10766-110F1;0.53145!10824-111C5;0.630573!10825-111C6;0.133061!10826-111C7;0.127569!10454-106G4;0.122452!10409-106B4;0.097487!10638-108I8;0.395467!10636-108I6;0.202414!10513-107D9;0.263194!10420-106C6;0.020494!10082-102B1;0.0205823!10014-101C5;0.464598!10070-101I7;0.366452!10452-106G2;0.39699!10453-106G3;0.0926343!10449-106F8;0.17523!10042-101F6;0.170758!10069-101I6;0.530819!10193-103E4;0.415246!10631-108I1;0.588577!10438-106E6;0.314613!10488-107B2;0.144397!10196-103E7;0.0957912!10071-101I8;0.312797!10071-101I8;0.330567!10041-101F5;0.855896!10451-106G1;0.17213!10450-106F9;0.111857!10604-108F1;0.0850718!10605-108F2;0.252944!10606-108F3;0.133536!10603-108E9;0.192826!10497-107C2;0.272881!10448-106F7;0.141673!10643-109A4;0.112249!10426-106D3;0.258955!10431-106D8;0.146676!10197-103E8;0.173086!10443-106F2;0.252765!10815-111B5;0.0775111!10816-111B6;0.0979918!10817-111B7;0.08697!10015-101C6;0.104256!10410-106B5;0.268725!10054-101G9;0.0773931!10758-110E2;0.444083!10711-109H9;0.647975!10040-101F4;0.497312!10470-106I2;0.651677!10415-106C1;0.0440233!10198-103E9;0.232818!10614-108G2;0.181132!10612-108F9;0.124773!10549-107H9;0.0600981!10615-108G3;0.0587548!10487-107B1;0.0700817!10433-106E1;0.18141!10688-109F4;0.511124!10444-106F3;0.230259!10444-106F3;0.544776!10485-107A8;0.629246!10413-106B8;0.0988828!10175-103C4;0.225729!10161-103A8;0.547206!12131-128D7;0.447437!10624-108H3;0.582342!10712-109I1;0.94693!10205-103F7;0.540634!10206-103F8;0.315024!10207-103F9;0.319496!10050-101G5;0.221795!10051-101G6;0.54158!10016-101C7;0.415573!10046-101G1;0.362283!10778-110G4;0.476563!10633-108I3;0.185202!10818-111B8;0.0553071!10819-111B9;0.0383443!10820-111C1;0.0409708!10484-107A7;0.0368099!10808-111A7;0.0235135!10169-103B7;0.449833!10153-102I9;0.570637!13425-144D5;0.496021!13433-144E4;0.0107863!13437-144E8;0.00912484!11904-125F5;0.0113489!11905-125F6;0.365143!10039-101F3;0.319085!10791-110H8;0.633938!10017-101C8;0.11938!10045-101F9;0.313957!10509-107D5;0.491745!10839-111E2;0.240726!10692-109F8;0.316202!10079-102A7;0.0299595!10078-102A6;0.229577!10721-110A1;0.325525!10569-108B2;0.0528944!10570-108B3;0.232932!10571-108B4;0.184862!10647-109A8;0.145373!10752-110D5;0.267766!10782-110G8;0.360783!10726-110A6;0.507411!10018-101C9;0.214849!10086-102B5;0.909554!10182-103D2;0.478899!10165-103B3;0.529108!10499-107C4;0.46929!10408-106B3;0.087411!10019-101D1;0.184018!10068-101I5;0.169631!10075-102A3;0.217119!10077-102A5;0.11889!10727-110A7;0.00983418!10775-110G1;0.366176!10412-106B7;0.614885!12231-129F8;0.374106!12232-129F9;0.674073!12233-129G1;0.936776!12234-129G2;0.7256!10414-106B9;0.258034!10170-103B8;0.0719295!10183-103D3;0.66516!10150-102I6;0.621936!10174-103C3;0.494618!10155