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MacroAPE 1083:CNhs12623 bl f2: Difference between revisions

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6158!11761-123H6;0.395663!11842-124H6;0.636679!11837-124H1;0.0329055!10568-108B1;0.289418!13230-141I8;0.363361!13231-141I9;0.357076!10696-109G3;0.614288!10493-107B7;0.0139608!10494-107B8;0.116736!10850-111F4;0.125422!10851-111F5;0.594428!10852-111F6;0.138982!10853-111F7;0.879799!10854-111F8;0.958269!10855-111F9;0.970066!10856-111G1;0.0628395!10847-111F1;0.124808!10846-111E9;0.94713!10848-111F2;0.00202509!10845-111E8;0.0536765!10857-111G2;0.0921478!10858-111G3;0.198493!10156-103A3;0.266073!11901-125F2;0.0340641!11902-125F3;0.0754403!11903-125F4;0.0792948!10689-109F5;0.111756!10648-109A9;0.418657!10784-110H1;0.131119!10744-110C6;0.190492!10772-110F7;0.120881!10474-106I6;0.0872073!10600-108E6;0.444365!10684-109E9;0.785059!12226-129F3;0.92562!12227-129F4;0.778159!10508-107D4;0.0817726!10539-107G8;0.230393!10607-108F4;0.480256!10555-107I6;0.241437!10774-110F9;0.456399!10637-108I7;0.338056!10663-109C6;0.951363!10728-110A8;0.112316!10729-110A9;0.756815!10430-106D7;0.336932!10730-110B1;0.917359!10813-111B3;0.699146!10812-111B2;0.736308!10037-101F1;0.754379!10172-103C1;0.0305404!10163-103B1;0.0333799!10076-102A4;0.0245522!10073-102A1;0.105951!10036-101E9;0.00617193!10195-103E6;0.0657408!10277-104E7;0.0426785!10434-106E2;0.0272709!10550-107I1;0.157288!10545-107H5;0.153672!10544-107H4;0.253916!10704-109H2;0.157982!10510-107D6;0.237712!10558-107I9;0.664896!10020-101D2;0.07946!10732-110B3;0.67243!10049-101G4;0.773629!10698-109G5;0.0769944!10437-106E5;0.37539!10417-106C3;0.805086!10035-101E8;0.204774!10171-103B9;0.0497234!10157-103A4;0.0460487!10034-101E7;0.0223445!10072-101I9;0.0556406!10199-103F1;0.00190807!10200-103F2;0.165673!10697-109G4;0.78979!10723-110A3;0.543776!10179-103C8;0.154443!10160-103A7;0.0135311!10180-103C9;0.00290754!10162-103A9;0.110395!10021-101D3;0.0438432!10840-111E3;0.530785!10706-109H4;0.369144!10033-101E6;0.79015!10032-101E5;0.0228483!10490-107B4;0.0584267!10439-106E7;0.0714194!10022-101D4;0.0289344!10176-103C5;0.801163!10469-106I1;0.0306496!10067-101I4;0.214412!10411-106B6;0.323318!10471-106I3;0.00557454!10030-101E3;0.266524!10475-106I7;0.00839734!10787-110H4;0.654911!10477-106I9;0.213898!10695-109G2;0.272922!11771-123I7;0.36584!11772-123I8;0.735584!11773-123I9;0.35421!10093-102C3;0.23323!10442-106F1;0.652674!10442-106F1;0.029166!10201-103F3;0.0108316!10639-108I9;0.407359!11843-124H7;0.679955!11841-124H5;0.855797!10693-109F9;0.935721!10436-106E4;0.0845416!10483-107A6;0.219505!10282-104F3;0.0377554!10023-101D5;0.838781!10066-101I3;0.810213!10065-101I2;0.93881!10800-110I8;0.355854!10610-108F7;0.454109!10841-111E4;0.645475!10541-107H1;0.986708!10842-111E5;0.751131!10562-108A4;0.673209!10024-101D6;0.812803!10064-101I1;0.180593!10609-108F6;0.285283!10048-101G3;0.362601!10781-110G7;0.671463!10181-103D1;0.74075!10159-103A6;0.011551!10056-101H2;0.00399593!10737-110B8;0.0206273!10025-101D7;0.416682!10044-101F8;0.622444!10424-106D1;0.325542!10463-106H4;0.246444!10616-108G4;0.231352!10486-107A9;0.648933!10062-101H8;0.3819!10202-103F4;0.994407!10158-103A5;0.509755!10441-106E9;0.0214644!10031-101E4;0.559299!10063-101H9;0.0596769!10063-101H9;0.0147601!11763-123H8;0.164702!11765-123I1;0.706322!11768-123I4;0.611183!10807-111A6;0.870471!10790-110H7;0.277652!10798-110I6;0.27046!10786-110H3;0.175273!10591-108D6;0.255836!10593-108D8;0.345326!10590-108D5;0.247645!10026-101D8;0.406776!10096-102C6;0.988934!10168-103B6;0.972051!10154-103A1;0.0109296!10209-103G2;0.00825508!10061-101H7;0.908372!10027-101D9;0.492992!10043-101F7;0.919824!10783-110G9;0.257722!10028-101E1;0.261153!10060-101H6;0.884652!10203-103F5;0.490793!10059-101H5;0.795436!10047-101G2;0.980534!10029-101E2;0.431541!10058-101H4;0.595278!10418-106C4;0.502618!10492-107B6;0.546004!10694-109G1;0.533719!10797-110I5;0.641864!10057-101H3;0.201264!10100-102D1;0.990244!10055-101H1;0.34447!10204-103F6;0.432219!10191-103E2;0.621647!10563-108A5;0.534669
|name=CNhs12623_bl_f2
|name=CNhs12623_bl_f2
|tomtom_result=Pax5#MA0014.1;8;0.000669601;0.31873;0.637461;8;CATCAGTG;CCGCTACGCTTCAGTGCTCT;-!GAL4#MA0299.1;4;0.00375235;1.78612;1;8;CATCAGTG;CGGGGAACAGTACTC;+!SOX9#MA0077.1;0;0.0078779;3.74988;1;8;CATCAGTG;GAACAATGG;+!Gfi#MA0038.1;2;0.00997991;4.75044;1;8;CATCAGTG;CAAATCACTG;+!PBX1#MA0070.1;1;0.0133927;6.37492;1;8;CATCAGTG;CCATCAATCAAA;+!Pax6#MA0069.1;6;0.0140214;6.67419;1;8;CATCAGTG;TTCACGCATGAGTT;+!HAP4#MA0315.1;3;0.0179225;8.53109;1;8;CATCAGTG;ACCAATCAGAGGCGA;+!RUNX1#MA0002.2;3;0.0202703;9.64865;1;8;CATCAGTG;AAACCACAGAC;-!D#MA00445.1;1;0.0202703;9.64865;1;8;CATCAGTG;AGAACAATGGA;-
}}
}}

Latest revision as of 14:35, 7 September 2012

Full Name: CNhs12623_bl_f2

Motif matrix
POACGT
148.884653210756994159.7621418096374322.8102992353379935.95232450790394
2156.3545953967205877.1749123049288513.99926308206725919.880647979919786
398.5552093435937610.7642938059109887.096297574304138150.99361803982748
40.5008915309359484265.63132754841780.77630815334671370.5008915309359484
5265.78368801415890.54191024982584680.54191024982584680.5419102498258468
669.5556162889292451.63194931093764140.764967101237665.456886062531987
718.73273182219986770.9785399510217724.21636292228886153.48178406812607
857.35921910876399559.88678482712197123.4941661797039426.669248648046604

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Pax5#MA0014.180.0006696010.318730.6374618CATCAGTGCCGCTACGCTTCAGTGCTCT-
GAL4#MA0299.140.003752351.7861218CATCAGTGCGGGGAACAGTACTC+
SOX9#MA0077.100.00787793.7498818CATCAGTGGAACAATGG+
Gfi#MA0038.120.009979914.7504418CATCAGTGCAAATCACTG+
PBX1#MA0070.110.01339276.3749218CATCAGTGCCATCAATCAAA+
Pax6#MA0069.160.01402146.6741918CATCAGTGTTCACGCATGAGTT+
HAP4#MA0315.130.01792258.5310918CATCAGTGACCAATCAGAGGCGA+
RUNX1#MA0002.230.02027039.6486518CATCAGTGAAACCACAGAC-
D#MA00445.110.02027039.6486518CATCAGTGAGAACAATGGA-
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