-103A2;0.530466!10038-101F2;0.467132!10838-111E1;0.451141!10759-110E3;0.0142681!10514-107E1;0.210136!10465-106H6;0.179401!10691-109F7;0.330426!10843-111E6;0.553802!10844-111E7;0.00942038!11747-123G1;0.0119635!11748-123G2;0.327835!11749-123G3;0.433264!11750-123G4;0.135196!11751-123G5;0.285107!11840-124H4;0.350932!11752-123G6;0.38991!11753-123G7;0.596625!11754-123G8;0.137441!11755-123G9;0.0812557!11756-123H1;0.247008!11833-124G6;0.0253714!11760-123H5;0.413967!11836-124G9;0.106689!11758-123H3;0.0588661!11835-124G8;0.120867!11762-123H7;0.0744494!11838-124H2;0.187591!11757-123H2;0.098442!11759-123H4;0.106349!11761-123H6;0.128909!11842-124H6;0.0401483!11837-124H1;0.158105!10568-108B1;0.0903886!13230-141I8;0.725144!13231-141I9;0.249791!10696-109G3;0.275895!10493-107B7;0.846133!10494-107B8;0.114052!10850-111F4;0.0431715!10851-111F5;0.14052!10852-111F6;0.292716!10853-111F7;0.989295!10854-111F8;0.10623!10855-111F9;0.128691!10856-111G1;0.308288!10847-111F1;0.16675!10846-111E9;0.941697!10848-111F2;0.203085!10845-111E8;0.370374!10857-111G2;0.207488!10858-111G3;0.0766208!10156-103A3;0.323014!11901-125F2;0.517444!11902-125F3;0.585401!11903-125F4;0.38227!10689-109F5;0.490514!10648-109A9;0.0716973!10784-110H1;0.0250772!10744-110C6;0.187936!10772-110F7;0.512339!10474-106I6;0.346536!10600-108E6;0.551012!10684-109E9;0.217103!12226-129F3;0.475918!12227-129F4;0.117799!10508-107D4;0.36892!10539-107G8;0.0381937!10607-108F4;0.0453821!10555-107I6;0.0315461!10774-110F9;0.0446254!10637-108I7;0.0383883!10663-109C6;0.0779761!10728-110A8;0.0439892!10729-110A9;0.04069!10430-106D7;0.366824!10730-110B1;0.106713!10813-111B3;0.034875!10812-111B2;0.463986!10037-101F1;0.176121!10172-103C1;0.621778!10163-103B1;0.702103!10076-102A4;0.494878!10073-102A1;0.59316!10036-101E9;0.879931!10195-103E6;0.674874!10277-104E7;0.558197!10434-106E2;0.493047!10550-107I1;0.0814608!10545-107H5;0.0769199!10544-107H4;0.495157!10704-109H2;0.234395!10510-107D6;0.842443!10558-107I9;0.208277!10020-101D2;0.0747452!10732-110B3;0.393285!10049-101G4;0.244402!10698-109G5;0.852404!10437-106E5;0.0628929!10417-106C3;0.459046!10035-101E8;0.0740616!10171-103B9;0.668396!10157-103A4;0.622747!10034-101E7;0.538761!10072-101I9;0.636337!10199-103F1;0.864691!10200-103F2;0.0683981!10697-109G4;0.312287!10723-110A3;0.0570725!10179-103C8;0.159505!10160-103A7;0.824712!10180-103C9;0.782557!10162-103A9;0.876449!10021-101D3;0.787641!10840-111E3;0.254405!10706-109H4;0.286586!10033-101E6;0.321118!10032-101E5;0.529922!10490-107B4;0.657224!10439-106E7;0.0460091!10022-101D4;0.118545!10176-103C5;0.272874!10469-106I1;0.641978!10067-101I4;0.0382053!10411-106B6;0.438547!10471-106I3;0.552658!10030-101E3;0.222162!10475-106I7;0.489576!10787-110H4;0.00617951!10477-106I9;0.0201348!10695-109G2;0.0289108!11771-123I7;0.555708!11772-123I8;0.177316!11773-123I9;0.110426!10093-102C3;0.366759!10442-106F1;0.127379!10442-106F1;0.433703!10201-103F3;0.507306!10639-108I9;0.241599!11843-124H7;0.099495!11841-124H5;0.143677!10693-109F9;0.192384!10436-106E4;0.123829!10483-107A6;0.10999!10282-104F3;0.114458!10023-101D5;0.613887!10066-101I3;0.673824!10065-101I2;0.461977!10800-110I8;0.315621!10610-108F7;0.020271!10841-111E4;0.0117804!10541-107H1;0.0548613!10842-111E5;0.0491668!10562-108A4;0.00945271!10024-101D6;0.152064!10064-101I1;0.380851!10609-108F6;0.466155!10048-101G3;0.177601!10781-110G7;0.274723!10181-103D1;0.105707!10159-103A6;0.462525!10056-101H2;0.416658!10737-110B8;0.563884!10025-101D7;0.275689!10044-101F8;0.0180608!10424-106D1;0.0765652!10463-106H4;0.329187!10616-108G4;0.11899!10486-107A9;0.381017!10062-101H8;0.186604!10202-103F4;0.377108!10158-103A5;0.102089!10441-106E9;0.383257!10031-101E4;0.0313024!10063-101H9;0.644642!10063-101H9;0.986765!11763-123H8;0.317435!11765-123I1;0.201851!11768-123I4;0.265172!10807-111A6;0.123518!10790-110H7;0.0218466!10798-110I6;0.0191758!10786-110H3;0.0345957!10591-108D6;0.0324127!10593-108D8;0.0384233!10590-108D5;0.0551923!10026-101D8;0.0463055!10096-102C6;0.725271!10168-103B6;0.0538147!10154-103A1;0.579429!10209-103G2;0.487577!10061-101H7;0.257189!10027-101D9;0.380187!10043-101F7;0.218556!10783-110G9;0.142565!10028-101E1;0.228135!10060-101H6;0.414332!10203-103F5;0.403812!10059-101H5;0.325001!10047-101G2;0.424301!10029-101E2;0.0803099!10058-101H4;0.173745!10418-106C4;0.333877!10492-107B6;0.100175!10694-109G1;0.0949335!10797-110I5;0.547157!10057-101H3;0.144269!10100-102D1;0.322947!10055-101H1;0.296809!10204-103F6;0.391802!10191-103E2;0.296048!10563-108A5;0.110687
|name=motif1097
|name=motif1097
|tomtom_result=SOK2#MA0385.1;4;0.00387023;1.84223;1;6;GCAGGA;ACCTGCAGGCA;+!FEV#MA0156.1;-1;0.00528319;2.5148;1;5;GCAGGA;CAGGAAAT;+!UGA3#MA0410.1;2;0.0118299;5.63104;1;6;GCAGGA;CGGCGGGA;+!TEAD1#MA0090.1;1;0.0142356;6.77613;1;6;GCAGGA;CGGAGGAATGTG;-!PHD1#MA0355.1;4;0.0204911;9.75377;1;6;GCAGGA;TGCTGCAGGT;-
}}
}}

Latest revision as of 14:26, 7 September 2012

Full Name: motif1097

Motif matrix
POACGT
0113507014272319212
02016541483421686
03173922152000
04001754420
053263701328639942
061551701461405658

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
SOK2#MA0385.140.003870231.8422316GCAGGAACCTGCAGGCA+
FEV#MA0156.1-10.005283192.514815GCAGGACAGGAAAT+
UGA3#MA0410.120.01182995.6310416GCAGGACGGCGGGA+
TEAD1#MA0090.110.01423566.7761316GCAGGACGGAGGAATGTG-
PHD1#MA0355.140.02049119.7537716GCAGGATGCTGCAGGT-
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